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Search of human proteins with 30387648
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30387648 late cornified envelope 1D [Homo sapiens]
(114 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30387648 late cornified envelope 1D [Homo sapiens] 271 1e-73
gi|239752912 PREDICTED: hypothetical protein [Homo sapiens] 251 7e-68
gi|30387650 late cornified envelope 1E [Homo sapiens] 251 7e-68
gi|30387652 late cornified envelope 1C [Homo sapiens] 244 8e-66
gi|30387646 late cornified envelope 1F [Homo sapiens] 243 3e-65
gi|30387656 late cornified envelope 1B [Homo sapiens] 237 1e-63
gi|30387654 late cornified envelope 1A [Homo sapiens] 222 6e-59
gi|30410043 late cornified envelope 2D [Homo sapiens] 177 1e-45
gi|7657685 late cornified envelope 2B [Homo sapiens] 173 2e-44
gi|30410047 late cornified envelope 2C [Homo sapiens] 171 9e-44
gi|30410045 late cornified envelope 2A [Homo sapiens] 167 2e-42
gi|30410035 late cornified envelope 5A [Homo sapiens] 164 1e-41
gi|30387642 late cornified envelope 4A [Homo sapiens] 140 2e-34
gi|14211869 late cornified envelope 3D [Homo sapiens] 107 2e-24
gi|30410037 late cornified envelope 3C [Homo sapiens] 106 3e-24
gi|30410041 late cornified envelope 3B [Homo sapiens] 106 3e-24
gi|30410033 late cornified envelope 3E [Homo sapiens] 103 2e-23
gi|30410039 late cornified envelope 3A [Homo sapiens] 96 6e-21
gi|9506923 cysteine-rich C-terminal 1 [Homo sapiens] 65 2e-11
gi|13994372 keratin associated protein 17-1 [Homo sapiens] 61 2e-10
gi|51972220 keratin associated protein 5-2 [Homo sapiens] 56 5e-09
gi|123173777 keratin associated protein 5-8 [Homo sapiens] 55 9e-09
gi|5174693 small proline-rich protein 2A [Homo sapiens] 55 1e-08
gi|62955831 small proline-rich protein 2B [Homo sapiens] 55 1e-08
gi|83582817 small proline-rich protein 2E [Homo sapiens] 55 1e-08
gi|60279697 keratin associated protein 5-7 [Homo sapiens] 54 2e-08
gi|62945419 small proline-rich protein 2F [Homo sapiens] 54 3e-08
gi|123702038 keratin associated protein 5-9 [Homo sapiens] 54 3e-08
gi|60593038 keratin associated protein 5-4 [Homo sapiens] 53 5e-08
gi|60593040 keratin associated protein 5-10 [Homo sapiens] 53 6e-08
>gi|30387648 late cornified envelope 1D [Homo sapiens]
Length = 114
Score = 271 bits (692), Expect = 1e-73
Identities = 114/114 (100%), Positives = 114/114 (100%)
Query: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSGGGCGSNS 60
MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSGGGCGSNS
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSGGGCGSNS 60
Query: 61 GGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCCSQPSGGSSCCGGGSSQHSGGCC 114
GGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCCSQPSGGSSCCGGGSSQHSGGCC
Sbjct: 61 GGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCCSQPSGGSSCCGGGSSQHSGGCC 114
>gi|239752912 PREDICTED: hypothetical protein [Homo sapiens]
Length = 118
Score = 251 bits (642), Expect = 7e-68
Identities = 107/118 (90%), Positives = 108/118 (91%), Gaps = 4/118 (3%)
Query: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPP----VSSCCSVSSGGCCGSSSGGGC 56
MSCQQSQQQCQPPPKCTPKC PKCP PKCPPKCPP VSSCCSVSSGGCCGSSSGG C
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGSC 60
Query: 57 GSNSGGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCCSQPSGGSSCCGGGSSQHSGGCC 114
GS+SGGCCSSGGGGCCLSHHR HRSHR RPQSSDCCSQPSGGSSCCGGGS QHSGGCC
Sbjct: 61 GSSSGGCCSSGGGGCCLSHHRHHRSHRHRPQSSDCCSQPSGGSSCCGGGSGQHSGGCC 118
>gi|30387650 late cornified envelope 1E [Homo sapiens]
Length = 118
Score = 251 bits (642), Expect = 7e-68
Identities = 107/118 (90%), Positives = 108/118 (91%), Gaps = 4/118 (3%)
