Guide to the Human Genome
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Name: IL1RL1 Sequence: fasta or formatted (328aa) NCBI GI: 27894328
Description:

interleukin 1 receptor-like 1 isoform 2 precursor

Referenced in:

Interleukins and Their Receptors

Other entries for this name:
alt prot [556aa] interleukin 1 receptor-like 1 isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         24           2
 C cysteine            3.4         11           1
 D aspartate           4.3         14           1
 E glutamate           5.2         17           2
 F phenylalanine       4.9         16           1
 G glycine             6.1         20           1
 H histidine           1.2          4           1
 I isoleucine          5.5         18           1
 K lysine              6.1         20           2
 L leucine             8.8         29           3
 M methionine          1.5          5           1
 N asparagine          6.4         21           1
 P proline             3.7         12           1
 Q glutamine           5.2         17           2
 R arginine            4.6         15           2
 S serine              7.3         24           1
 T threonine           6.7         22           1
 V valine              5.5         18           1
 W tryptophan          1.8          6           1
 Y tyrosine            4.6         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 1 receptor-like 1 isoform 2 precursor [H... 
IL1RL1                0.983   interleukin 1 receptor-like 1 isoform 1 precursor [H...
IL1R2                 0.106   interleukin 1 receptor, type II precursor 
IL1R2                 0.106   interleukin 1 receptor, type II precursor 
IL1R1                 0.104   interleukin 1 receptor, type I precursor 
IL1RL2                0.091   interleukin 1 receptor-like 2 precursor 
IL1RAP                0.088   interleukin 1 receptor accessory protein isoform 1 [H...
IL1RAP                0.084   interleukin 1 receptor accessory protein isoform 2 [...
IL1RAPL2              0.081   interleukin 1 receptor accessory protein-like 2 [Hom...
IL1RAPL1              0.078   interleukin 1 receptor accessory protein-like 1 precu...
IL18R1                0.071   interleukin 18 receptor 1 precursor 
FGFR1                 0.060   fibroblast growth factor receptor 1 isoform 2 precur...
FGFR1                 0.058   fibroblast growth factor receptor 1 isoform 9 precur...
FGFR1                 0.058   fibroblast growth factor receptor 1 isoform 1 precu...
IL18RAP               0.045   interleukin 18 receptor accessory protein precursor [...
HMCN2                 0.045   PREDICTED: hemicentin 2 
HMCN2                 0.045   PREDICTED: hemicentin 2 
HMCN2                 0.045   PREDICTED: hemicentin 2 
HMCN1                 0.038   hemicentin 1 
FGFR1                 0.035   fibroblast growth factor receptor 1 isoform 4 precur...
FGFR1                 0.035   fibroblast growth factor receptor 1 isoform 3 precur...
HSPG2                 0.034   heparan sulfate proteoglycan 2 
DCC                   0.032   deleted in colorectal carcinoma 
CEACAM1               0.032   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.032   carcinoembryonic antigen-related cell adhesion molec...
CNTN2                 0.031   contactin 2 precursor 
TTN                   0.029   titin isoform N2-A 
NRCAM                 0.029   neuronal cell adhesion molecule isoform A precursor ...
MXRA5                 0.029   adlican 
CNTN1                 0.029   contactin 1 isoform 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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