Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 30410035
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30410035 late cornified envelope 5A [Homo sapiens]
(118 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30410035 late cornified envelope 5A [Homo sapiens] 283 3e-77
gi|30410043 late cornified envelope 2D [Homo sapiens] 186 4e-48
gi|7657685 late cornified envelope 2B [Homo sapiens] 181 1e-46
gi|30410047 late cornified envelope 2C [Homo sapiens] 181 1e-46
gi|30410045 late cornified envelope 2A [Homo sapiens] 180 2e-46
gi|239752912 PREDICTED: hypothetical protein [Homo sapiens] 179 5e-46
gi|30387650 late cornified envelope 1E [Homo sapiens] 179 5e-46
gi|30387646 late cornified envelope 1F [Homo sapiens] 178 9e-46
gi|30387652 late cornified envelope 1C [Homo sapiens] 177 1e-45
gi|30387654 late cornified envelope 1A [Homo sapiens] 174 1e-44
gi|30387656 late cornified envelope 1B [Homo sapiens] 173 3e-44
gi|30387648 late cornified envelope 1D [Homo sapiens] 164 1e-41
gi|30387642 late cornified envelope 4A [Homo sapiens] 162 5e-41
gi|30410033 late cornified envelope 3E [Homo sapiens] 120 3e-28
gi|30410037 late cornified envelope 3C [Homo sapiens] 116 4e-27
gi|14211869 late cornified envelope 3D [Homo sapiens] 115 6e-27
gi|30410041 late cornified envelope 3B [Homo sapiens] 114 1e-26
gi|30410039 late cornified envelope 3A [Homo sapiens] 113 4e-26
gi|83582817 small proline-rich protein 2E [Homo sapiens] 65 1e-11
gi|169212028 PREDICTED: keratin-associated protein 9-2-like 2-li... 64 3e-11
gi|62945419 small proline-rich protein 2F [Homo sapiens] 63 4e-11
gi|5174693 small proline-rich protein 2A [Homo sapiens] 63 6e-11
gi|62955831 small proline-rich protein 2B [Homo sapiens] 63 6e-11
gi|56699492 small proline-rich protein 2D [Homo sapiens] 63 6e-11
gi|9506923 cysteine-rich C-terminal 1 [Homo sapiens] 62 7e-11
gi|58082087 late cornified envelope-like proline-rich 1 [Homo sa... 62 7e-11
gi|239756792 PREDICTED: hypothetical protein [Homo sapiens] 60 3e-10
gi|239751312 PREDICTED: hypothetical protein [Homo sapiens] 60 3e-10
gi|239745809 PREDICTED: hypothetical protein [Homo sapiens] 60 3e-10
gi|169212012 PREDICTED: keratin-associated protein 9-2-like 1-li... 60 4e-10
>gi|30410035 late cornified envelope 5A [Homo sapiens]
Length = 118
Score = 283 bits (723), Expect = 3e-77
Identities = 118/118 (100%), Positives = 118/118 (100%)
Query: 1 MSCQQSQQQCQPPPKCTPKCPPKCTPKCPPKCPPKCPPQCSAPCPPPVSSCCGSSSGGCC 60
MSCQQSQQQCQPPPKCTPKCPPKCTPKCPPKCPPKCPPQCSAPCPPPVSSCCGSSSGGCC
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCTPKCPPKCPPKCPPQCSAPCPPPVSSCCGSSSGGCC 60
Query: 61 SSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCCHSSGGCC 118
SSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCCHSSGGCC
Sbjct: 61 SSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCCHSSGGCC 118