Query: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPP----VSSCCSVSSGGCCGSSSGGGC 56
MSCQQSQQQCQPPPKCTPKC PKCP PKCPPKCPP VSSCCSVSSGGCCGSSSGG C
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGSC 60
Query: 57 GSNSGGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCCSQPSGGSSCCGGGSSQHSGGCC 114
GS+SGGCCSSGGGGCCLSHHR HRSHR RPQSSDCCSQPSGGSSCCGGGS QHSGGCC
Sbjct: 61 GSSSGGCCSSGGGGCCLSHHRHHRSHRHRPQSSDCCSQPSGGSSCCGGGSGQHSGGCC 118
>gi|30387652 late cornified envelope 1C [Homo sapiens]
Length = 118
Score = 244 bits (624), Expect = 8e-66
Identities = 105/118 (88%), Positives = 106/118 (89%), Gaps = 4/118 (3%)
Query: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPP----VSSCCSVSSGGCCGSSSGGGC 56
MSCQQSQQQCQPPPKCTPKC PKCP PKCPPKCPP VSSCCSVSSGGCCGSSSGG C
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGSC 60
Query: 57 GSNSGGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCCSQPSGGSSCCGGGSSQHSGGCC 114
GS+SGGCCSSGGGGCCLSHHRR RSH RPQSS CCSQPSGGSSCCGGGS QHSGGCC
Sbjct: 61 GSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGCCSQPSGGSSCCGGGSGQHSGGCC 118
>gi|30387646 late cornified envelope 1F [Homo sapiens]
Length = 118
Score = 243 bits (619), Expect = 3e-65
Identities = 104/118 (88%), Positives = 104/118 (88%), Gaps = 4/118 (3%)
Query: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPP----VSSCCSVSSGGCCGSSSGGGC 56
MSCQQSQQQCQPPPKCTPKC PKCP PKCPPKCPP VSSCCSVSSGGCCGSSSGG C
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGCC 60
Query: 57 GSNSGGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCCSQPSGGSSCCGGGSSQHSGGCC 114
S GGCCSSGGGGCCLSHHRR RSHR RPQSSDCCSQPS GSSCCGGGS QHSGGCC
Sbjct: 61 SSGGGGCCSSGGGGCCLSHHRRRRSHRHRPQSSDCCSQPSAGSSCCGGGSGQHSGGCC 118
>gi|30387656 late cornified envelope 1B [Homo sapiens]
Length = 118
Score = 237 bits (605), Expect = 1e-63
Identities = 102/118 (86%), Positives = 104/118 (88%), Gaps = 4/118 (3%)
Query: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAP----KCPPKCPPVSSCCSVSSGGCCGSSSGGGC 56
MSCQQ+QQQCQPPPKC PKC PKC P KCPPKCPPVSSCCSVSSGGCCGSSSGG C
Sbjct: 1 MSCQQNQQQCQPPPKCIPKCPPKCLTPRCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGSC 60
Query: 57 GSNSGGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCCSQPSGGSSCCGGGSSQHSGGCC 114
GS+SGGCCSSGGGGCCLSHHRR RSH RPQSS CCSQPSGGSSCCGGGS QHSGGCC
Sbjct: 61 GSSSGGCCSSGGGGCCLSHHRRRRSHCHRPQSSGCCSQPSGGSSCCGGGSGQHSGGCC 118
>gi|30387654 late cornified envelope 1A [Homo sapiens]
Length = 110
Score = 222 bits (565), Expect = 6e-59
Identities = 99/118 (83%), Positives = 99/118 (83%), Gaps = 12/118 (10%)
Query: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPP----VSSCCSVSSGGCCGSSSGGGC 56
MSCQQSQQQCQPPPKCTPKC PKCP PKCPPKCPP VSSCCSVSSGGCCGSSSGGGC
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKCPTPKCPPKCPPKCPPVSSCCSVSSGGCCGSSSGGGC 60
Query: 57 GSNSGGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCCSQPSGGSSCCGGGSSQHSGGCC 114
SSGGGGCCLSHHRRHRSHR R QSS CCSQPSGGSSCCGG S QHSGGCC
Sbjct: 61 --------SSGGGGCCLSHHRRHRSHRHRLQSSGCCSQPSGGSSCCGGDSGQHSGGCC 110
>gi|30410043 late cornified envelope 2D [Homo sapiens]
Length = 110
Score = 177 bits (450), Expect = 1e-45
Identities = 81/116 (69%), Positives = 85/116 (73%), Gaps = 8/116 (6%)
Query: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPPVSSC-CSVSSGGCCGSSSGGGCGSN 59
MSCQQ+QQQCQPPPKC PKCTPKCP PKCPPKCPP CS + CCG SSG CG +
Sbjct: 1 MSCQQNQQQCQPPPKCPPKCTPKCP-PKCPPKCPPQCPAPCSPAVSSCCGPSSGSCCGPS 59
Query: 60 SGGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCC-SQPSGGSSCCGGGSSQHSGGCC 114
SGGCCSSGGGGCCLSHHR HRRR QS DCC S+PSG S CC SGGCC
Sbjct: 60 SGGCCSSGGGGCCLSHHRPRLFHRRRHQSPDCCESEPSGASGCC-----HSSGGCC 110
