Guide to the Human Genome
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Name: SORBS1 Sequence: fasta or formatted (740aa) NCBI GI: 78000171
Description:

sorbin and SH3 domain containing 1 isoform 7

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [816aa] sorbin and SH3 domain containing 1 isoform 2
alt prot [684aa] sorbin and SH3 domain containing 1 isoform 1
alt prot [1292aa] sorbin and SH3 domain containing 1 isoform 3
alt prot [1151aa] sorbin and SH3 domain containing 1 isoform 4
alt prot [905aa] sorbin and SH3 domain containing 1 isoform 5
alt prot [781aa] sorbin and SH3 domain containing 1 isoform 6
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         39           2
 C cysteine            0.4          3           1
 D aspartate           7.4         55           3
 E glutamate           6.9         51           2
 F phenylalanine       2.7         20           1
 G glycine             5.4         40           2
 H histidine           1.6         12           2
 I isoleucine          4.5         33           1
 K lysine              7.2         53           2
 L leucine             6.8         50           2
 M methionine          1.5         11           1
 N asparagine          3.1         23           1
 P proline             7.6         56           2
 Q glutamine           5.1         38           2
 R arginine            7.2         53           3
 S serine             12.7         94           3
 T threonine           5.4         40           2
 V valine              4.9         36           2
 W tryptophan          0.8          6           1
 Y tyrosine            3.6         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sorbin and SH3 domain containing 1 isoform 7 
SORBS1                0.983   sorbin and SH3 domain containing 1 isoform 6 
SORBS1                0.935   sorbin and SH3 domain containing 1 isoform 5 
SORBS1                0.899   sorbin and SH3 domain containing 1 isoform 1 
SORBS1                0.754   sorbin and SH3 domain containing 1 isoform 2 
SORBS1                0.685   sorbin and SH3 domain containing 1 isoform 3 
SORBS1                0.517   sorbin and SH3 domain containing 1 isoform 4 
SORBS2                0.264   sorbin and SH3 domain containing 2 isoform 4 
SORBS2                0.263   sorbin and SH3 domain containing 2 isoform 5 
SORBS2                0.263   sorbin and SH3 domain containing 2 isoform 3 
SORBS2                0.262   sorbin and SH3 domain containing 2 isoform 1 
SORBS2                0.246   sorbin and SH3 domain containing 2 isoform 8 
SORBS2                0.245   sorbin and SH3 domain containing 2 isoform 6 
SORBS2                0.183   sorbin and SH3 domain containing 2 isoform 7 
SORBS2                0.183   sorbin and SH3 domain containing 2 isoform 2 
SORBS3                0.174   sorbin and SH3 domain containing 3 isoform 1 
SORBS3                0.169   sorbin and SH3 domain containing 3 isoform 2 
SH3D19                0.056   SH3 domain containing 19 isoform c 
SH3D19                0.056   SH3 domain containing 19 isoform b 
SH3D19                0.056   SH3 domain containing 19 isoform a 
SH3KBP1               0.048   SH3-domain kinase binding protein 1 isoform a 
C1orf113              0.046   SH3 domain-containing protein C1orf113 isoform 1 [H...
SH3RF3                0.040   SH3 domain containing ring finger 3 
SH3RF1                0.039   SH3 domain containing ring finger 1 
GRB2                  0.038   growth factor receptor-bound protein 2 isoform 1 [Hom...
DNMBP                 0.038   dynamin binding protein 
SH3RF2                0.037   SH3 domain containing ring finger 2 
CD2AP                 0.037   CD2-associated protein 
ITSN1                 0.037   intersectin 1 isoform ITSN-s 
ITSN1                 0.037   intersectin 1 isoform ITSN-l 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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