>gi|30410043 late cornified envelope 2D [Homo sapiens]
Length = 110
Score = 186 bits (471), Expect = 4e-48
Identities = 86/126 (68%), Positives = 87/126 (69%), Gaps = 24/126 (19%)
Query: 1 MSCQQSQQQCQPPPKCTPKCPPKCTPKCPPKCPPKCPPQCSAPCPPPVSSCCGSSSG--- 57
MSCQQ+QQQCQPPPKC PPKCTPKCPPKCPPKCPPQC APC P VSSCCG SSG
Sbjct: 1 MSCQQNQQQCQPPPKC----PPKCTPKCPPKCPPKCPPQCPAPCSPAVSSCCGPSSGSCC 56
Query: 58 -----GCCSSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCCH 112
GCCSS GGGCCLSHHRPR RRR QS CC S SG SGCCH
Sbjct: 57 GPSSGGCCSSGGGGCCLSHHRPRLFHRRRHQSPDCCES------------EPSGASGCCH 104
Query: 113 SSGGCC 118
SSGGCC
Sbjct: 105 SSGGCC 110
>gi|7657685 late cornified envelope 2B [Homo sapiens]
Length = 110
Score = 181 bits (458), Expect = 1e-46
Identities = 84/126 (66%), Positives = 86/126 (68%), Gaps = 24/126 (19%)
Query: 1 MSCQQSQQQCQPPPKCTPKCPPKCTPKCPPKCPPKCPPQCSAPCPPPVSSCCGS------ 54
MSCQQ+QQQCQPPPKC PPKCTPKCPPKCPPKC PQC APC P VSSCCG
Sbjct: 1 MSCQQNQQQCQPPPKC----PPKCTPKCPPKCPPKCLPQCPAPCSPAVSSCCGPISGGCC 56
Query: 55 --SSGGCCSSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCCH 112
SSGGCC+S GGCCLSHHRPR RRR QS CC S SGGSGCCH
Sbjct: 57 GPSSGGCCNSGAGGCCLSHHRPRLFHRRRHQSPDCCES------------EPSGGSGCCH 104
Query: 113 SSGGCC 118
SSGGCC
Sbjct: 105 SSGGCC 110
>gi|30410047 late cornified envelope 2C [Homo sapiens]
Length = 110
Score = 181 bits (458), Expect = 1e-46
Identities = 85/126 (67%), Positives = 86/126 (68%), Gaps = 24/126 (19%)
Query: 1 MSCQQSQQQCQPPPKCTPKCPPKCTPKCPPKCPPKCPPQCSAPCPPPVSSCCGSSSG--- 57
MSCQQ+QQQCQPPPKC PPKCTPKCPPKCPPKCPPQC APC P VSSCCG SSG
Sbjct: 1 MSCQQNQQQCQPPPKC----PPKCTPKCPPKCPPKCPPQCPAPCFPAVSSCCGPSSGSCC 56
Query: 58 -----GCCSSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCCH 112
GCCSS GGC LSHHRPR RRR QS CC S SGGSGCCH
Sbjct: 57 GPSSGGCCSSGAGGCSLSHHRPRLFHRRRHQSPDCCES------------EPSGGSGCCH 104
Query: 113 SSGGCC 118
SSGGCC
Sbjct: 105 SSGGCC 110
>gi|30410045 late cornified envelope 2A [Homo sapiens]
Length = 106
Score = 180 bits (457), Expect = 2e-46
Identities = 78/118 (66%), Positives = 81/118 (68%), Gaps = 12/118 (10%)
Query: 1 MSCQQSQQQCQPPPKCTPKCPPKCTPKCPPKCPPKCPPQCSAPCPPPVSSCCGSSSGGCC 60
MSCQQ+QQQCQPPPKC PKCPPKC PKC P+CP CPP S+ C P CCGSSSGGCC
Sbjct: 1 MSCQQNQQQCQPPPKCPPKCPPKCPPKCRPQCPAPCPPPVSSCCGPSSGGCCGSSSGGCC 60
Query: 61 SSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCCHSSGGCC 118
SS GGGCCLSHHRPR R R QS CC C SGGSGCCHSSG CC
Sbjct: 61 SSGGGGCCLSHHRPRLFHRHRHQSPDCCE------------CEPSGGSGCCHSSGDCC 106
>gi|239752912 PREDICTED: hypothetical protein [Homo sapiens]
Length = 118
Score = 179 bits (453), Expect = 5e-46
Identities = 88/126 (69%), Positives = 89/126 (70%), Gaps = 16/126 (12%)
Query: 1 MSCQQSQQQCQPPPKCTPKCPPKC-TPKCPPKCPPKCPPQ---CSAP----CPPPVSSCC 52
MSCQQSQQQCQPPPKCTPKCPPKC TPKCPPKCPPKCPP CS C C