>gi|7657685 late cornified envelope 2B [Homo sapiens]
Length = 110
Score = 173 bits (439), Expect = 2e-44
Identities = 79/116 (68%), Positives = 85/116 (73%), Gaps = 8/116 (6%)
Query: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKC-PPVSSCCSVSSGGCCGSSSGGGCGSN 59
MSCQQ+QQQCQPPPKC PKCTPKCP PKCPPKC P + CS + CCG SGG CG +
Sbjct: 1 MSCQQNQQQCQPPPKCPPKCTPKCP-PKCPPKCLPQCPAPCSPAVSSCCGPISGGCCGPS 59
Query: 60 SGGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCC-SQPSGGSSCCGGGSSQHSGGCC 114
SGGCC+SG GGCCLSHHR HRRR QS DCC S+PSGGS CC SGGCC
Sbjct: 60 SGGCCNSGAGGCCLSHHRPRLFHRRRHQSPDCCESEPSGGSGCC-----HSSGGCC 110
>gi|30410047 late cornified envelope 2C [Homo sapiens]
Length = 110
Score = 171 bits (434), Expect = 9e-44
Identities = 79/116 (68%), Positives = 84/116 (72%), Gaps = 8/116 (6%)
Query: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPP-VSSCCSVSSGGCCGSSSGGGCGSN 59
MSCQQ+QQQCQPPPKC PKCTPKCP PKCPPKCPP + C + CCG SSG CG +
Sbjct: 1 MSCQQNQQQCQPPPKCPPKCTPKCP-PKCPPKCPPQCPAPCFPAVSSCCGPSSGSCCGPS 59
Query: 60 SGGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCC-SQPSGGSSCCGGGSSQHSGGCC 114
SGGCCSSG GGC LSHHR HRRR QS DCC S+PSGGS CC SGGCC
Sbjct: 60 SGGCCSSGAGGCSLSHHRPRLFHRRRHQSPDCCESEPSGGSGCC-----HSSGGCC 110
>gi|30410045 late cornified envelope 2A [Homo sapiens]
Length = 106
Score = 167 bits (423), Expect = 2e-42
Identities = 80/120 (66%), Positives = 83/120 (69%), Gaps = 20/120 (16%)
Query: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCP-----PVSSCCSVSSGGCCGSSSGGG 55
MSCQQ+QQQCQPPPKC PKC PKCP PKC P+CP PVSSCC SSGGCCGSSSGG
Sbjct: 1 MSCQQNQQQCQPPPKCPPKCPPKCP-PKCRPQCPAPCPPPVSSCCGPSSGGCCGSSSGG- 58
Query: 56 CGSNSGGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCCS-QPSGGSSCCGGGSSQHSGGCC 114
CCSSGGGGCCLSHHR HR R QS DCC +PSGGS CC SG CC
Sbjct: 59 -------CCSSGGGGCCLSHHRPRLFHRHRHQSPDCCECEPSGGSGCC-----HSSGDCC 106
>gi|30410035 late cornified envelope 5A [Homo sapiens]
Length = 118
Score = 164 bits (416), Expect = 1e-41
Identities = 79/122 (64%), Positives = 81/122 (66%), Gaps = 12/122 (9%)
Query: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSGGGCGSNS 60
MSCQQSQQQCQPPPKCTPKC PKC PKCPPKCPP C C CGS+S
Sbjct: 1 MSCQQSQQQCQPPPKCTPKCPPKC-TPKCPPKCPPK---CPPQCSAPCPPPVSSCCGSSS 56
Query: 61 GGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCC----SQPSGGSSCC----GGGSSQHSGG 112
GGCCSS GGGCCLSHHR +S RRRPQSS CC Q SGGSSCC G G SGG
Sbjct: 57 GGCCSSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCCHSSGG 116
Query: 113 CC 114
CC
Sbjct: 117 CC 118
>gi|30387642 late cornified envelope 4A [Homo sapiens]
Length = 99
Score = 140 bits (353), Expect = 2e-34
Identities = 71/120 (59%), Positives = 76/120 (63%), Gaps = 27/120 (22%)
Query: 1 MSCQQSQQQCQPPPKCT-PKCTPKCPAPKCPPKCPP-VSSCCSVSSGGCCGSSSGGGCGS 58
MSCQQ+QQQCQPPPKC PK PKCP+ KC CPP +SSCC SSGGC
Sbjct: 1 MSCQQNQQQCQPPPKCPIPKYPPKCPS-KCASSCPPPISSCCGSSSGGC----------- 48
Query: 59 NSGGCCSSGGGGCCLSHHRRHRSHRRRPQSSDC----CSQPSGGSSCCGGGSSQHSGGCC 114
GCCSS GGGCCLSHHR HRSH RP+SS+C Q SGGS CC G GGCC
Sbjct: 49 ---GCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSGSGQQSGGSGCCSG------GGCC 99
>gi|14211869 late cornified envelope 3D [Homo sapiens]
Length = 92
Score = 107 bits (267), Expect = 2e-24
Identities = 58/115 (50%), Positives = 64/115 (55%), Gaps = 24/115 (20%)
Query: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSGGGCGSNS 60
MSCQQ+QQQCQPPPKC P+PKCPPK P C + GC +S
Sbjct: 1 MSCQQNQQQCQPPPKC--------PSPKCPPKSPVQ-----------CLPPASSGCAPSS 41
Query: 61 GGCCSSGGGGCCLSHHRR-HRSHRRRPQSSDCCSQPSGGSSCCGGGSSQHSGGCC 114
GGC S GGC L+HHRR HR R+RP S D S GG S CG G SGGCC
Sbjct: 42 GGCGPSSEGGCFLNHHRRHHRCRRQRPNSCDRGSGQQGGGSGCGHG----SGGCC 92
