Guide to the Human Genome
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Name: IL18RAP Sequence: fasta or formatted (599aa) NCBI GI: 4504657
Description:

interleukin 18 receptor accessory protein precursor

Referenced in:

Interleukins and Their Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         24           2
 C cysteine            2.7         16           2
 D aspartate           5.0         30           2
 E glutamate           5.7         34           3
 F phenylalanine       3.8         23           1
 G glycine             4.8         29           2
 H histidine           1.8         11           1
 I isoleucine          6.0         36           2
 K lysine              7.0         42           2
 L leucine            10.7         64           3
 M methionine          1.0          6           1
 N asparagine          3.3         20           2
 P proline             5.2         31           2
 Q glutamine           4.3         26           2
 R arginine            5.2         31           2
 S serine              9.7         58           2
 T threonine           5.5         33           2
 V valine              7.8         47           2
 W tryptophan          2.5         15           1
 Y tyrosine            3.8         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 18 receptor accessory protein precursor [... 
IL1RAPL2              0.158   interleukin 1 receptor accessory protein-like 2 [Hom...
IL1RAPL1              0.141   interleukin 1 receptor accessory protein-like 1 precu...
IL1RAP                0.130   interleukin 1 receptor accessory protein isoform 1 [H...
IL18R1                0.121   interleukin 18 receptor 1 precursor 
IL1RL1                0.100   interleukin 1 receptor-like 1 isoform 1 precursor [H...
IL1R1                 0.093   interleukin 1 receptor, type I precursor 
IL1RL2                0.079   interleukin 1 receptor-like 2 precursor 
IL1R2                 0.044   interleukin 1 receptor, type II precursor 
IL1R2                 0.044   interleukin 1 receptor, type II precursor 
SIGIRR                0.036   single Ig IL-1R-related molecule 
SIGIRR                0.036   single Ig IL-1R-related molecule 
SIGIRR                0.036   single Ig IL-1R-related molecule 
IL1RAP                0.036   interleukin 1 receptor accessory protein isoform 2 [...
IL1RL1                0.024   interleukin 1 receptor-like 1 isoform 2 precursor [H...
TLR1                  0.023   toll-like receptor 1 
TLR6                  0.022   toll-like receptor 6 
TLR10                 0.017   toll-like receptor 10 precursor 
TLR10                 0.017   toll-like receptor 10 precursor 
PXDNL                 0.016   peroxidasin homolog-like 
TLR2                  0.015   toll-like receptor 2 
HMCN2                 0.015   PREDICTED: hemicentin 2 
HMCN2                 0.015   PREDICTED: hemicentin 2 
HMCN2                 0.015   PREDICTED: hemicentin 2 
IGSF9B                0.013   immunoglobulin superfamily, member 9B 
TLR8                  0.012   toll-like receptor 8 
TLR3                  0.011   toll-like receptor 3 
HMCN1                 0.011   hemicentin 1 
NCAM1                 0.011   neural cell adhesion molecule 1 isoform 1 
NCAM1                 0.011   neural cell adhesion molecule 1 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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