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGSC 60
Query: 53 GSSSGGCCSSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCCH 112
GSSSGGCCSS GGGCCLSHHR +S R RPQSS CC Q SGGSSCC GGSG
Sbjct: 61 GSSSGGCCSSGGGGCCLSHHRHHRSHRHRPQSSDCC----SQPSGGSSCC--GGGSG--Q 112
Query: 113 SSGGCC 118
SGGCC
Sbjct: 113 HSGGCC 118
>gi|30387650 late cornified envelope 1E [Homo sapiens]
Length = 118
Score = 179 bits (453), Expect = 5e-46
Identities = 88/126 (69%), Positives = 89/126 (70%), Gaps = 16/126 (12%)
Query: 1 MSCQQSQQQCQPPPKCTPKCPPKC-TPKCPPKCPPKCPPQ---CSAP----CPPPVSSCC 52
MSCQQSQQQCQPPPKCTPKCPPKC TPKCPPKCPPKCPP CS C C
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGSC 60
Query: 53 GSSSGGCCSSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCCH 112
GSSSGGCCSS GGGCCLSHHR +S R RPQSS CC Q SGGSSCC GGSG
Sbjct: 61 GSSSGGCCSSGGGGCCLSHHRHHRSHRHRPQSSDCC----SQPSGGSSCC--GGGSG--Q 112
Query: 113 SSGGCC 118
SGGCC
Sbjct: 113 HSGGCC 118
>gi|30387646 late cornified envelope 1F [Homo sapiens]
Length = 118
Score = 178 bits (451), Expect = 9e-46
Identities = 88/127 (69%), Positives = 90/127 (70%), Gaps = 18/127 (14%)
Query: 1 MSCQQSQQQCQPPPKCTPKCPPKC-TPKCPPKCPPKCPPQCSAPCPPPVSSCCGSSS--- 56
MSCQQSQQQCQPPPKCTPKCPPKC TPKCPPKCPPKCPP S+ C CCGSSS
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKCPP-VSSCCSVSSGGCCGSSSGGC 59
Query: 57 -----GGCCSSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCC 111
GGCCSS GGGCCLSHHR R+S R RPQSS CC Q S GSSCC GGSG
Sbjct: 60 CSSGGGGCCSSGGGGCCLSHHRRRRSHRHRPQSSDCC----SQPSAGSSCC--GGGSG-- 111
Query: 112 HSSGGCC 118
SGGCC
Sbjct: 112 QHSGGCC 118
>gi|30387652 late cornified envelope 1C [Homo sapiens]
Length = 118
Score = 177 bits (450), Expect = 1e-45
Identities = 88/126 (69%), Positives = 89/126 (70%), Gaps = 16/126 (12%)
Query: 1 MSCQQSQQQCQPPPKCTPKCPPKC-TPKCPPKCPPKCPPQ---CSAP----CPPPVSSCC 52
MSCQQSQQQCQPPPKCTPKCPPKC TPKCPPKCPPKCPP CS C C
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGSC 60
Query: 53 GSSSGGCCSSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCCH 112
GSSSGGCCSS GGGCCLSHHR R+S RPQSS CC Q SGGSSCC GGSG
Sbjct: 61 GSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGCC----SQPSGGSSCC--GGGSG--Q 112
Query: 113 SSGGCC 118
SGGCC
Sbjct: 113 HSGGCC 118
>gi|30387654 late cornified envelope 1A [Homo sapiens]
Length = 110
Score = 174 bits (442), Expect = 1e-44
Identities = 83/119 (69%), Positives = 85/119 (71%), Gaps = 10/119 (8%)
Query: 1 MSCQQSQQQCQPPPKCTPKCPPKC-TPKCPPKCPPKCPPQCSAPCPPPVSSCCGSSSGGC 59
MSCQQSQQQCQPPPKCTPKCPPKC TPKCPPKCPPKCPP S+ C CCGSSSGG
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKCPP-VSSCCSVSSGGCCGSSSGGG 59
Query: 60 CSSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCCHSSGGCC 118
CSS GGGCCLSHHR +S R R QSS CC Q SGGSSCC G SGGCC
Sbjct: 60 CSSGGGGCCLSHHRRHRSHRHRLQSSGCC----SQPSGGSSCCGGDSG----QHSGGCC 110