>gi|30410037 late cornified envelope 3C [Homo sapiens]
Length = 94
Score = 106 bits (265), Expect = 3e-24
Identities = 61/118 (51%), Positives = 69/118 (58%), Gaps = 28/118 (23%)
Query: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKC-PPVSSCCSVSSGGCCGSSSGGGCGSN 59
MSCQQ+QQQCQPPP C +PKCP PK P +C PP SS C++SSGGC SS G
Sbjct: 1 MSCQQNQQQCQPPPSCP---SPKCP-PKSPAQCLPPPSSDCALSSGGCGPSSESG----- 51
Query: 60 SGGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCCSQPS---GGSSCCGGGSSQHSGGCC 114
CCLSHHR RSH+ R Q S+ C + S GG SC G G SGGCC
Sbjct: 52 -----------CCLSHHRHFRSHQCRRQRSNSCDRGSGQQGGGSCRGHG----SGGCC 94
>gi|30410041 late cornified envelope 3B [Homo sapiens]
Length = 95
Score = 106 bits (265), Expect = 3e-24
Identities = 62/122 (50%), Positives = 68/122 (55%), Gaps = 35/122 (28%)
Query: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKC-----PPVSSCCSVSSGGCCGSSSGGG 55
MSCQQ+QQQCQP PKCP+PKCPPK PP SSCC+ GCCG
Sbjct: 1 MSCQQNQQQCQP--------LPKCPSPKCPPKSSAQCLPPASSCCA-PRPGCCGG----- 46
Query: 56 CGSNSGGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCCSQPSG---GSSCCGGGSSQHSGG 112
S GGCCLSHHR RSHR R QSS+ C + SG G+S CG G SGG
Sbjct: 47 ---------PSSEGGCCLSHHRCCRSHRCRRQSSNSCDRGSGQQDGASDCGYG----SGG 93
Query: 113 CC 114
CC
Sbjct: 94 CC 95
>gi|30410033 late cornified envelope 3E [Homo sapiens]
Length = 92
Score = 103 bits (258), Expect = 2e-23
Identities = 57/118 (48%), Positives = 64/118 (54%), Gaps = 30/118 (25%)
Query: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSGGGCGSNS 60
MSCQQ+Q+QCQPPPKC P+PKCPPK P C + GC +S
Sbjct: 1 MSCQQNQKQCQPPPKC--------PSPKCPPKNPVQ-----------CLPPASSGCAPSS 41
Query: 61 GGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCC----SQPSGGSSCCGGGSSQHSGGCC 114
GGC S GGC L+HHRRH HR R Q S+ C Q GGS CC G SGGCC
Sbjct: 42 GGCGPSSEGGCFLNHHRRH--HRCRRQRSNSCDRGSGQQGGGSGCCHG-----SGGCC 92
>gi|30410039 late cornified envelope 3A [Homo sapiens]
Length = 89
Score = 95.9 bits (237), Expect = 6e-21
Identities = 56/117 (47%), Positives = 61/117 (52%), Gaps = 31/117 (26%)
Query: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSGGGCGSNS 60
MSCQQ+QQQCQPPPKC K +C PP SS C+ SSGGC SS
Sbjct: 1 MSCQQNQQQCQPPPKCPAKSPAQC--------LPPASSSCAPSSGGCGPSSERS------ 46
Query: 61 GGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCCSQPS---GGSSCCGGGSSQHSGGCC 114
CCLSHHR RSHR R QSS+ C + S GGSS CG S GCC
Sbjct: 47 ----------CCLSHHRCRRSHRCRCQSSNSCDRGSGQQGGSSSCG----HSSAGCC 89
>gi|9506923 cysteine-rich C-terminal 1 [Homo sapiens]
Length = 99
Score = 64.7 bits (156), Expect = 2e-11
Identities = 44/120 (36%), Positives = 49/120 (40%), Gaps = 30/120 (25%)
Query: 1 MSCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSGGGCGSNS 60
MS QQS + K + + CPAP P SSCC GCCG S
Sbjct: 1 MSSQQSAVSAKGFSKGSSQGPAPCPAPAPTPAPASSSSCCGSGR-GCCGDS--------- 50
Query: 61 GGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCCSQPSGGSSCCGGG------SSQHSGGCC 114
GCC S CC R RRR +SS CC CCGGG S+ S GCC
Sbjct: 51 -GCCGSSSTSCCCFPRR-----RRRQRSSGCC--------CCGGGSQRSQRSNNRSSGCC 96
>gi|13994372 keratin associated protein 17-1 [Homo sapiens]
Length = 105
Score = 60.8 bits (146), Expect = 2e-10
Identities = 36/102 (35%), Positives = 37/102 (36%), Gaps = 29/102 (28%)
Query: 10 CQPPPKCTPKCTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSGGG------CGSNSGGC 63
C C +C C P C C SCC GC GS GG CGS GGC
Sbjct: 12 CTQEQNCCEEC---CCQPGC---CGCCGSCCGCGGSGCGGSGCGGSCCGSSCCGSGCGGC 65
Query: 64 --CSSGGGGCCLSHHRRHRSHRRRPQSSDCCSQPSGGSSCCG 103
C GGGCC S CC GS CCG
Sbjct: 66 GGCGGCGGGCC---------------GSSCCGSSCCGSGCCG 92
Score = 52.0 bits (123), Expect = 1e-07
Identities = 35/103 (33%), Positives = 37/103 (35%), Gaps = 32/103 (31%)
