Guide to the Human Genome
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Name: SORBS1 Sequence: fasta or formatted (1151aa) NCBI GI: 78000165
Description:

sorbin and SH3 domain containing 1 isoform 4

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [816aa] sorbin and SH3 domain containing 1 isoform 2
alt prot [684aa] sorbin and SH3 domain containing 1 isoform 1
alt prot [1292aa] sorbin and SH3 domain containing 1 isoform 3
alt prot [905aa] sorbin and SH3 domain containing 1 isoform 5
alt prot [781aa] sorbin and SH3 domain containing 1 isoform 6
alt prot [740aa] sorbin and SH3 domain containing 1 isoform 7
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         72           2
 C cysteine            1.0         11           1
 D aspartate           6.4         74           3
 E glutamate           7.5         86           2
 F phenylalanine       2.6         30           2
 G glycine             5.7         66           2
 H histidine           1.5         17           2
 I isoleucine          4.1         47           2
 K lysine              6.5         75           2
 L leucine             7.2         83           2
 M methionine          1.1         13           1
 N asparagine          2.8         32           1
 P proline             9.6        111           4
 Q glutamine           4.6         53           2
 R arginine            6.7         77           3
 S serine             12.1        139           3
 T threonine           5.9         68           2
 V valine              4.7         54           2
 W tryptophan          0.9         10           1
 Y tyrosine            2.9         33           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sorbin and SH3 domain containing 1 isoform 4 
SORBS1                0.801   sorbin and SH3 domain containing 1 isoform 3 
SORBS1                0.396   sorbin and SH3 domain containing 1 isoform 5 
SORBS1                0.387   sorbin and SH3 domain containing 1 isoform 2 
SORBS1                0.330   sorbin and SH3 domain containing 1 isoform 6 
SORBS1                0.329   sorbin and SH3 domain containing 1 isoform 7 
SORBS1                0.265   sorbin and SH3 domain containing 1 isoform 1 
SORBS2                0.127   sorbin and SH3 domain containing 2 isoform 1 
SORBS3                0.107   sorbin and SH3 domain containing 3 isoform 1 
SORBS3                0.107   sorbin and SH3 domain containing 3 isoform 2 
SORBS2                0.102   sorbin and SH3 domain containing 2 isoform 5 
SORBS2                0.099   sorbin and SH3 domain containing 2 isoform 6 
SORBS2                0.099   sorbin and SH3 domain containing 2 isoform 4 
SORBS2                0.084   sorbin and SH3 domain containing 2 isoform 8 
SORBS2                0.082   sorbin and SH3 domain containing 2 isoform 3 
SORBS2                0.077   sorbin and SH3 domain containing 2 isoform 7 
SORBS2                0.077   sorbin and SH3 domain containing 2 isoform 2 
SH3RF3                0.050   SH3 domain containing ring finger 3 
SH3RF2                0.039   SH3 domain containing ring finger 2 
SH3RF1                0.031   SH3 domain containing ring finger 1 
SH3KBP1               0.026   SH3-domain kinase binding protein 1 isoform a 
SH3D19                0.026   SH3 domain containing 19 isoform c 
SH3D19                0.026   SH3 domain containing 19 isoform b 
SH3D19                0.026   SH3 domain containing 19 isoform a 
ITSN2                 0.023   intersectin 2 isoform 3 
ITSN2                 0.023   intersectin 2 isoform 1 
ITSN2                 0.023   intersectin 2 isoform 2 
DNMBP                 0.021   dynamin binding protein 
GRB2                  0.019   growth factor receptor-bound protein 2 isoform 1 [Hom...
C1orf113              0.017   SH3 domain-containing protein C1orf113 isoform 1 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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