>gi|30387656 late cornified envelope 1B [Homo sapiens]
Length = 118
Score = 173 bits (438), Expect = 3e-44
Identities = 85/126 (67%), Positives = 88/126 (69%), Gaps = 16/126 (12%)
Query: 1 MSCQQSQQQCQPPPKCTPKCPPKC-TPKCPPKCPPKCPPQ---CSAP----CPPPVSSCC 52
MSCQQ+QQQCQPPPKC PKCPPKC TP+CPPKCPPKCPP CS C C
Sbjct: 1 MSCQQNQQQCQPPPKCIPKCPPKCLTPRCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGSC 60
Query: 53 GSSSGGCCSSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCCH 112
GSSSGGCCSS GGGCCLSHHR R+S RPQSS CC Q SGGSSCC GGSG
Sbjct: 61 GSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGCC----SQPSGGSSCC--GGGSG--Q 112
Query: 113 SSGGCC 118
SGGCC
Sbjct: 113 HSGGCC 118
>gi|30387648 late cornified envelope 1D [Homo sapiens]
Length = 114
Score = 164 bits (416), Expect = 1e-41
Identities = 79/122 (64%), Positives = 81/122 (66%), Gaps = 12/122 (9%)
Query: 1 MSCQQSQQQCQPPPKCTPKCPPKC-TPKCPPKCPPK---CPPQCSAPCPPPVSSCCGSSS 56
MSCQQSQQQCQPPPKCTPKC PKC PKCPPKCPP C C CGS+S
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSGGGCGSNS 60
Query: 57 GGCCSSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCCHSSGG 116
GGCCSS GGGCCLSHHR +S RRRPQSS CC Q SGGSSCC G G SGG
Sbjct: 61 GGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCC----SQPSGGSSCC----GGGSSQHSGG 112
Query: 117 CC 118
CC
Sbjct: 113 CC 114
>gi|30387642 late cornified envelope 4A [Homo sapiens]
Length = 99
Score = 162 bits (410), Expect = 5e-41
Identities = 75/113 (66%), Positives = 83/113 (73%), Gaps = 16/113 (14%)
Query: 1 MSCQQSQQQCQPPPKCTPKCPPKCTPKCPPKCPPKCPPQCSAPCPPPVSSCCGSSSGGC- 59
MSCQQ+QQQCQPPPKC PK PPKCP +C++ CPPP+SSCCGSSSGGC
Sbjct: 1 MSCQQNQQQCQPPPKCPI-----------PKYPPKCPSKCASSCPPPISSCCGSSSGGCG 49
Query: 60 -CSSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCC 111
CSSEGGGCCLSHHR +S RP+SS+C GSGSGQQSGGS CC G GCC
Sbjct: 50 CCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCC---SGGGCC 99
>gi|30410033 late cornified envelope 3E [Homo sapiens]
Length = 92
Score = 120 bits (300), Expect = 3e-28
Identities = 62/111 (55%), Positives = 66/111 (59%), Gaps = 19/111 (17%)
Query: 1 MSCQQSQQQCQPPPKCTPKCPPKCTPKCPPKCPPKCPPQCSAPCPPPVSSCCGSSSGGCC 60
MSCQQ+Q+QCQPPPKC PKCPPK P QC PP SS C SSGGC
Sbjct: 1 MSCQQNQKQCQPPPKCPS-----------PKCPPKNPVQCL----PPASSGCAPSSGGCG 45
Query: 61 SSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCC 111
S GGC L+HHR RR Q S+ C GSGQQ GGS CCH SG GCC
Sbjct: 46 PSSEGGCFLNHHRRHHRCRR--QRSNSCDRGSGQQGGGSGCCHGSG--GCC 92
>gi|30410037 late cornified envelope 3C [Homo sapiens]
Length = 94
Score = 116 bits (290), Expect = 4e-27
Identities = 60/111 (54%), Positives = 64/111 (57%), Gaps = 17/111 (15%)
Query: 1 MSCQQSQQQCQPPPKCTPKCPPKCTPKCPPKCPPKCPPQCSAPCPPPVSSCCGSSSGGCC 60
MSCQQ+QQQCQPPP C PKCPPK P QC PP SS C SSGGC
Sbjct: 1 MSCQQNQQQCQPPPSCPS-----------PKCPPKSPAQCL----PPPSSDCALSSGGCG 45
