Guide to the Human Genome
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Name: LRRC67 Sequence: fasta or formatted (228aa) NCBI GI: 61966709
Description:

leucine rich repeat containing 67

Referenced in:

Leucine-rich Repeat Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.6          6           1
 C cysteine            3.1          7           1
 D aspartate           5.7         13           2
 E glutamate           6.1         14           2
 F phenylalanine       1.3          3           1
 G glycine             3.5          8           2
 H histidine           2.2          5           1
 I isoleucine          8.3         19           1
 K lysine              7.9         18           2
 L leucine            21.5         49           2
 M methionine          0.9          2           1
 N asparagine         10.5         24           3
 P proline             2.2          5           1
 Q glutamine           2.6          6           1
 R arginine            3.9          9           1
 S serine              5.7         13           1
 T threonine           3.9          9           1
 V valine              3.5          8           1
 W tryptophan          0.4          1           1
 Y tyrosine            3.9          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine rich repeat containing 67 
PPP1R7                0.121   protein phosphatase 1, regulatory subunit 7 
LRRC50                0.119   leucine rich repeat containing 50 
LRRCC1                0.116   sodium channel associated protein 2 isoform a [Homo...
LRRC49                0.102   leucine rich repeat containing 49 
LRGUK                 0.086   leucine-rich repeats and guanylate kinase domain con...
CEP97                 0.079   centrosomal protein 97kDa 
SLITRK1               0.074   slit and trk like 1 protein 
CEP110                0.074   centrosomal protein 110kDa 
LRRIQ1                0.074   leucine-rich repeats and IQ motif containing 1 isof...
LRRIQ1                0.074   leucine-rich repeats and IQ motif containing 1 isof...
LRRN1                 0.067   leucine rich repeat neuronal 1 
LRFN1                 0.067   leucine rich repeat and fibronectin type III domain...
LRRC48                0.067   leucine rich repeat containing 48 isoform b 
LRRC48                0.067   leucine rich repeat containing 48 isoform b 
LRRC48                0.067   leucine rich repeat containing 48 isoform a 
LRRC48                0.067   leucine rich repeat containing 48 isoform a 
LRRN3                 0.063   leucine rich repeat neuronal 3 
LRRN3                 0.063   leucine rich repeat neuronal 3 
LRRN3                 0.063   leucine rich repeat neuronal 3 
LRRIQ4                0.063   leucine-rich repeats and IQ motif containing 4 [Hom...
LRRC30                0.063   leucine rich repeat containing 30 
LRRC46                0.060   leucine rich repeat containing 46 
DNAL1                 0.058   axonemal dynein light chain 1 
LRRC6                 0.058   leucine rich repeat containing 6 
FLII                  0.053   flightless I homolog 
LRRC1                 0.051   leucine rich repeat containing 1 
TLR3                  0.049   toll-like receptor 3 
LOC100129335          0.047   PREDICTED: Leucine-rich repeat-containing protein E...
LOC100129335          0.047   PREDICTED: Leucine-rich repeat-containing protein E...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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