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Search of human proteins with 30410724
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30410724 fucosyltransferase 8 isoform a [Homo sapiens]
(575 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30410728 fucosyltransferase 8 isoform a [Homo sapiens] 1194 0.0
gi|30410726 fucosyltransferase 8 isoform a [Homo sapiens] 1194 0.0
gi|30410724 fucosyltransferase 8 isoform a [Homo sapiens] 1194 0.0
gi|30410722 fucosyltransferase 8 isoform b [Homo sapiens] 867 0.0
gi|30410730 fucosyltransferase 8 isoform c [Homo sapiens] 328 8e-90
gi|166235148 osteoclast stimulating factor 1 [Homo sapiens] 50 7e-06
gi|222446607 SH3 domain containing ring finger 2 [Homo sapiens] 41 0.003
gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo sapi... 39 0.010
gi|150010572 SH3 domain containing ring finger 3 [Homo sapiens] 39 0.013
gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sap... 38 0.022
gi|67514036 SH3-domain kinase binding protein 1 isoform b [Homo ... 38 0.022
gi|13994242 SH3-domain kinase binding protein 1 isoform a [Homo ... 38 0.022
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 37 0.049
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 37 0.049
gi|51988887 SH3 domain containing ring finger 1 [Homo sapiens] 37 0.049
gi|78000171 sorbin and SH3 domain containing 1 isoform 7 [Homo s... 36 0.084
gi|78000169 sorbin and SH3 domain containing 1 isoform 6 [Homo s... 36 0.084
gi|78000167 sorbin and SH3 domain containing 1 isoform 5 [Homo s... 36 0.084
gi|78000165 sorbin and SH3 domain containing 1 isoform 4 [Homo s... 36 0.084
gi|78000163 sorbin and SH3 domain containing 1 isoform 3 [Homo s... 36 0.084
gi|7661700 sorbin and SH3 domain containing 1 isoform 2 [Homo sa... 36 0.084
gi|78000160 sorbin and SH3 domain containing 1 isoform 1 [Homo s... 36 0.084
gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo sapi... 36 0.084
gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo sap... 35 0.14
gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... 35 0.14
gi|166064036 PAK-interacting exchange factor beta isoform d [Hom... 35 0.14
gi|166064034 PAK-interacting exchange factor beta isoform c [Hom... 35 0.14
gi|22027528 PAK-interacting exchange factor beta isoform b [Homo... 35 0.14
gi|166064038 PAK-interacting exchange factor beta isoform a [Hom... 35 0.19
gi|4505573 PAK-interacting exchange factor beta isoform a [Homo ... 35 0.19
>gi|30410728 fucosyltransferase 8 isoform a [Homo sapiens]
Length = 575
Score = 1194 bits (3088), Expect = 0.0
Identities = 575/575 (100%), Positives = 575/575 (100%)
Query: 1 MRPWTGSWRWIMLILFAWGTLLFYIGGHLVRDNDHPDHSSRELSKILAKLERLKQQNEDL 60
MRPWTGSWRWIMLILFAWGTLLFYIGGHLVRDNDHPDHSSRELSKILAKLERLKQQNEDL
Sbjct: 1 MRPWTGSWRWIMLILFAWGTLLFYIGGHLVRDNDHPDHSSRELSKILAKLERLKQQNEDL 60
Query: 61 RRMAESLRIPEGPIDQGPAIGRVRVLEEQLVKAKEQIENYKKQTRNGLGKDHEILRRRIE 120
RRMAESLRIPEGPIDQGPAIGRVRVLEEQLVKAKEQIENYKKQTRNGLGKDHEILRRRIE
Sbjct: 61 RRMAESLRIPEGPIDQGPAIGRVRVLEEQLVKAKEQIENYKKQTRNGLGKDHEILRRRIE 120
Query: 121 NGAKELWFFLQSELKKLKNLEGNELQRHADEFLLDLGHHERSIMTDLYYLSQTDGAGDWR 180
NGAKELWFFLQSELKKLKNLEGNELQRHADEFLLDLGHHERSIMTDLYYLSQTDGAGDWR