Query: 61 SSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCC 111
S GCCLSHHR +S + R Q S+ C GSGQQ GGS C G GCC
Sbjct: 46 PSSESGCCLSHHRHFRSHQCRRQRSNSCDRGSGQQGGGS--CRGHGSGGCC 94
>gi|14211869 late cornified envelope 3D [Homo sapiens]
Length = 92
Score = 115 bits (289), Expect = 6e-27
Identities = 61/111 (54%), Positives = 64/111 (57%), Gaps = 19/111 (17%)
Query: 1 MSCQQSQQQCQPPPKCTPKCPPKCTPKCPPKCPPKCPPQCSAPCPPPVSSCCGSSSGGCC 60
MSCQQ+QQQCQPPPKC PKCPPK P QC PP SS C SSGGC
Sbjct: 1 MSCQQNQQQCQPPPKCPS-----------PKCPPKSPVQCL----PPASSGCAPSSGGCG 45
Query: 61 SSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCC 111
S GGC L+HHR RR Q + C GSGQQ GGS C H SG GCC
Sbjct: 46 PSSEGGCFLNHHRRHHRCRR--QRPNSCDRGSGQQGGGSGCGHGSG--GCC 92
>gi|30410041 late cornified envelope 3B [Homo sapiens]
Length = 95
Score = 114 bits (286), Expect = 1e-26
Identities = 61/113 (53%), Positives = 66/113 (58%), Gaps = 20/113 (17%)
Query: 1 MSCQQSQQQCQPPPKCTPKCPPKCTPKCPPKCPPKCPPQCSAPCPPPVSSCCGSSSGGCC 60
MSCQQ+QQQCQP PKC PKCPP+ SA C PP SSCC G CC
Sbjct: 1 MSCQQNQQQCQPLPKCPS---------------PKCPPKSSAQCLPPASSCCAPRPG-CC 44
Query: 61 S--SEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCC 111
S GGCCLSHHR +S R R QSS+ C GSGQQ G S C + SG GCC
Sbjct: 45 GGPSSEGGCCLSHHRCCRSHRCRRQSSNSCDRGSGQQDGASDCGYGSG--GCC 95
>gi|30410039 late cornified envelope 3A [Homo sapiens]
Length = 89
Score = 113 bits (282), Expect = 4e-26
Identities = 61/111 (54%), Positives = 65/111 (58%), Gaps = 22/111 (19%)
Query: 1 MSCQQSQQQCQPPPKCTPKCPPKCTPKCPPKCPPKCPPQCSAPCPPPVSSCCGSSSGGCC 60
MSCQQ+QQQCQPPPKC P K P QC PP SS C SSGGC
Sbjct: 1 MSCQQNQQQCQPPPKC----------------PAKSPAQCL----PPASSSCAPSSGGCG 40
Query: 61 SSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCC 111
S CCLSHHR R+S R R QSS+ C GSGQQ G SSC HSS +GCC
Sbjct: 41 PSSERSCCLSHHRCRRSHRCRCQSSNSCDRGSGQQGGSSSCGHSS--AGCC 89
>gi|83582817 small proline-rich protein 2E [Homo sapiens]
Length = 72
Score = 64.7 bits (156), Expect = 1e-11
Identities = 32/55 (58%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 4 QQSQQQCQPPPKC-TPKCPPKCTP-KCP-----PKCPPKCPP-QCSAPCPPPVSS 50
QQ +Q CQPPP C TPKCP C P KCP PKCP CPP QC CPP S
Sbjct: 6 QQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPPPKCPQPCPPQQCQQKCPPVTPS 60
Score = 55.1 bits (131), Expect = 1e-08
Identities = 25/43 (58%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 7 QQQCQPPPKCTPKCP-PKCTPKC-PPKCPPKC-PPQCSAPCPP 46
QQQC+ P + P CP PKC C PPKCP C PP+C PCPP
Sbjct: 5 QQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPPPKCPQPCPP 47
Score = 45.4 bits (106), Expect = 9e-06
Identities = 19/34 (55%), Positives = 21/34 (61%), Gaps = 6/34 (17%)
Query: 12 PPPKCTPKCPP-KCTPKCP-----PKCPPKCPPQ 39
PPPKC CPP +C KCP P C PKCPP+
Sbjct: 37 PPPKCPQPCPPQQCQQKCPPVTPSPPCQPKCPPK 70
Score = 33.1 bits (74), Expect = 0.048
Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 3/23 (13%)