Query: 13 PPKCTPKCTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSG-GGCGSNSGGCCSSGGGGC 71
P C CT + C +C CC GCCGS G GG G GC GG C
Sbjct: 5 PGDCFTCCTQE---QNCCEEC-----CCQPGCCGCCGSCCGCGGSGCGGSGC----GGSC 52
Query: 72 CLSHHRRHRSHRRRPQSSDCCSQPSGGSSCCGGGSSQHSGGCC 114
C S CC GG CGG GGCC
Sbjct: 53 C---------------GSSCCGSGCGGCGGCGG----CGGGCC 76
Score = 33.9 bits (76), Expect = 0.029
Identities = 27/88 (30%), Positives = 30/88 (34%), Gaps = 23/88 (26%)
Query: 2 SCQQSQQQCQPPPKCTPKCT-----------PKCPAPKCPPKCPPVSSCCSVSSGGC--- 47
+C +Q C C P C C C C SSCC GGC
Sbjct: 10 TCCTQEQNCCEECCCQPGCCGCCGSCCGCGGSGCGGSGCGGSCCG-SSCCGSGCGGCGGC 68
Query: 48 --CGSS-SGGGCGSNSGGCCSSGGGGCC 72
CG G C +S CC G GCC
Sbjct: 69 GGCGGGCCGSSCCGSS--CC---GSGCC 91
>gi|51972220 keratin associated protein 5-2 [Homo sapiens]
Length = 177
Score = 56.2 bits (134), Expect = 5e-09
Identities = 39/103 (37%), Positives = 42/103 (40%), Gaps = 24/103 (23%)
Query: 20 CTPKCPAPKC--PPKCPPVSSCCSVSSGGCCGSSSG-GGCGSNSGGCCSSGG--GGCCLS 74
C +C P C P C V +C S G C GS G G CG + GGC S GG GGC
Sbjct: 52 CGSRCYVPVCCCKPVCSWVPACSCTSCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGC--- 108
Query: 75 HHRRHRSHRRRPQSSDCCSQPSGGSSCC---GGGSSQHSGGCC 114
S CSQ S CC G GSS CC
Sbjct: 109 -------------GSCGCSQSSCCKPCCCSSGCGSSCCQSSCC 138
Score = 45.1 bits (105), Expect = 1e-05
Identities = 34/96 (35%), Positives = 36/96 (37%), Gaps = 18/96 (18%)
Query: 29 CPPKCPPVSSCCSVSSGGCCGSSSG-GGCGSNSGGCCSSGGG--------GCCLSHHRRH 79
C C S C GC G SG GGCGS GGC SS GG CC +
Sbjct: 10 CGSGCGGCGSSCGGCGSGCGGCGSGRGGCGSGCGGCSSSCGGCGSRCYVPVCCC---KPV 66
Query: 80 RSHRRRPQSSDC--CSQPSGGSSCCGGGSSQHSGGC 113
S + C C GG CGG GGC
Sbjct: 67 CSWVPACSCTSCGSCGGSKGGCGSCGGS----KGGC 98
Score = 44.3 bits (103), Expect = 2e-05
Identities = 31/75 (41%), Positives = 33/75 (44%), Gaps = 20/75 (26%)
Query: 46 GCCGSSSG-----GGCGSNSGGCCSSGGGGCCLSHHRRHRSHRRRPQSSDCCSQPSGGSS 100
GCCG S G GGCGS+ GG C SG GGC C S G SS
Sbjct: 2 GCCGCSRGCGSGCGGCGSSCGG-CGSGCGGCGSGR-------------GGCGSGCGGCSS 47
Query: 101 CCGG-GSSQHSGGCC 114
CGG GS + CC
Sbjct: 48 SCGGCGSRCYVPVCC 62
Score = 37.7 bits (86), Expect = 0.002
Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 12/72 (16%)
Query: 2 SCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSGGGCGSNSG 61
SC SQ C P C+ C C C C SSCC CC SS C
Sbjct: 110 SCGCSQSSCCKPCCCSSGCGSSCCQSSCCKPCCCQSSCCVPV---CCQSSCCKPC----- 161
Query: 62 GCCSSGGGGCCL 73
CC S CC+
Sbjct: 162 -CCQS---NCCV 169
>gi|123173777 keratin associated protein 5-8 [Homo sapiens]
Length = 187
Score = 55.5 bits (132), Expect = 9e-09
Identities = 41/112 (36%), Positives = 42/112 (37%), Gaps = 26/112 (23%)
Query: 2 SCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPPVSSC---CSVSSG---GCCGSSSGGG 55
SC SQ C P C+ C C C C SSC CS SSG CC SS
Sbjct: 82 SCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPCCSQSSCCKPCSCSSGCGSSCCQSSCCKP 141
Query: 56 CGSNSG----GCCSSG-GGGCCLSHHRRHRSHRRRPQSSDCCSQPSGGSSCC 102
C S S CCSSG G CC S CC SSCC
Sbjct: 142 CCSQSSCCKPCCCSSGCGSSCC---------------QSSCCKPCCSQSSCC 178
Score = 51.2 bits (121), Expect = 2e-07
Identities = 38/101 (37%), Positives = 40/101 (39%), Gaps = 25/101 (24%)
Query: 20 CTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSG-GGCGSNSGGCCSSGG--GGCCLSHH 76
C P C C P C V +C S G C GS G G CG + G C S GG GGC
Sbjct: 29 CVPICC---CKPVCCCVPACSCSSCGSCGGSKGGRGSCGGSKGDCGSCGGSKGGC----- 80
Query: 77 RRHRSHRRRPQSSDCCSQPSGGSSCC---GGGSSQHSGGCC 114
S CSQ S CC G GSS CC
Sbjct: 81 -----------GSCGCSQCSCYKPCCCSSGCGSSCCQSSCC 110
Score = 43.9 bits (102), Expect = 3e-05
Identities = 29/73 (39%), Positives = 32/73 (43%), Gaps = 16/73 (21%)