Sbjct: 121 NGAKELWFFLQSELKKLKNLEGNELQRHADEFLLDLGHHERSIMTDLYYLSQTDGAGDWR 180
Query: 181 EKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRT 240
EKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRT
Sbjct: 181 EKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRT 240
Query: 241 LILESQNWRYATGGWETVFRPVSETCTDRSGISTGHWSGEVKDKNVQVVELPIVDSLHPR 300
LILESQNWRYATGGWETVFRPVSETCTDRSGISTGHWSGEVKDKNVQVVELPIVDSLHPR
Sbjct: 241 LILESQNWRYATGGWETVFRPVSETCTDRSGISTGHWSGEVKDKNVQVVELPIVDSLHPR 300
Query: 301 PPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATKKLGFKHPVI 360
PPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATKKLGFKHPVI
Sbjct: 301 PPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATKKLGFKHPVI 360
Query: 361 GVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLKEAKTK 420
GVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLKEAKTK
Sbjct: 361 GVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLKEAKTK 420
Query: 421 YPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQ 480
YPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQ
Sbjct: 421 YPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQ 480
Query: 481 TLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYS 540
TLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYS
Sbjct: 481 TLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYS 540
Query: 541 KGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK 575
KGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK
Sbjct: 541 KGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK 575
>gi|30410726 fucosyltransferase 8 isoform a [Homo sapiens]
Length = 575
Score = 1194 bits (3088), Expect = 0.0
Identities = 575/575 (100%), Positives = 575/575 (100%)
Query: 1 MRPWTGSWRWIMLILFAWGTLLFYIGGHLVRDNDHPDHSSRELSKILAKLERLKQQNEDL 60
MRPWTGSWRWIMLILFAWGTLLFYIGGHLVRDNDHPDHSSRELSKILAKLERLKQQNEDL
Sbjct: 1 MRPWTGSWRWIMLILFAWGTLLFYIGGHLVRDNDHPDHSSRELSKILAKLERLKQQNEDL 60
Query: 61 RRMAESLRIPEGPIDQGPAIGRVRVLEEQLVKAKEQIENYKKQTRNGLGKDHEILRRRIE 120
RRMAESLRIPEGPIDQGPAIGRVRVLEEQLVKAKEQIENYKKQTRNGLGKDHEILRRRIE
Sbjct: 61 RRMAESLRIPEGPIDQGPAIGRVRVLEEQLVKAKEQIENYKKQTRNGLGKDHEILRRRIE 120
Query: 121 NGAKELWFFLQSELKKLKNLEGNELQRHADEFLLDLGHHERSIMTDLYYLSQTDGAGDWR 180
NGAKELWFFLQSELKKLKNLEGNELQRHADEFLLDLGHHERSIMTDLYYLSQTDGAGDWR
Sbjct: 121 NGAKELWFFLQSELKKLKNLEGNELQRHADEFLLDLGHHERSIMTDLYYLSQTDGAGDWR 180
Query: 181 EKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRT 240
EKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRT
Sbjct: 181 EKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRT 240
Query: 241 LILESQNWRYATGGWETVFRPVSETCTDRSGISTGHWSGEVKDKNVQVVELPIVDSLHPR 300
LILESQNWRYATGGWETVFRPVSETCTDRSGISTGHWSGEVKDKNVQVVELPIVDSLHPR
Sbjct: 241 LILESQNWRYATGGWETVFRPVSETCTDRSGISTGHWSGEVKDKNVQVVELPIVDSLHPR 300
Query: 301 PPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATKKLGFKHPVI 360
PPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATKKLGFKHPVI
Sbjct: 301 PPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATKKLGFKHPVI 360
Query: 361 GVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLKEAKTK 420
GVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLKEAKTK
Sbjct: 361 GVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLKEAKTK 420