Query: 4 QQSQQQCQP---PPKCTPKCPPK 23
QQ QQ+C P P C PKCPPK
Sbjct: 48 QQCQQKCPPVTPSPPCQPKCPPK 70
>gi|169212028 PREDICTED: keratin-associated protein 9-2-like 2-like
[Homo sapiens]
Length = 160
Score = 63.5 bits (153), Expect = 3e-11
Identities = 43/124 (34%), Positives = 48/124 (38%), Gaps = 19/124 (15%)
Query: 7 QQQCQPPPKCTPKCPPKC-------TPKCPPKCPPKC--PPQCSAPCPPPV---SSCCGS 54
Q C C P C P C T C P C C P CS PC P+ SSCCG
Sbjct: 39 QPSCCVSSCCQPYCHPTCCQNTCCRTTCCQPTCVTSCCQPSCCSTPCYQPICCGSSCCGQ 98
Query: 55 SSGGCCSSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCCHSS 114
+S G + C P R ++ C G QS GSSCC CC SS
Sbjct: 99 TSCGSSCGQSSSCA-----PVYCRRTCYHPTTVCLPGCLNQSCGSSCCQPCYCPACCVSS 153
Query: 115 GGCC 118
CC
Sbjct: 154 --CC 155
Score = 29.3 bits (64), Expect = 0.70
Identities = 25/67 (37%), Positives = 25/67 (37%), Gaps = 14/67 (20%)
Query: 2 SCQQSQQQCQPPPKCTPK-CPPKC---TPKCPPKC-PPKCPPQCSAPCPPP---VSSCCG 53
SC S C C P C C T C P C C C PC P VSSCC
Sbjct: 100 SCGSS---CGQSSSCAPVYCRRTCYHPTTVCLPGCLNQSCGSSCCQPCYCPACCVSSCCQ 156
Query: 54 SSSGGCC 60
S CC
Sbjct: 157 HS---CC 160
>gi|62945419 small proline-rich protein 2F [Homo sapiens]
Length = 72
Score = 63.2 bits (152), Expect = 4e-11
Identities = 31/55 (56%), Positives = 32/55 (58%), Gaps = 8/55 (14%)
Query: 4 QQSQQQCQPPPKC-TPKCP-----PKCTPKCPP-KCPPKCPP-QCSAPCPPPVSS 50
QQ +Q CQPPP C PKCP PKC CPP KCP CPP QC CPP S
Sbjct: 6 QQCKQPCQPPPVCPAPKCPEPCPPPKCPEPCPPSKCPQSCPPQQCQQKCPPVTPS 60
Score = 33.1 bits (74), Expect = 0.048
Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 3/23 (13%)
Query: 4 QQSQQQCQP---PPKCTPKCPPK 23
QQ QQ+C P P C PKCPPK
Sbjct: 48 QQCQQKCPPVTPSPPCQPKCPPK 70
>gi|5174693 small proline-rich protein 2A [Homo sapiens]
Length = 72
Score = 62.8 bits (151), Expect = 6e-11
Identities = 28/45 (62%), Positives = 30/45 (66%), Gaps = 5/45 (11%)
Query: 4 QQSQQQCQPPPKC-TPKCPPKCTPKCPPKCPPKC-PPQCSAPCPP 46
QQ +Q CQPPP C TPKCP C P PKCP C PP+C PCPP
Sbjct: 6 QQCKQPCQPPPVCPTPKCPEPCPP---PKCPEPCPPPKCPQPCPP 47
Score = 37.7 bits (86), Expect = 0.002
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 12 PPPKCTPKCPPKCTPKCPPKCPPKCP-PQCSAPCPP 46
PPPKC CPP+ +C K PP P P C + PP
Sbjct: 37 PPPKCPQPCPPQ---QCQQKYPPVTPSPPCQSKYPP 69
Score = 25.8 bits (55), Expect = 7.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Query: 3 CQQSQQQCQPPPKCTPKCPPK 23
CQQ P P C K PPK
Sbjct: 50 CQQKYPPVTPSPPCQSKYPPK 70
>gi|62955831 small proline-rich protein 2B [Homo sapiens]
Length = 72
Score = 62.8 bits (151), Expect = 6e-11
Identities = 28/45 (62%), Positives = 30/45 (66%), Gaps = 5/45 (11%)
Query: 4 QQSQQQCQPPPKC-TPKCPPKCTPKCPPKCPPKC-PPQCSAPCPP 46
QQ +Q CQPPP C TPKCP C P PKCP C PP+C PCPP
Sbjct: 6 QQCKQPCQPPPVCPTPKCPEPCPP---PKCPEPCPPPKCPQPCPP 47
Score = 37.0 bits (84), Expect = 0.003
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 6/34 (17%)
