Guide to the Human Genome
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Name: SH3RF2 Sequence: fasta or formatted (729aa) NCBI GI: 222446607
Description:

SH3 domain containing ring finger 2

Referenced in:

Ring Finger Proteins
Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         36           2
 C cysteine            1.9         14           1
 D aspartate           3.4         25           2
 E glutamate           4.0         29           1
 F phenylalanine       3.3         24           1
 G glycine             7.8         57           2
 H histidine           2.2         16           1
 I isoleucine          4.1         30           2
 K lysine              5.2         38           1
 L leucine             9.3         68           3
 M methionine          1.6         12           1
 N asparagine          3.8         28           2
 P proline             9.1         66           3
 Q glutamine           4.9         36           2
 R arginine            7.4         54           2
 S serine             11.7         85           4
 T threonine           6.2         45           2
 V valine              7.1         52           3
 W tryptophan          0.5          4           1
 Y tyrosine            1.4         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH3 domain containing ring finger 2 
SH3RF1                0.240   SH3 domain containing ring finger 1 
SH3RF3                0.234   SH3 domain containing ring finger 3 
SORBS1                0.063   sorbin and SH3 domain containing 1 isoform 4 
SORBS3                0.060   sorbin and SH3 domain containing 3 isoform 1 
SORBS3                0.060   sorbin and SH3 domain containing 3 isoform 2 
SORBS1                0.056   sorbin and SH3 domain containing 1 isoform 5 
ITSN1                 0.046   intersectin 1 isoform ITSN-s 
ITSN1                 0.046   intersectin 1 isoform ITSN-l 
SORBS2                0.040   sorbin and SH3 domain containing 2 isoform 8 
SORBS2                0.040   sorbin and SH3 domain containing 2 isoform 7 
SORBS2                0.040   sorbin and SH3 domain containing 2 isoform 6 
SORBS2                0.040   sorbin and SH3 domain containing 2 isoform 5 
SORBS2                0.040   sorbin and SH3 domain containing 2 isoform 4 
SORBS2                0.040   sorbin and SH3 domain containing 2 isoform 3 
SORBS2                0.040   sorbin and SH3 domain containing 2 isoform 2 
SORBS2                0.040   sorbin and SH3 domain containing 2 isoform 1 
SORBS1                0.038   sorbin and SH3 domain containing 1 isoform 3 
SH3D19                0.038   SH3 domain containing 19 isoform c 
SH3D19                0.038   SH3 domain containing 19 isoform b 
SH3D19                0.038   SH3 domain containing 19 isoform a 
SORBS1                0.038   sorbin and SH3 domain containing 1 isoform 2 
SORBS1                0.038   sorbin and SH3 domain containing 1 isoform 1 
ITSN2                 0.038   intersectin 2 isoform 3 
ITSN2                 0.038   intersectin 2 isoform 1 
ITSN2                 0.038   intersectin 2 isoform 2 
SORBS1                0.038   sorbin and SH3 domain containing 1 isoform 7 
SORBS1                0.038   sorbin and SH3 domain containing 1 isoform 6 
SH3GL1                0.031   SH3-domain GRB2-like 1 
SH3GL3                0.029   SH3-domain GRB2-like 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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