Guide to the Human Genome
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Name: IL18R1 Sequence: fasta or formatted (541aa) NCBI GI: 4504655
Description:

interleukin 18 receptor 1 precursor

Referenced in:

Interleukins and Their Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3         18           1
 C cysteine            2.8         15           1
 D aspartate           3.3         18           1
 E glutamate           8.7         47           2
 F phenylalanine       4.3         23           2
 G glycine             4.1         22           2
 H histidine           3.5         19           2
 I isoleucine          6.1         33           2
 K lysine              7.6         41           2
 L leucine            10.7         58           3
 M methionine          1.7          9           1
 N asparagine          5.7         31           2
 P proline             3.7         20           1
 Q glutamine           1.5          8           1
 R arginine            5.0         27           2
 S serine              7.6         41           3
 T threonine           6.3         34           3
 V valine              9.1         49           2
 W tryptophan          1.5          8           1
 Y tyrosine            3.7         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 18 receptor 1 precursor 
IL1RAPL1              0.167   interleukin 1 receptor accessory protein-like 1 precu...
IL1RAPL2              0.166   interleukin 1 receptor accessory protein-like 2 [Hom...
IL1RAP                0.157   interleukin 1 receptor accessory protein isoform 1 [H...
IL1R1                 0.153   interleukin 1 receptor, type I precursor 
IL1RL1                0.137   interleukin 1 receptor-like 1 isoform 1 precursor [H...
IL18RAP               0.135   interleukin 18 receptor accessory protein precursor [...
IL1RL2                0.129   interleukin 1 receptor-like 2 precursor 
SIGIRR                0.050   single Ig IL-1R-related molecule 
SIGIRR                0.050   single Ig IL-1R-related molecule 
SIGIRR                0.050   single Ig IL-1R-related molecule 
IL1RL1                0.043   interleukin 1 receptor-like 1 isoform 2 precursor [H...
IL1RAP                0.042   interleukin 1 receptor accessory protein isoform 2 [...
TLR1                  0.040   toll-like receptor 1 
TLR2                  0.035   toll-like receptor 2 
TLR6                  0.033   toll-like receptor 6 
TLR10                 0.030   toll-like receptor 10 precursor 
TLR10                 0.030   toll-like receptor 10 precursor 
TLR4                  0.026   toll-like receptor 4 precursor 
IL1R2                 0.025   interleukin 1 receptor, type II precursor 
IL1R2                 0.025   interleukin 1 receptor, type II precursor 
TLR7                  0.022   toll-like receptor 7 
MYD88                 0.020   myeloid differentiation primary response gene 88 [H...
LRIG1                 0.020   leucine-rich repeats and immunoglobulin-like domains...
TLR8                  0.015   toll-like receptor 8 
TLR3                  0.015   toll-like receptor 3 
LRIG2                 0.013   leucine-rich repeats and immunoglobulin-like domains ...
CD226                 0.013   CD226 molecule precursor 
FGFR1                 0.011   fibroblast growth factor receptor 1 isoform 9 precur...
FGFR1                 0.011   fibroblast growth factor receptor 1 isoform 4 precur...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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