Query: 46 GCCGSSSGGGCGSNSGGC---CSSGGGGCCLSHHRRHRSHRRRPQSSDCCSQPSGGSSCC 102
GCCG S GGCGS GGC C G CC+ +P CC P+ S C
Sbjct: 2 GCCGCS--GGCGSGCGGCGSGCGGCGSSCCVP------ICCCKPV---CCCVPACSCSSC 50
Query: 103 G--GGSSQHSGGC 113
G GGS G C
Sbjct: 51 GSCGGSKGGRGSC 63
>gi|5174693 small proline-rich protein 2A [Homo sapiens]
Length = 72
Score = 55.1 bits (131), Expect = 1e-08
Identities = 22/33 (66%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 4 QQSQQQCQPPPKC-TPKCTPKCPAPKCPPKCPP 35
QQ +Q CQPPP C TPKC CP PKCP CPP
Sbjct: 6 QQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPP 38
>gi|62955831 small proline-rich protein 2B [Homo sapiens]
Length = 72
Score = 55.1 bits (131), Expect = 1e-08
Identities = 22/33 (66%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 4 QQSQQQCQPPPKC-TPKCTPKCPAPKCPPKCPP 35
QQ +Q CQPPP C TPKC CP PKCP CPP
Sbjct: 6 QQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPP 38
Score = 25.8 bits (55), Expect = 7.8
Identities = 10/21 (47%), Positives = 10/21 (47%)
Query: 3 CQQSQQQCQPPPKCTPKCTPK 23
CQQ P P C PK PK
Sbjct: 50 CQQKYPPVTPSPPCQPKYPPK 70
>gi|83582817 small proline-rich protein 2E [Homo sapiens]
Length = 72
Score = 55.1 bits (131), Expect = 1e-08
Identities = 22/33 (66%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 4 QQSQQQCQPPPKC-TPKCTPKCPAPKCPPKCPP 35
QQ +Q CQPPP C TPKC CP PKCP CPP
Sbjct: 6 QQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPP 38
Score = 30.0 bits (66), Expect = 0.41
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Query: 4 QQSQQQCQP---PPKCTPKCTPK 23
QQ QQ+C P P C PKC PK
Sbjct: 48 QQCQQKCPPVTPSPPCQPKCPPK 70
>gi|60279697 keratin associated protein 5-7 [Homo sapiens]
Length = 165
Score = 54.3 bits (129), Expect = 2e-08
Identities = 39/101 (38%), Positives = 41/101 (40%), Gaps = 25/101 (24%)
Query: 20 CTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSG-GGCGSNSGGCCSSGG--GGCCLSHH 76
C P C C P C V +C S G C GS G G CG + GGC S GG GGC
Sbjct: 36 CVPVCC---CKPVCCCVPACSCSSCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGC----- 87
Query: 77 RRHRSHRRRPQSSDCCSQPSGGSSCC---GGGSSQHSGGCC 114
S CSQ S CC G GSS CC
Sbjct: 88 -----------GSCGCSQCSCYKPCCCSSGCGSSCCQSSCC 117
Score = 47.4 bits (111), Expect = 2e-06
Identities = 36/101 (35%), Positives = 39/101 (38%), Gaps = 33/101 (32%)
Query: 2 SCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSGGGCGSNSG 61
SC SQ C P C+ C C C C SSCC CC SS GCGS+
Sbjct: 89 SCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPCCCQSSCCK----PCCCSS---GCGSS-- 139
Query: 62 GCCSSGGGGCCLSHHRRHRSHRRRPQSSDCCSQPSGGSSCC 102
CC S CC + CCSQ SSCC
Sbjct: 140 -CCQS---SCC----------------NPCCSQ----SSCC 156
Score = 45.1 bits (105), Expect = 1e-05
Identities = 30/81 (37%), Positives = 32/81 (39%), Gaps = 25/81 (30%)
Query: 46 GCCGSSSG-----GGCGSNSGGC---CSSGGGGCCLSHHRRHRSHRRRPQ---SSDCCSQ 94
GCCG S G GGCGS GGC C G CC+ P CC
Sbjct: 2 GCCGCSEGCGSGCGGCGSGCGGCGSGCGGCGSSCCV------------PVCCCKPVCCCV 49
Query: 95 PSGGSSCCG--GGSSQHSGGC 113
P+ S CG GGS G C
Sbjct: 50 PACSCSSCGSCGGSKGGCGSC 70
>gi|62945419 small proline-rich protein 2F [Homo sapiens]
Length = 72
Score = 53.5 bits (127), Expect = 3e-08
Identities = 23/37 (62%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 4 QQSQQQCQPPPKC-TPKCTPKCPAPKCPPKCPPVSSC 39
QQ +Q CQPPP C PKC CP PKCP CPP S C
Sbjct: 6 QQCKQPCQPPPVCPAPKCPEPCPPPKCPEPCPP-SKC 41
Score = 30.0 bits (66), Expect = 0.41
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Query: 4 QQSQQQCQP---PPKCTPKCTPK 23
QQ QQ+C P P C PKC PK
Sbjct: 48 QQCQQKCPPVTPSPPCQPKCPPK 70
>gi|123702038 keratin associated protein 5-9 [Homo sapiens]
Length = 169
Score = 53.5 bits (127), Expect = 3e-08
