LRRC50 6320

Name: LRRC50	Sequence: fasta or formatted (725aa)		NCBI GI: 157674358
Description: leucine rich repeat containing 50		Referenced in: Leucine-rich Repeat Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 49 2 C cysteine 2.1 15 1 D aspartate 7.4 54 3 E glutamate 12.1 88 2 F phenylalanine 2.1 15 1 G glycine 6.2 45 2 H histidine 1.7 12 1 I isoleucine 3.4 25 1 K lysine 5.7 41 2 L leucine 10.5 76 3 M methionine 1.5 11 1 N asparagine 3.0 22 2 P proline 9.4 68 6 Q glutamine 4.1 30 2 R arginine 5.4 39 2 S serine 6.8 49 2 T threonine 6.1 44 1 V valine 4.0 29 1 W tryptophan 0.6 4 1 Y tyrosine 1.2 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leucine rich repeat containing 50 LRRC49 0.046 leucine rich repeat containing 49 PPP1R7 0.044 protein phosphatase 1, regulatory subunit 7 CEP110 0.040 centrosomal protein 110kDa LRRC48 0.038 leucine rich repeat containing 48 isoform b LRRC48 0.038 leucine rich repeat containing 48 isoform b LRRC48 0.038 leucine rich repeat containing 48 isoform a LRRC48 0.038 leucine rich repeat containing 48 isoform a LRRC67 0.035 leucine rich repeat containing 67 LRRC46 0.035 leucine rich repeat containing 46 LRGUK 0.032 leucine-rich repeats and guanylate kinase domain con... LRRC6 0.031 leucine rich repeat containing 6 LOC654258 0.029 PREDICTED: similar to leucine rich repeat containin... LRRCC1 0.029 sodium channel associated protein 2 isoform a [Homo... OGFR 0.024 opioid growth factor receptor RABGGTA 0.024 Rab geranylgeranyltransferase alpha RABGGTA 0.024 Rab geranylgeranyltransferase alpha ANP32A 0.024 acidic (leucine-rich) nuclear phosphoprotein 32 famil... FLII 0.022 flightless I homolog ANP32B 0.022 acidic (leucine-rich) nuclear phosphoprotein 32 famil... CEP97 0.022 centrosomal protein 97kDa ANP32E 0.021 acidic (leucine-rich) nuclear phosphoprotein 32 fami... ENAH 0.021 enabled homolog isoform a ENAH 0.021 enabled homolog isoform b SMTNL1 0.020 smoothelin-like 1 RP1L1 0.020 retinitis pigmentosa 1-like 1 EIF5B 0.020 eukaryotic translation initiation factor 5B NEFH 0.019 neurofilament, heavy polypeptide 200kDa DNAL1 0.019 axonemal dynein light chain 1 SHOC2 0.019 soc-2 suppressor of clear homolog Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.