Query: 12 PPPKCTPKCPP-KCTPKCP-----PKCPPKCPPQ 39
PPPKC CPP +C K P P C PK PP+
Sbjct: 37 PPPKCPQPCPPQQCQQKYPPVTPSPPCQPKYPPK 70
Score = 28.9 bits (63), Expect = 0.91
Identities = 11/21 (52%), Positives = 11/21 (52%)
Query: 3 CQQSQQQCQPPPKCTPKCPPK 23
CQQ P P C PK PPK
Sbjct: 50 CQQKYPPVTPSPPCQPKYPPK 70
>gi|56699492 small proline-rich protein 2D [Homo sapiens]
Length = 72
Score = 62.8 bits (151), Expect = 6e-11
Identities = 28/45 (62%), Positives = 30/45 (66%), Gaps = 5/45 (11%)
Query: 4 QQSQQQCQPPPKC-TPKCPPKCTPKCPPKCPPKCP-PQCSAPCPP 46
QQ +Q CQPPP C TPKCP C P PKCP CP P+C PCPP
Sbjct: 6 QQCKQPCQPPPVCPTPKCPEPCPP---PKCPEPCPSPKCPQPCPP 47
Score = 33.1 bits (74), Expect = 0.048
Identities = 12/21 (57%), Positives = 12/21 (57%)
Query: 3 CQQSQQQCQPPPKCTPKCPPK 23
CQQ P P C PKCPPK
Sbjct: 50 CQQKYPPVTPSPPCQPKCPPK 70
Score = 29.6 bits (65), Expect = 0.53
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Query: 8 QQCQ---PPPKCTPKCPPKCTPK 27
QQCQ PP +P C PKC PK
Sbjct: 48 QQCQQKYPPVTPSPPCQPKCPPK 70
>gi|9506923 cysteine-rich C-terminal 1 [Homo sapiens]
Length = 99
Score = 62.4 bits (150), Expect = 7e-11
Identities = 36/90 (40%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 33 PPKCPPQCSAPCPPPVSSCCGSSSG-----GCCSSEGGGCCLSHHRPRQSLRRRPQSSSC 87
P CP P P SSCCGS G GCC S CC R RRR +SS C
Sbjct: 21 PAPCPAPAPTPAPASSSSCCGSGRGCCGDSGCCGSSSTSCCCFPRR-----RRRQRSSGC 75
Query: 88 CGSGSGQQSGGSSCCHSSGGSGCCHSSGGC 117
C G G Q S ++ SGCC GC
Sbjct: 76 CCCGGGSQRSQRS---NNRSSGCC---SGC 99
Score = 36.2 bits (82), Expect = 0.006
Identities = 19/35 (54%), Positives = 19/35 (54%), Gaps = 10/35 (28%)
Query: 84 SSSCCGSGSGQQSGGSSCCHSSGGSGCCHSSGGCC 118
SSSCCGSG G CC G SGCC SS C
Sbjct: 36 SSSCCGSGRG-------CC---GDSGCCGSSSTSC 60
>gi|58082087 late cornified envelope-like proline-rich 1 [Homo
sapiens]
Length = 98
Score = 62.4 bits (150), Expect = 7e-11
Identities = 25/48 (52%), Positives = 28/48 (58%), Gaps = 8/48 (16%)
Query: 8 QQCQPPPKCTP-------KCPPK-CTPKCPPKCPPKCPPQCSAPCPPP 47
++C PPKC P CPP+ CT CPPKCP CP C PCPPP
Sbjct: 50 EKCPAPPKCLPCPSQSPSSCPPQPCTKPCPPKCPSSCPHACPPPCPPP 97
Score = 51.6 bits (122), Expect = 1e-07
Identities = 20/34 (58%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 5 QSQQQCQPPPKCTPKCPPKCTPKCPPKCPPKCPP 38
QS C P P CT CPPKC CP CPP CPP
Sbjct: 64 QSPSSCPPQP-CTKPCPPKCPSSCPHACPPPCPP 96
Score = 51.2 bits (121), Expect = 2e-07
Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 15/63 (23%)
Query: 4 QQSQQQCQPP------PKCTPKCP-------PKCTPKCPPKCPPKCPPQ-CSAPCPPPVS 49
Q+ + +CQP +C KCP PKC P CP + P CPPQ C+ PCPP
Sbjct: 25 QKCESKCQPSCLKKLLQRCFEKCPWEKCPAPPKCLP-CPSQSPSSCPPQPCTKPCPPKCP 83
Query: 50 SCC 52
S C
Sbjct: 84 SSC 86
>gi|239756792 PREDICTED: hypothetical protein [Homo sapiens]
Length = 188
Score = 60.5 bits (145), Expect = 3e-10
Identities = 43/118 (36%), Positives = 47/118 (39%), Gaps = 39/118 (33%)