Identities = 42/141 (29%), Positives = 44/141 (31%), Gaps = 31/141 (21%)
Query: 2 SCQQSQQQCQPPPKCTPKCTPKCPAPK-CPPKCPPVSSCCSVSSGGCCGSSSGGGCGSNS 60
SC C C P C AP C C PV C S CG G CG +
Sbjct: 13 SCGGCDSSCGSCGSGCRGCGPSCCAPVYC---CKPVCCCVPACSCSSCGKRGCGSCGGSK 69
Query: 61 GG---------------CCSSGGGGCCLSHHRRHRSHRRRPQSSDCCSQPSGGSSCC--- 102
GG CCSSG G C + CCS GSSCC
Sbjct: 70 GGCGSCGCSQCSCCKPCCCSSGCGSSCCQCSCCKPYCSQCSCCKPCCSSSGRGSSCCQSS 129
Query: 103 ---------GGGSSQHSGGCC 114
G GSS CC
Sbjct: 130 CCKPCCSSSGCGSSCCQSSCC 150
Score = 41.2 bits (95), Expect = 2e-04
Identities = 30/81 (37%), Positives = 35/81 (43%), Gaps = 23/81 (28%)
Query: 46 GCCGSSSGGGCGSNSGGC---CSSGGGGC------CLSHHRRHRSHRRRPQSSDCCSQPS 96
GCCG S GGCGS+ GGC C S G GC C + + +P CC P+
Sbjct: 2 GCCGCS--GGCGSSCGGCDSSCGSCGSGCRGCGPSCCA-----PVYCCKPV---CCCVPA 51
Query: 97 GGSSCCG----GGSSQHSGGC 113
S CG G GGC
Sbjct: 52 CSCSSCGKRGCGSCGGSKGGC 72
>gi|60593038 keratin associated protein 5-4 [Homo sapiens]
Length = 288
Score = 53.1 bits (126), Expect = 5e-08
Identities = 35/97 (36%), Positives = 37/97 (38%), Gaps = 28/97 (28%)
Query: 20 CTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSG-GGCGSNSGGCCSSGG--GGCCLSHH 76
C P C C P C V +C S G C GS G G CG + GGC S GG GGC
Sbjct: 50 CVPICC---CKPVCCCVPACSCSSCGSCGGSKGGYGSCGGSKGGCVSCGGSKGGC----- 101
Query: 77 RRHRSHRRRPQSSDCCSQPSGGSSCCGGGSSQHSGGC 113
C GG CGG GGC
Sbjct: 102 -------------GSCGGSKGGCGSCGGS----KGGC 121
Score = 46.6 bits (109), Expect = 4e-06
Identities = 41/131 (31%), Positives = 43/131 (32%), Gaps = 36/131 (27%)
Query: 10 CQPPPKCTPKCTPKCPAPKCPPKCPPVSSC---------CSVSSGGCC------------ 48
C P C P C C P C C SC C S GGC
Sbjct: 50 CVPICCCKPVC---CCVPAC--SCSSCGSCGGSKGGYGSCGGSKGGCVSCGGSKGGCGSC 104
Query: 49 -GSSSG-GGCGSNSGGCCSSGG--GGCCLSHHRRHRSHRRRPQSSDC--CSQPSGGSSCC 102
GS G G CG + GGC S GG GGC + C C GG C
Sbjct: 105 GGSKGGCGSCGGSKGGCGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCVSCGGSKGGCGSC 164
Query: 103 GGGSSQHSGGC 113
GG GGC
Sbjct: 165 GGS----KGGC 171
Score = 46.2 bits (108), Expect = 6e-06
Identities = 35/95 (36%), Positives = 36/95 (37%), Gaps = 33/95 (34%)
Query: 39 CCSVSSG---GCCGSSSG-GGCGSNSGGC------CSSGGGGC--------CLSHHRRHR 80
CC S G GC G SG GGCGS GGC C SG GGC C
Sbjct: 3 CCGCSGGCGSGCGGCGSGCGGCGSGCGGCGSGCGGCGSGCGGCGSSCCVPICCC------ 56
Query: 81 SHRRRPQSSDCCSQPSGGSSCCG--GGSSQHSGGC 113
CC P+ S CG GGS G C
Sbjct: 57 -------KPVCCCVPACSCSSCGSCGGSKGGYGSC 84
Score = 46.2 bits (108), Expect = 6e-06
Identities = 32/82 (39%), Positives = 33/82 (40%), Gaps = 12/82 (14%)
Query: 40 CSVSSGGC--CGSSSGG--GCGSNSGGCCSSGG--GGC--CLSHHRRHRSHRRRPQSSDC 91
C S GGC CG S GG CG + GGC S GG GGC C S
Sbjct: 104 CGGSKGGCGSCGGSKGGCGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCVSCGGSKGGCGS 163
Query: 92 CSQPSGGSSCCGGGSSQHSGGC 113
C GG CGG GGC
Sbjct: 164 CGGSKGGCGSCGGS----KGGC 181
Score = 45.4 bits (106), Expect = 9e-06
Identities = 31/83 (37%), Positives = 32/83 (38%), Gaps = 31/83 (37%)
Query: 40 CSVSSGGC--CGSSSGG--GCGSNSGGC---------------CSSG-GGGCCLSHHRRH 79
C S GGC CG S GG CG + GGC CSSG G CC S
Sbjct: 164 CGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQS----- 218
Query: 80 RSHRRRPQSSDCCSQPSGGSSCC 102
CCS GSSCC
Sbjct: 219 ------SCCKPCCSSSGCGSSCC 235
Score = 43.5 bits (101), Expect = 4e-05
Identities = 36/110 (32%), Positives = 38/110 (34%), Gaps = 32/110 (29%)
Query: 2 SCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSGGGC----- 56
SC SQ C P C+ C C C C P CC SS GC S C
Sbjct: 193 SCGCSQCSCCKPCCCSSGCGSSCCQSSC---CKP---CC--SSSGCGSSCCQSSCCKPYC 244
Query: 57 --GSNSGGCCSSGGGG--CCLSHHRRHRSHRRRPQSSDCCSQPSGGSSCC 102
S CCSS G G CC S CC+ SSCC
Sbjct: 245 CQSSCCKPCCSSSGCGSSCC---------------QSSCCNPCCSQSSCC 279