Query: 421 YPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQ 480
YPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQ
Sbjct: 421 YPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQ 480
Query: 481 TLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYS 540
TLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYS
Sbjct: 481 TLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYS 540
Query: 541 KGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK 575
KGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK
Sbjct: 541 KGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK 575
>gi|30410724 fucosyltransferase 8 isoform a [Homo sapiens]
Length = 575
Score = 1194 bits (3088), Expect = 0.0
Identities = 575/575 (100%), Positives = 575/575 (100%)
Query: 1 MRPWTGSWRWIMLILFAWGTLLFYIGGHLVRDNDHPDHSSRELSKILAKLERLKQQNEDL 60
MRPWTGSWRWIMLILFAWGTLLFYIGGHLVRDNDHPDHSSRELSKILAKLERLKQQNEDL
Sbjct: 1 MRPWTGSWRWIMLILFAWGTLLFYIGGHLVRDNDHPDHSSRELSKILAKLERLKQQNEDL 60
Query: 61 RRMAESLRIPEGPIDQGPAIGRVRVLEEQLVKAKEQIENYKKQTRNGLGKDHEILRRRIE 120
RRMAESLRIPEGPIDQGPAIGRVRVLEEQLVKAKEQIENYKKQTRNGLGKDHEILRRRIE
Sbjct: 61 RRMAESLRIPEGPIDQGPAIGRVRVLEEQLVKAKEQIENYKKQTRNGLGKDHEILRRRIE 120
Query: 121 NGAKELWFFLQSELKKLKNLEGNELQRHADEFLLDLGHHERSIMTDLYYLSQTDGAGDWR 180
NGAKELWFFLQSELKKLKNLEGNELQRHADEFLLDLGHHERSIMTDLYYLSQTDGAGDWR
Sbjct: 121 NGAKELWFFLQSELKKLKNLEGNELQRHADEFLLDLGHHERSIMTDLYYLSQTDGAGDWR 180
Query: 181 EKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRT 240
EKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRT
Sbjct: 181 EKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRT 240
Query: 241 LILESQNWRYATGGWETVFRPVSETCTDRSGISTGHWSGEVKDKNVQVVELPIVDSLHPR 300
LILESQNWRYATGGWETVFRPVSETCTDRSGISTGHWSGEVKDKNVQVVELPIVDSLHPR
Sbjct: 241 LILESQNWRYATGGWETVFRPVSETCTDRSGISTGHWSGEVKDKNVQVVELPIVDSLHPR 300
Query: 301 PPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATKKLGFKHPVI 360
PPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATKKLGFKHPVI
Sbjct: 301 PPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYLIRPQPWLEKEIEEATKKLGFKHPVI 360
Query: 361 GVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLKEAKTK 420
GVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLKEAKTK
Sbjct: 361 GVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVDKKRVYLATDDPSLLKEAKTK 420
Query: 421 YPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQ 480
YPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQ
Sbjct: 421 YPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQ 480
Query: 481 TLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYS 540
TLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYS
Sbjct: 481 TLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYS 540
Query: 541 KGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK 575
KGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK
Sbjct: 541 KGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK 575
>gi|30410722 fucosyltransferase 8 isoform b [Homo sapiens]
Length = 446
Score = 867 bits (2239), Expect = 0.0
Identities = 414/415 (99%), Positives = 415/415 (100%)
Query: 161 RSIMTDLYYLSQTDGAGDWREKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGY 220
+SIMTDLYYLSQTDGAGDWREKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGY
Sbjct: 32 KSIMTDLYYLSQTDGAGDWREKEAKDLTELVQRRITYLQNPKDCSKAKKLVCNINKGCGY 91
Query: 221 GCQLHHVVYCFMIAYGTQRTLILESQNWRYATGGWETVFRPVSETCTDRSGISTGHWSGE 280
GCQLHHVVYCFMIAYGTQRTLILESQNWRYATGGWETVFRPVSETCTDRSGISTGHWSGE
Sbjct: 92 GCQLHHVVYCFMIAYGTQRTLILESQNWRYATGGWETVFRPVSETCTDRSGISTGHWSGE 151
Query: 281 VKDKNVQVVELPIVDSLHPRPPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYLIRPQP 340
VKDKNVQVVELPIVDSLHPRPPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYLIRPQP
Sbjct: 152 VKDKNVQVVELPIVDSLHPRPPYLPLAVPEDLADRLVRVHGDPAVWWVSQFVKYLIRPQP 211
Query: 341 WLEKEIEEATKKLGFKHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVD 400
WLEKEIEEATKKLGFKHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVD
Sbjct: 212 WLEKEIEEATKKLGFKHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQVD 271
Query: 401 KKRVYLATDDPSLLKEAKTKYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQA 460
KKRVYLATDDPSLLKEAKTKYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQA
Sbjct: 272 KKRVYLATDDPSLLKEAKTKYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQA 331
Query: 461 DFLVCTFSSQVCRVAYEIMQTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADE 520
DFLVCTFSSQVCRVAYEIMQTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADE
Sbjct: 332 DFLVCTFSSQVCRVAYEIMQTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADE 391
Query: 521 IPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK 575
IPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK
Sbjct: 392 IPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK 446
>gi|30410730 fucosyltransferase 8 isoform c [Homo sapiens]
Length = 169
Score = 328 bits (841), Expect = 8e-90
Identities = 155/156 (99%), Positives = 156/156 (100%)
Query: 420 KYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIM 479
+YPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIM
Sbjct: 14 RYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIM 73
Query: 480 QTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGY 539
QTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGY
Sbjct: 74 QTLHPDASANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGY 133
Query: 540 SKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK 575
SKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK
Sbjct: 134 SKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEAEK 169
>gi|166235148 osteoclast stimulating factor 1 [Homo sapiens]
Length = 214
Score = 49.7 bits (117), Expect = 7e-06
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 10/71 (14%)
Query: 509 AIYAHQPRTADEIPMEPGDIIGVAG----NHWDGYSKGVNRKLGRTGLYPSYKVREKIET 564
A+Y +PRT DE+ E GDII + N W G SK GRTGL PS V E+ E+
Sbjct: 19 ALYTFEPRTPDELYFEEGDIIYITDMSDTNWWKGTSK------GRTGLIPSNYVAEQAES 72
Query: 565 VKYPTYPEAEK 575
+ P + A++
Sbjct: 73 IDNPLHEAAKR 83
>gi|222446607 SH3 domain containing ring finger 2 [Homo sapiens]
Length = 729
Score = 41.2 bits (95), Expect = 0.003
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 479 MQTLHPDASANFHSLDDIYYFGGQ---NAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNH 535
+ T HP + HS + G Q +A+ +A++++ DE+ ++ G+ + V G
