Guide to the Human Genome
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Name: LELP1 Sequence: fasta or formatted (98aa) NCBI GI: 58082087
Description:

late cornified envelope-like proline-rich 1

Referenced in:

Late Cornified Envelope Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.0          2           1
 C cysteine           17.3         17           1
 D aspartate           4.1          4           2
 E glutamate           6.1          6           1
 F phenylalanine       1.0          1           1
 G glycine             0.0          0           0
 H histidine           1.0          1           1
 I isoleucine          0.0          0           0
 K lysine             14.3         14           2
 L leucine             4.1          4           2
 M methionine          1.0          1           1
 N asparagine          2.0          2           1
 P proline            25.5         25           3
 Q glutamine           5.1          5           1
 R arginine            1.0          1           1
 S serine             12.2         12           2
 T threonine           2.0          2           1
 V valine              0.0          0           0
 W tryptophan          1.0          1           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   late cornified envelope-like proline-rich 1 
LCE5A                 0.174   late cornified envelope 5A 
SPRR2E                0.164   small proline-rich protein 2E 
SPRR2F                0.155   small proline-rich protein 2F 
SPRR2G                0.150   small proline-rich protein 2G 
LCE2D                 0.136   late cornified envelope 2D 
SPRR2A                0.131   small proline-rich protein 2A 
SPRR2B                0.131   small proline-rich protein 2B 
LCE2C                 0.127   late cornified envelope 2C 
SPRR2D                0.127   small proline-rich protein 2D 
LCE2A                 0.122   late cornified envelope 2A 
LOC100292632          0.122   PREDICTED: hypothetical protein 
LCE1A                 0.122   late cornified envelope 1A 
LCE1F                 0.122   late cornified envelope 1F 
LCE1E                 0.122   late cornified envelope 1E 
LCE1C                 0.122   late cornified envelope 1C 
LCE2B                 0.117   late cornified envelope 2B 
KRTAP10-6             0.113   keratin associated protein 10-6 
KRTAP10-5             0.108   keratin associated protein 10-5 
LCE1B                 0.103   late cornified envelope 1B 
MLL4                  0.103   myeloid/lymphoid or mixed-lineage leukemia 4 
KRTAP10-1             0.103   keratin associated protein 10-1 
KRTAP10-8             0.099   keratin associated protein 10-8 
LOC728318             0.099   PREDICTED: hypothetical protein 
LOC728318             0.099   PREDICTED: hypothetical protein 
LOC728318             0.099   PREDICTED: hypothetical protein 
KRTAP10-11            0.094   keratin associated protein 10-11 
KPRP                  0.094   keratinocyte proline-rich protein 
LOC100131696          0.089   PREDICTED: keratin associated protein 
LOC100288060          0.089   PREDICTED: hypothetical protein XP_002343557 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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