Guide to the Human Genome
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Name: SH3KBP1 Sequence: fasta or formatted (628aa) NCBI GI: 67514036
Description:

SH3-domain kinase binding protein 1 isoform b

Not currently referenced in the text

Other entries for this name:
alt prot {665aa} SH3-domain kinase binding protein 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         35           2
 C cysteine            0.5          3           1
 D aspartate           6.2         39           2
 E glutamate           9.6         60           2
 F phenylalanine       2.1         13           1
 G glycine             7.0         44           4
 H histidine           1.1          7           1
 I isoleucine          5.1         32           2
 K lysine              9.9         62           2
 L leucine             8.0         50           2
 M methionine          1.4          9           1
 N asparagine          3.0         19           1
 P proline             9.6         60           4
 Q glutamine           2.7         17           2
 R arginine            5.9         37           5
 S serine             11.0         69           3
 T threonine           5.7         36           2
 V valine              4.6         29           2
 W tryptophan          0.6          4           2
 Y tyrosine            0.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH3-domain kinase binding protein 1 isoform b 
SH3KBP1               0.975   SH3-domain kinase binding protein 1 isoform a 
CD2AP                 0.241   CD2-associated protein 
ITSN1                 0.051   intersectin 1 isoform ITSN-s 
ITSN1                 0.051   intersectin 1 isoform ITSN-l 
C1orf113              0.048   SH3 domain-containing protein C1orf113 isoform 1 [H...
C1orf113              0.048   SH3 domain-containing protein C1orf113 isoform 2 [H...
DNMBP                 0.044   dynamin binding protein 
SORBS1                0.043   sorbin and SH3 domain containing 1 isoform 2 
SORBS1                0.043   sorbin and SH3 domain containing 1 isoform 1 
ITSN2                 0.041   intersectin 2 isoform 3 
ITSN2                 0.041   intersectin 2 isoform 1 
ITSN2                 0.041   intersectin 2 isoform 2 
SORBS1                0.036   sorbin and SH3 domain containing 1 isoform 5 
SORBS1                0.036   sorbin and SH3 domain containing 1 isoform 7 
SORBS1                0.036   sorbin and SH3 domain containing 1 isoform 6 
ARHGEF6               0.036   Rac/Cdc42 guanine nucleotide exchange factor 6 [Homo...
SORBS2                0.034   sorbin and SH3 domain containing 2 isoform 8 
SORBS2                0.034   sorbin and SH3 domain containing 2 isoform 7 
SORBS2                0.034   sorbin and SH3 domain containing 2 isoform 6 
SORBS2                0.034   sorbin and SH3 domain containing 2 isoform 5 
SORBS2                0.034   sorbin and SH3 domain containing 2 isoform 4 
SORBS2                0.034   sorbin and SH3 domain containing 2 isoform 3 
SORBS2                0.034   sorbin and SH3 domain containing 2 isoform 2 
SORBS2                0.034   sorbin and SH3 domain containing 2 isoform 1 
SORBS3                0.034   sorbin and SH3 domain containing 3 isoform 1 
SORBS3                0.034   sorbin and SH3 domain containing 3 isoform 2 
ARHGEF7               0.033   PAK-interacting exchange factor beta isoform d [Hom...
ARHGEF7               0.033   PAK-interacting exchange factor beta isoform c [Hom...
ARHGEF7               0.033   PAK-interacting exchange factor beta isoform b [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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