Guide to the Human Genome
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Name: IL1RAP Sequence: fasta or formatted (356aa) NCBI GI: 19882209
Description:

interleukin 1 receptor accessory protein isoform 2

Referenced in:

Interleukins and Their Receptors

Other entries for this name:
alt prot [570aa] interleukin 1 receptor accessory protein isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4         12           2
 C cysteine            3.4         12           1
 D aspartate           5.3         19           2
 E glutamate           6.2         22           2
 F phenylalanine       4.2         15           1
 G glycine             4.5         16           1
 H histidine           2.2          8           1
 I isoleucine          6.5         23           1
 K lysine              6.5         23           2
 L leucine             7.9         28           2
 M methionine          2.0          7           1
 N asparagine          5.9         21           2
 P proline             5.6         20           2
 Q glutamine           2.8         10           1
 R arginine            5.1         18           1
 S serine              6.7         24           2
 T threonine           7.6         27           2
 V valine              7.6         27           2
 W tryptophan          2.2          8           2
 Y tyrosine            4.5         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 1 receptor accessory protein isoform 2 [... 
IL1RAP                0.981   interleukin 1 receptor accessory protein isoform 1 [H...
IL1RAPL2              0.187   interleukin 1 receptor accessory protein-like 2 [Hom...
IL1RAPL1              0.179   interleukin 1 receptor accessory protein-like 1 precu...
IL1R2                 0.093   interleukin 1 receptor, type II precursor 
IL1R2                 0.093   interleukin 1 receptor, type II precursor 
IL1R1                 0.080   interleukin 1 receptor, type I precursor 
IL1RL1                0.076   interleukin 1 receptor-like 1 isoform 2 precursor [H...
IL1RL1                0.076   interleukin 1 receptor-like 1 isoform 1 precursor [H...
IL18R1                0.062   interleukin 18 receptor 1 precursor 
IL18RAP               0.060   interleukin 18 receptor accessory protein precursor [...
IL1RL2                0.057   interleukin 1 receptor-like 2 precursor 
IGSF9B                0.025   immunoglobulin superfamily, member 9B 
HMCN1                 0.024   hemicentin 1 
TTN                   0.021   titin isoform N2-A 
CNTN4                 0.021   contactin 4 isoform c precursor 
CNTN4                 0.021   contactin 4 isoform a precursor 
HMCN2                 0.019   PREDICTED: hemicentin 2 
HMCN2                 0.019   PREDICTED: hemicentin 2 
HMCN2                 0.019   PREDICTED: hemicentin 2 
ROBO2                 0.019   roundabout, axon guidance receptor, homolog 2 isofo...
ROBO2                 0.019   roundabout, axon guidance receptor, homolog 2 isofor...
CEACAM18              0.014   carcinoembryonic antigen-related cell adhesion mole...
CEACAM5               0.014   carcinoembryonic antigen-related cell adhesion molec...
CNTN3                 0.014   contactin 3 
CNTN6                 0.014   contactin 6 
DSCAM                 0.012   Down syndrome cell adhesion molecule isoform CHD2-42...
UNC5D                 0.012   unc-5 homolog D 
KDR                   0.011   kinase insert domain receptor precursor 
SDK1                  0.011   sidekick 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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