Sbjct: 354 VSTYHPAPVSPGHSTAVVSLPGSQQHLSANMFVALHSYSAHGPDELDLQKGEGVRVLGKC 413
Query: 536 WDGYSKGVNRKLGRTGLYPS 555
DG+ +GV+ GR G++P+
Sbjct: 414 QDGWLRGVSLVTGRVGIFPN 433
>gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo
sapiens]
Length = 693
Score = 39.3 bits (90), Expect = 0.010
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 41 RELSKILAKL-ERLKQQNEDLRRMAESLRIPEGPIDQGPAIGRVRVLEEQLVKAKEQIEN 99
RE K L + ERL++Q + LR+ E LR E + + R+ EE+L K +E+++
Sbjct: 368 REQQKTLQEQGERLRKQEQRLRKQEERLRKEEERLQKQEK--RLWDQEERLWKKEERLQ- 424
Query: 100 YKKQTRNGLGKDHEILRRRIENGAKELWFFLQSELKKLKNLEG--NELQRHADEFLLDLG 157
K++ R L ++H++ ++ E + L +E K LE ELQ DE L+
Sbjct: 425 -KQEERLALSQNHKLDKQLAEPQCS--FEDLNNEKKSALQLEQQVKELQEKLDEEHLEAA 481
Query: 158 HHERSIMTDLYYLSQTDGAGD 178
H+ + L G GD
Sbjct: 482 SHQNQQLETQLSLVALPGEGD 502
>gi|150010572 SH3 domain containing ring finger 3 [Homo sapiens]
Length = 882
Score = 38.9 bits (89), Expect = 0.013
Identities = 15/47 (31%), Positives = 31/47 (65%)
Query: 508 IAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYP 554
+A+YA++P+ +DE+ + G++ V DG+ KG + + G +G++P
Sbjct: 470 LALYAYKPQKSDELELHKGEMYRVLEKCQDGWFKGASLRTGVSGVFP 516
Score = 38.9 bits (89), Expect = 0.013
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 510 IYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYP 554
+ ++ P++ EI ++ GDI+ V DG+ KG ++ GRTGL+P
Sbjct: 831 VVSYPPQSEAEIELKEGDIVFVHKKREDGWYKGTLQRNGRTGLFP 875
>gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo
sapiens]
Length = 1747
Score = 38.1 bits (87), Expect = 0.022
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Query: 508 IAIYAHQPRTADEIPMEPGDIIGV----AGNHWDGYSKGVNRKLGRTGLYPSYKVREKIE 563
IA+ AH P+ EIP+ G+ + V G W+G K GRTG +P+ V E+++
Sbjct: 493 IAVKAHSPQGEGEIPLHRGEAVKVLSIGEGGFWEGTVK------GRTGWFPADCV-EEVQ 545
Query: 564 TVKYPTYPEAEK 575
++ T PE +
Sbjct: 546 MRQHDTRPETRE 557
>gi|67514036 SH3-domain kinase binding protein 1 isoform b [Homo
sapiens]
Length = 628
Score = 38.1 bits (87), Expect = 0.022
Identities = 18/50 (36%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 511 YAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVRE 560
+++ P+ DE+ ++ GDII V G +G+ +GV G+TG++PS ++E
Sbjct: 70 FSYLPQNDDELELKVGDIIEVVGEVEEGWWEGVLN--GKTGMFPSNFIKE 117
>gi|13994242 SH3-domain kinase binding protein 1 isoform a [Homo
sapiens]
Length = 665
Score = 38.1 bits (87), Expect = 0.022
Identities = 18/50 (36%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 511 YAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVRE 560
+++ P+ DE+ ++ GDII V G +G+ +GV G+TG++PS ++E
Sbjct: 107 FSYLPQNDDELELKVGDIIEVVGEVEEGWWEGVLN--GKTGMFPSNFIKE 154
>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
sapiens]
Length = 1843
Score = 37.0 bits (84), Expect = 0.049
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 26/195 (13%)
Query: 29 LVRDNDHPDHSSRELSKILAKLE--------------RLKQQNEDLRRMAESLRIPEGPI 74
L ++N + +R+L K L + +L ++N +LRR ESL+ +
Sbjct: 661 LEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKM 720
Query: 75 DQGPAIGR-VRVLEEQLVKAKEQIE-NYKKQTR-----NGLGKDHEILRRRIENGAKELW 127
Q + + +EQL K E ++ ++KK R GL +++ L++ +EN K++
Sbjct: 721 AQLQLENKELESEKEQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQKTLENSNKKIQ 780