Query: 10 CQPPPKCTPKCPPKCTPKCPPKCPPKCPPQC-------SAPCPPP-VSSCCGSSSGGCCS 61
C P C P C C P C C P C P C + C P V+SCC S CCS
Sbjct: 32 CSSTPCCQPSC---CVPSC---CQPCCHPTCCQNTCCRTTCCQPTCVASCCQPS---CCS 82
Query: 62 SEGGGCCLSHHRPRQSLRRRPQSSSCCGSGS-GQQSGGSSCCHSSGGSGCCHSSGGCC 118
+ CC +CCGS GQ S GSSCC GS CC CC
Sbjct: 83 TP---CC---------------QPTCCGSSCCGQTSCGSSCCQPICGSSCCQP---CC 119
>gi|239751312 PREDICTED: hypothetical protein [Homo sapiens]
Length = 188
Score = 60.5 bits (145), Expect = 3e-10
Identities = 43/118 (36%), Positives = 47/118 (39%), Gaps = 39/118 (33%)
Query: 10 CQPPPKCTPKCPPKCTPKCPPKCPPKCPPQC-------SAPCPPP-VSSCCGSSSGGCCS 61
C P C P C C P C C P C P C + C P V+SCC S CCS
Sbjct: 32 CSSTPCCQPSC---CVPSC---CQPCCHPTCCQNTCCRTTCCQPTCVASCCQPS---CCS 82
Query: 62 SEGGGCCLSHHRPRQSLRRRPQSSSCCGSGS-GQQSGGSSCCHSSGGSGCCHSSGGCC 118
+ CC +CCGS GQ S GSSCC GS CC CC
Sbjct: 83 TP---CC---------------QPTCCGSSCCGQTSCGSSCCQPICGSSCCQP---CC 119
>gi|239745809 PREDICTED: hypothetical protein [Homo sapiens]
Length = 188
Score = 60.5 bits (145), Expect = 3e-10
Identities = 43/118 (36%), Positives = 47/118 (39%), Gaps = 39/118 (33%)
Query: 10 CQPPPKCTPKCPPKCTPKCPPKCPPKCPPQC-------SAPCPPP-VSSCCGSSSGGCCS 61
C P C P C C P C C P C P C + C P V+SCC S CCS
Sbjct: 32 CSSTPCCQPSC---CVPSC---CQPCCHPTCCQNTCCRTTCCQPTCVASCCQPS---CCS 82
Query: 62 SEGGGCCLSHHRPRQSLRRRPQSSSCCGSGS-GQQSGGSSCCHSSGGSGCCHSSGGCC 118
+ CC +CCGS GQ S GSSCC GS CC CC
Sbjct: 83 TP---CC---------------QPTCCGSSCCGQTSCGSSCCQPICGSSCCQP---CC 119
>gi|169212012 PREDICTED: keratin-associated protein 9-2-like 1-like
[Homo sapiens]
Length = 169
Score = 60.1 bits (144), Expect = 4e-10
Identities = 45/124 (36%), Positives = 50/124 (40%), Gaps = 19/124 (15%)
Query: 7 QQQCQPPPKCTPKCPPKC-------TPKCPPKCPPKC--PPQCSAPCPPPVSSCCGSSSG 57
Q C C P C P C T C P C C P CS PC P+ CCGSS
Sbjct: 34 QPSCCVSSCCQPCCHPTCCQNTCCRTTCCQPTCVTSCCQPSCCSTPCCQPI--CCGSS-- 89
Query: 58 GCC--SSEGGGCCL-SHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCCHSS 114
CC +S G CC S P R +S G QS GSSCC CC ++
Sbjct: 90 -CCGQTSCGSSCCQPSSCAPIYCRRTCYHPTSVYLPGCLNQSCGSSCCQPCCRPACCETT 148
Query: 115 GGCC 118
CC
Sbjct: 149 --CC 150
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.509
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,721,656
Number of Sequences: 37866
Number of extensions: 624443
Number of successful extensions: 11995
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 638
Number of HSP's that attempted gapping in prelim test: 4965
Number of HSP's gapped (non-prelim): 4745
length of query: 118
length of database: 18,247,518
effective HSP length: 88
effective length of query: 30
effective length of database: 14,915,310
effective search space: 447459300
effective search space used: 447459300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.