Guide to the Human Genome
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Name: TMEM132C Sequence: fasta or formatted (996aa) NCBI GI: 209870052
Description:

transmembrane protein 132C

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         65           2
 C cysteine            1.5         15           1
 D aspartate           6.1         61           2
 E glutamate           6.9         69           3
 F phenylalanine       2.9         29           1
 G glycine             7.6         76           2
 H histidine           2.3         23           2
 I isoleucine          4.3         43           2
 K lysine              5.6         56           2
 L leucine             8.7         87           3
 M methionine          1.4         14           1
 N asparagine          3.4         34           1
 P proline             5.2         52           3
 Q glutamine           4.7         47           1
 R arginine            5.7         57           2
 S serine              7.9         79           3
 T threonine           6.1         61           3
 V valine              9.5         95           3
 W tryptophan          1.5         15           1
 Y tyrosine            1.8         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 132C 
TMEM132D              0.585   transmembrane protein 132D 
TMEM132B              0.477   transmembrane protein 132B 
TMEM132A              0.250   transmembrane protein 132A isoform a 
TMEM132A              0.249   transmembrane protein 132A isoform b 
TMEM132E              0.237   transmembrane protein 132E 
LOC121296             0.068   PREDICTED: similar to TMEM132B protein 
LOC121296             0.068   PREDICTED: similar to TMEM132B protein 
LOC121296             0.068   PREDICTED: hypothetical protein 
AFF4                  0.005   ALL1 fused gene from 5q31 
BAP1                  0.004   BRCA1 associated protein-1 
PHF8                  0.003   PHD finger protein 8 
RORA                  0.003   RAR-related orphan receptor A isoform d 
RORA                  0.003   RAR-related orphan receptor A isoform c 
RORA                  0.003   RAR-related orphan receptor A isoform b 
RORA                  0.003   RAR-related orphan receptor A isoform a 
DDRGK1                0.003   DDRGK domain containing 1 
SVIL                  0.003   supervillin isoform 2 
EIF5B                 0.003   eukaryotic translation initiation factor 5B 
KIAA0564              0.003   hypothetical protein LOC23078 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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