Query: 128 FFLQSELKKLKNLEGNELQRHADEFLLD---LGHHERSIMTDLYYLSQTDGAGDWREKEA 184
L+SEL+ L+ +E LQ++ +E + L E+ + SQ + EKE
Sbjct: 781 -QLESELQDLE-MENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKEN 838
Query: 185 KDLTELVQRRITYLQ 199
K L + + + T L+
Sbjct: 839 KRLRQQAEIKDTTLE 853
>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
sapiens]
Length = 1870
Score = 37.0 bits (84), Expect = 0.049
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 26/195 (13%)
Query: 29 LVRDNDHPDHSSRELSKILAKLE--------------RLKQQNEDLRRMAESLRIPEGPI 74
L ++N + +R+L K L + +L ++N +LRR ESL+ +
Sbjct: 661 LEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKM 720
Query: 75 DQGPAIGR-VRVLEEQLVKAKEQIE-NYKKQTR-----NGLGKDHEILRRRIENGAKELW 127
Q + + +EQL K E ++ ++KK R GL +++ L++ +EN K++
Sbjct: 721 AQLQLENKELESEKEQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQKTLENSNKKIQ 780
Query: 128 FFLQSELKKLKNLEGNELQRHADEFLLD---LGHHERSIMTDLYYLSQTDGAGDWREKEA 184
L+SEL+ L+ +E LQ++ +E + L E+ + SQ + EKE
Sbjct: 781 -QLESELQDLE-MENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKEN 838
Query: 185 KDLTELVQRRITYLQ 199
K L + + + T L+
Sbjct: 839 KRLRQQAEIKDTTLE 853
>gi|51988887 SH3 domain containing ring finger 1 [Homo sapiens]
Length = 888
Score = 37.0 bits (84), Expect = 0.049
Identities = 15/45 (33%), Positives = 29/45 (64%)
Query: 510 IYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYP 554
+ ++ P++ E+ ++ GDI+ V DG+ KG ++ G+TGL+P
Sbjct: 837 VVSYPPQSEAELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFP 881
Score = 35.4 bits (80), Expect = 0.14
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 508 IAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYP 554
+AIY + PR DE+ + G++ V DG+ KG + + G++P
Sbjct: 451 VAIYPYTPRKEDELELRKGEMFLVFERCQDGWFKGTSMHTSKIGVFP 497
>gi|78000171 sorbin and SH3 domain containing 1 isoform 7 [Homo
sapiens]
Length = 740
Score = 36.2 bits (82), Expect = 0.084
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 502 QNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVR 559
Q+ + A+Y++ P+ DE+ + GDI+ V DG+ G +R+ + G +P V+
Sbjct: 679 QDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTKQFGTFPGNYVK 736
>gi|78000169 sorbin and SH3 domain containing 1 isoform 6 [Homo
sapiens]
Length = 781
Score = 36.2 bits (82), Expect = 0.084
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 502 QNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVR 559
Q+ + A+Y++ P+ DE+ + GDI+ V DG+ G +R+ + G +P V+
Sbjct: 720 QDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTKQFGTFPGNYVK 777
>gi|78000167 sorbin and SH3 domain containing 1 isoform 5 [Homo
sapiens]
Length = 905
Score = 36.2 bits (82), Expect = 0.084
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 502 QNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVR 559
Q+ + A+Y++ P+ DE+ + GDI+ V DG+ G +R+ + G +P V+
Sbjct: 844 QDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTKQFGTFPGNYVK 901
>gi|78000165 sorbin and SH3 domain containing 1 isoform 4 [Homo
sapiens]
Length = 1151
Score = 36.2 bits (82), Expect = 0.084
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 502 QNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVR 559
Q+ + A+Y++ P+ DE+ + GDI+ V DG+ G +R+ + G +P V+