Score = 43.1 bits (100), Expect = 5e-05
Identities = 35/85 (41%), Positives = 36/85 (42%), Gaps = 27/85 (31%)
Query: 40 CSVSSGGC--CGSSSGGGCGS---NSGGCCSSGG--GGCCLSHHRRHRSHRRRPQSSDCC 92
C S GGC CG S GG CGS + GGC S GG GGC S C
Sbjct: 154 CGGSKGGCGSCGGSKGG-CGSCGGSKGGCGSCGGSKGGC----------------GSCGC 196
Query: 93 SQPSGGSSCC---GGGSSQHSGGCC 114
SQ S CC G GSS CC
Sbjct: 197 SQCSCCKPCCCSSGCGSSCCQSSCC 221
Score = 42.0 bits (97), Expect = 1e-04
Identities = 38/98 (38%), Positives = 39/98 (39%), Gaps = 24/98 (24%)
Query: 40 CSVSSGGC--CGSSSGGGCGS---NSGGCCSSGG--GGC--CLSHHRRHRSHRRRPQS-- 88
C S GGC CG S GG CGS + GGC S GG GGC C S S
Sbjct: 144 CGGSKGGCVSCGGSKGG-CGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCC 202
Query: 89 SDCCSQPSGGSSCC------------GGGSSQHSGGCC 114
CC GSSCC G GSS CC
Sbjct: 203 KPCCCSSGCGSSCCQSSCCKPCCSSSGCGSSCCQSSCC 240
>gi|60593040 keratin associated protein 5-10 [Homo sapiens]
Length = 202
Score = 52.8 bits (125), Expect = 6e-08
Identities = 39/100 (39%), Positives = 41/100 (41%), Gaps = 14/100 (14%)
Query: 20 CTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSG--GGCGSNSGGCCSSGG--GGC--CL 73
C P C C P C V + CS SS G CG S G G CG + GGC S GG GGC C
Sbjct: 43 CVPVCC---CKPVCCCVPA-CSCSSCGSCGGSKGDCGSCGGSKGGCGSCGGSKGGCGSCG 98
Query: 74 SHHRRHRSHRRRPQSSDCCSQPSGGSSCCGGGSSQHSGGC 113
S C GG CGG GGC
Sbjct: 99 GSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGS----KGGC 134
Score = 45.8 bits (107), Expect = 7e-06
Identities = 33/94 (35%), Positives = 35/94 (37%), Gaps = 36/94 (38%)
Query: 40 CSVSSGGC--CGSSSGG--GCGSNSGGC---------------CSSGGGGCCLSHHRRHR 80
C S GGC CG S GG CG + GGC CSSG G CC
Sbjct: 107 CGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCNCCKPCCCSSGCGSCC-------- 158
Query: 81 SHRRRPQSSDCCSQPSGGSSCCGGGSSQHSGGCC 114
S CC+ SSCC Q S CC
Sbjct: 159 -------QSSCCNPCCCQSSCCVPVCCQSS--CC 183
Score = 42.7 bits (99), Expect = 6e-05
Identities = 30/88 (34%), Positives = 32/88 (36%), Gaps = 32/88 (36%)
Query: 46 GCCGSSSG-----GGCGSNSGGC----------CSSGGGGCCLSHHRRHRSHRRRPQ--- 87
GCCG S G GGCGS GGC C G CC+ P
Sbjct: 2 GCCGCSGGCGSGCGGCGSGCGGCGSGCGGYGSGCGGCGSSCCV------------PVCCC 49
Query: 88 SSDCCSQPSGGSSCCG--GGSSQHSGGC 113
CC P+ S CG GGS G C
Sbjct: 50 KPVCCCVPACSCSSCGSCGGSKGDCGSC 77
Score = 39.3 bits (90), Expect = 7e-04
Identities = 30/83 (36%), Positives = 33/83 (39%), Gaps = 15/83 (18%)
Query: 39 CCSVSSG---GCCGSSSG-GGCGSNSGGC---CSSGGGGCCLSHHRRHRSHRRRPQSSDC 91
CC S G GC G SG GGCGS GG C G CC+ +P C
Sbjct: 3 CCGCSGGCGSGCGGCGSGCGGCGSGCGGYGSGCGGCGSSCCVP------VCCCKPVC--C 54
Query: 92 CSQPSGGSSCCGGGSSQHSGGCC 114
C SSC G S+ G C
Sbjct: 55 CVPACSCSSCGSCGGSKGDCGSC 77
Score = 36.6 bits (83), Expect = 0.004
Identities = 25/72 (34%), Positives = 28/72 (38%), Gaps = 13/72 (18%)
Query: 2 SCQQSQQQCQPPPKCTPKCTPKCPAPKCPPKCPPVSSCCSVSSGGCCGSSSGGGCGSNSG 61
SC SQ C P C+ C C + C P C S C V CC SS C
Sbjct: 136 SCGCSQCNCCKPCCCSSGCGSCCQSSCCNPCCCQSSCCVPV----CCQSSCCKPC----- 186
Query: 62 GCCSSGGGGCCL 73
CC S CC+
Sbjct: 187 -CCQS---SCCV 194
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.501
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,853,266
Number of Sequences: 37866
Number of extensions: 518841
Number of successful extensions: 10386
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 418
Number of HSP's that attempted gapping in prelim test: 4331
Number of HSP's gapped (non-prelim): 3425
length of query: 114
length of database: 18,247,518
effective HSP length: 84
effective length of query: 30
effective length of database: 15,066,774
effective search space: 452003220
effective search space used: 452003220
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.