Guide to the Human Genome
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Name: LRRN2 Sequence: fasta or formatted (713aa) NCBI GI: 42544231
Description:

leucine rich repeat neuronal 2

Referenced in:

Leucine-rich Repeat Family

Other entries for this name:
alt mRNA [713aa] leucine rich repeat neuronal 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         68           2
 C cysteine            2.0         14           1
 D aspartate           3.4         24           1
 E glutamate           5.5         39           2
 F phenylalanine       2.5         18           1
 G glycine             5.6         40           2
 H histidine           2.9         21           2
 I isoleucine          2.8         20           1
 K lysine              1.4         10           1
 L leucine            16.3        116           3
 M methionine          1.5         11           1
 N asparagine          5.0         36           3
 P proline             7.9         56           2
 Q glutamine           4.3         31           2
 R arginine            7.3         52           2
 S serine              6.5         46           2
 T threonine           5.3         38           2
 V valine              6.3         45           3
 W tryptophan          2.0         14           1
 Y tyrosine            2.0         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine rich repeat neuronal 2 
LRRN2                 1.000   leucine rich repeat neuronal 2 
LRRN1                 0.443   leucine rich repeat neuronal 1 
LRRN3                 0.433   leucine rich repeat neuronal 3 
LRRN3                 0.433   leucine rich repeat neuronal 3 
LRRN3                 0.433   leucine rich repeat neuronal 3 
LINGO3                0.113   leucine rich repeat and Ig domain containing 3 [Hom...
LINGO2                0.100   leucine rich repeat and Ig domain containing 2 [Homo...
LINGO1                0.100   leucine-rich repeat neuronal 6A 
LINGO4                0.097   leucine rich repeat and Ig domain containing 4 [Homo...
KIAA0644              0.080   hypothetical protein LOC9865 
LRRC15                0.077   leucine rich repeat containing 15 isoform a 
LRRC15                0.077   leucine rich repeat containing 15 isoform b 
LRFN5                 0.076   leucine rich repeat and fibronectin type III domain ...
IGFALS                0.074   insulin-like growth factor binding protein, acid la...
IGFALS                0.074   insulin-like growth factor binding protein, acid labi...
CPN2                  0.073   carboxypeptidase N, polypeptide 2, 83kD 
LRIG1                 0.073   leucine-rich repeats and immunoglobulin-like domains...
LRRC70                0.073   synleurin 
LRFN4                 0.071   leucine rich repeat and fibronectin type III domain ...
LRFN3                 0.070   leucine rich repeat and fibronectin type III domain ...
LGR5                  0.070   leucine-rich repeat-containing G protein-coupled rece...
LRFN1                 0.070   leucine rich repeat and fibronectin type III domain...
LRRC4C                0.069   netrin-G1 ligand 
LRIG3                 0.069   leucine-rich repeats and immunoglobulin-like domains...
LRIG3                 0.069   leucine-rich repeats and immunoglobulin-like domain...
LRIG2                 0.067   leucine-rich repeats and immunoglobulin-like domains ...
LGR4                  0.066   leucine-rich repeat-containing G protein-coupled re...
CHADL                 0.066   chondroadherin-like 
LGR6                  0.066   leucine-rich repeat-containing G protein-coupled rec...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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