Sbjct: 1090 QDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTKQFGTFPGNYVK 1147
>gi|78000163 sorbin and SH3 domain containing 1 isoform 3 [Homo
sapiens]
Length = 1292
Score = 36.2 bits (82), Expect = 0.084
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 502 QNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVR 559
Q+ + A+Y++ P+ DE+ + GDI+ V DG+ G +R+ + G +P V+
Sbjct: 1231 QDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTKQFGTFPGNYVK 1288
>gi|7661700 sorbin and SH3 domain containing 1 isoform 2 [Homo
sapiens]
Length = 816
Score = 36.2 bits (82), Expect = 0.084
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 502 QNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVR 559
Q+ + A+Y++ P+ DE+ + GDI+ V DG+ G +R+ + G +P V+
Sbjct: 755 QDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTKQFGTFPGNYVK 812
>gi|78000160 sorbin and SH3 domain containing 1 isoform 1 [Homo
sapiens]
Length = 684
Score = 36.2 bits (82), Expect = 0.084
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 502 QNAHNQIAIYAHQPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVR 559
Q+ + A+Y++ P+ DE+ + GDI+ V DG+ G +R+ + G +P V+
Sbjct: 623 QDLFSYQALYSYIPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTKQFGTFPGNYVK 680
>gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo
sapiens]
Length = 693
Score = 36.2 bits (82), Expect = 0.084
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 41 RELSKILAKL-ERLKQQNEDLRRMAESLRIPEGPIDQGPAIGRVRVLEEQLVKAKEQIEN 99
RE K L + ERL++Q + LR+ E LR E + + R+ EE+L K +E+++
Sbjct: 368 REQQKTLQEQGERLRKQEQRLRKQEERLRKEEERLQKQEK--RLWDQEERLWKKEERLQ- 424
Query: 100 YKKQTRNGLGKDHEILRRRIENGAKELWFFLQSELKKLKNLEG--NELQRHADEFLLDLG 157
K++ R L ++H++ ++ E + L +E K LE ELQ DE L+
Sbjct: 425 -KQEERLALSQNHKLDKQLAEPQCS--FEDLNNEKKSALQLEQQVKELQEKLDEEHLEAA 481
Query: 158 HHERSIMTDLYYLSQTDGAGD 178
+ + L G GD
Sbjct: 482 SQQNQQLETQLSLVALPGEGD 502
>gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo
sapiens]
Length = 693
Score = 35.4 bits (80), Expect = 0.14
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 9/141 (6%)
Query: 41 RELSKILAKL-ERLKQQNEDLRRMAESLRIPEGPIDQGPAIGRVRVLEEQLVKAKEQIEN 99
RE K L + ERL++Q + LR+ E LR E + + R+ EE+L K +E+++
Sbjct: 368 REQQKTLQEQGERLRKQEQRLRKQEERLRKEEERLQKQEK--RLWDQEERLWKKEERLQ- 424
Query: 100 YKKQTRNGLGKDHEILRRRIENGAKELWFFLQSELKKLKNLEG--NELQRHADEFLLDLG 157
K++ R L ++H++ ++ E + L +E K LE ELQ DE L+
Sbjct: 425 -KQEERLALSQNHKLDKQLAEPQCS--FEDLNNEKKSALQLEQQVKELQEKLDEEHLEAA 481
Query: 158 HHERSIMTDLYYLSQTDGAGD 178
+ L G GD
Sbjct: 482 SQRNQQLETQLSLVALPGEGD 502
>gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C
isoform 1 [Homo sapiens]
Length = 693
Score = 35.4 bits (80), Expect = 0.14
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 9/141 (6%)
Query: 41 RELSKILAKL-ERLKQQNEDLRRMAESLRIPEGPIDQGPAIGRVRVLEEQLVKAKEQIEN 99
RE K L + ERL++Q + LR+ E LR E + + R+ EE+L K +E+++
Sbjct: 368 REQQKTLQEQGERLRKQEQRLRKQEERLRKEEERLQKQEK--RLWDQEERLWKKEERLQ- 424
Query: 100 YKKQTRNGLGKDHEILRRRIENGAKELWFFLQSELKKLKNLEG--NELQRHADEFLLDLG 157
K++ R L ++H++ ++ E + L +E K LE ELQ DE L+
Sbjct: 425 -KQEERLALSQNHKLDKQLAEPQCS--FEDLNNEKKSALQLEQQVKELQEKLDEEHLEAA 481
Query: 158 HHERSIMTDLYYLSQTDGAGD 178
