Guide to the Human Genome
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Name: SH3KBP1 Sequence: fasta or formatted (665aa) NCBI GI: 13994242
Description:

SH3-domain kinase binding protein 1 isoform a

Not currently referenced in the text

Other entries for this name:
alt prot {628aa} SH3-domain kinase binding protein 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         32           2
 C cysteine            0.5          3           1
 D aspartate           6.5         43           2
 E glutamate           9.6         64           2
 F phenylalanine       2.4         16           1
 G glycine             7.5         50           4
 H histidine           1.2          8           1
 I isoleucine          5.6         37           2
 K lysine              9.3         62           2
 L leucine             7.7         51           2
 M methionine          1.4          9           1
 N asparagine          3.3         22           1
 P proline             9.0         60           4
 Q glutamine           3.0         20           2
 R arginine            6.2         41           5
 S serine             10.1         67           3
 T threonine           5.7         38           2
 V valine              4.8         32           2
 W tryptophan          0.9          6           2
 Y tyrosine            0.6          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH3-domain kinase binding protein 1 isoform a 
SH3KBP1               0.914   SH3-domain kinase binding protein 1 isoform b 
CD2AP                 0.284   CD2-associated protein 
ITSN1                 0.068   intersectin 1 isoform ITSN-s 
ITSN1                 0.068   intersectin 1 isoform ITSN-l 
C1orf113              0.066   SH3 domain-containing protein C1orf113 isoform 1 [H...
SH3D19                0.061   SH3 domain containing 19 isoform c 
SH3D19                0.061   SH3 domain containing 19 isoform b 
SH3D19                0.061   SH3 domain containing 19 isoform a 
ITSN2                 0.055   intersectin 2 isoform 3 
ITSN2                 0.055   intersectin 2 isoform 1 
ITSN2                 0.055   intersectin 2 isoform 2 
SORBS1                0.054   sorbin and SH3 domain containing 1 isoform 7 
SORBS1                0.054   sorbin and SH3 domain containing 1 isoform 6 
SORBS1                0.054   sorbin and SH3 domain containing 1 isoform 2 
SORBS1                0.054   sorbin and SH3 domain containing 1 isoform 1 
SORBS1                0.052   sorbin and SH3 domain containing 1 isoform 5 
GRB2                  0.047   growth factor receptor-bound protein 2 isoform 2 [Ho...
SORBS3                0.046   sorbin and SH3 domain containing 3 isoform 1 
SORBS3                0.046   sorbin and SH3 domain containing 3 isoform 2 
SORBS1                0.046   sorbin and SH3 domain containing 1 isoform 4 
DNMBP                 0.046   dynamin binding protein 
SH3PXD2A              0.045   SH3 multiple domains 1 
SORBS2                0.045   sorbin and SH3 domain containing 2 isoform 8 
SORBS2                0.045   sorbin and SH3 domain containing 2 isoform 7 
SORBS2                0.045   sorbin and SH3 domain containing 2 isoform 6 
SORBS2                0.045   sorbin and SH3 domain containing 2 isoform 5 
SORBS2                0.045   sorbin and SH3 domain containing 2 isoform 4 
SORBS2                0.045   sorbin and SH3 domain containing 2 isoform 3 
C1orf113              0.045   SH3 domain-containing protein C1orf113 isoform 2 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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