+ L G GD
Sbjct: 482 SQRNQQLETQLSLVALPGEGD 502
>gi|166064036 PAK-interacting exchange factor beta isoform d [Homo
sapiens]
Length = 753
Score = 35.4 bits (80), Expect = 0.14
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 480 QTLHPDAS----ANFHSLDDIYYFGGQNAHNQIAIYAH---QPRTADEIPMEPGDIIGVA 532
Q+LH S + SLD N++NQ+ + A Q DE+ GD+I V
Sbjct: 110 QSLHTRTSKLFQGQYRSLDMT-----DNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVT 164
Query: 533 GNHWDGYSKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEA 573
G+ +G GRTG +PS VRE ++ + P P++
Sbjct: 165 RVEEGGWWEGTLN--GRTGWFPSNYVRE-VKASEKPVSPKS 202
>gi|166064034 PAK-interacting exchange factor beta isoform c [Homo
sapiens]
Length = 803
Score = 35.4 bits (80), Expect = 0.14
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 480 QTLHPDAS----ANFHSLDDIYYFGGQNAHNQIAIYAH---QPRTADEIPMEPGDIIGVA 532
Q+LH S + SLD N++NQ+ + A Q DE+ GD+I V
Sbjct: 160 QSLHTRTSKLFQGQYRSLDMT-----DNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVT 214
Query: 533 GNHWDGYSKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEA 573
G+ +G GRTG +PS VRE ++ + P P++
Sbjct: 215 RVEEGGWWEGTLN--GRTGWFPSNYVRE-VKASEKPVSPKS 252
>gi|22027528 PAK-interacting exchange factor beta isoform b [Homo
sapiens]
Length = 782
Score = 35.4 bits (80), Expect = 0.14
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 15/101 (14%)
Query: 480 QTLHPDAS----ANFHSLDDIYYFGGQNAHNQIAIYAH---QPRTADEIPMEPGDIIGVA 532
Q+LH S + SLD N++NQ+ + A Q DE+ GD+I V
Sbjct: 139 QSLHTRTSKLFQGQYRSLDMT-----DNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVT 193
Query: 533 GNHWDGYSKGVNRKLGRTGLYPSYKVREKIETVKYPTYPEA 573
G+ +G GRTG +PS VRE ++ + P P++
Sbjct: 194 RVEEGGWWEGTLN--GRTGWFPSNYVRE-VKASEKPVSPKS 231
>gi|166064038 PAK-interacting exchange factor beta isoform a [Homo
sapiens]
Length = 646
Score = 35.0 bits (79), Expect = 0.19
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 503 NAHNQIAIYAH---QPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVR 559
N++NQ+ + A Q DE+ GD+I V G+ +G GRTG +PS VR
Sbjct: 4 NSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLN--GRTGWFPSNYVR 61
Query: 560 EKIETVKYPTYPEA 573
E ++ + P P++
Sbjct: 62 E-VKASEKPVSPKS 74
>gi|4505573 PAK-interacting exchange factor beta isoform a [Homo
sapiens]
Length = 646
Score = 35.0 bits (79), Expect = 0.19
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 503 NAHNQIAIYAH---QPRTADEIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVR 559
N++NQ+ + A Q DE+ GD+I V G+ +G GRTG +PS VR
Sbjct: 4 NSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLN--GRTGWFPSNYVR 61
Query: 560 EKIETVKYPTYPEA 573
E ++ + P P++
Sbjct: 62 E-VKASEKPVSPKS 74
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,770,367
Number of Sequences: 37866
Number of extensions: 1036296
Number of successful extensions: 3289
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 3147
Number of HSP's gapped (non-prelim): 257
length of query: 575
length of database: 18,247,518
effective HSP length: 108
effective length of query: 467
effective length of database: 14,157,990
effective search space: 6611781330
effective search space used: 6611781330
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.