Guide to the Human Genome
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Name: IL1RAP Sequence: fasta or formatted (570aa) NCBI GI: 4504661
Description:

interleukin 1 receptor accessory protein isoform 1

Referenced in:

Interleukins and Their Receptors

Other entries for this name:
alt prot [356aa] interleukin 1 receptor accessory protein isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         24           2
 C cysteine            2.3         13           1
 D aspartate           4.6         26           2
 E glutamate           6.8         39           4
 F phenylalanine       4.0         23           1
 G glycine             4.9         28           2
 H histidine           1.8         10           1
 I isoleucine          5.8         33           1
 K lysine              7.2         41           2
 L leucine             9.8         56           2
 M methionine          1.8         10           1
 N asparagine          4.7         27           2
 P proline             4.7         27           2
 Q glutamine           3.0         17           1
 R arginine            5.1         29           2
 S serine              6.7         38           3
 T threonine           6.7         38           2
 V valine              9.1         52           2
 W tryptophan          1.9         11           2
 Y tyrosine            4.9         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 1 receptor accessory protein isoform 1 [H... 
IL1RAP                0.622   interleukin 1 receptor accessory protein isoform 2 [...
IL1RAPL2              0.265   interleukin 1 receptor accessory protein-like 2 [Hom...
IL1RAPL1              0.244   interleukin 1 receptor accessory protein-like 1 precu...
IL18R1                0.149   interleukin 18 receptor 1 precursor 
IL18RAP               0.137   interleukin 18 receptor accessory protein precursor [...
IL1RL1                0.127   interleukin 1 receptor-like 1 isoform 1 precursor [H...
IL1RL2                0.115   interleukin 1 receptor-like 2 precursor 
IL1R1                 0.112   interleukin 1 receptor, type I precursor 
IL1R2                 0.059   interleukin 1 receptor, type II precursor 
IL1R2                 0.059   interleukin 1 receptor, type II precursor 
SIGIRR                0.053   single Ig IL-1R-related molecule 
SIGIRR                0.053   single Ig IL-1R-related molecule 
SIGIRR                0.053   single Ig IL-1R-related molecule 
IL1RL1                0.050   interleukin 1 receptor-like 1 isoform 2 precursor [H...
TLR6                  0.039   toll-like receptor 6 
TLR1                  0.033   toll-like receptor 1 
TLR4                  0.025   toll-like receptor 4 precursor 
TLR10                 0.024   toll-like receptor 10 precursor 
TLR10                 0.024   toll-like receptor 10 precursor 
MYD88                 0.022   myeloid differentiation primary response gene 88 [H...
TLR7                  0.022   toll-like receptor 7 
TLR2                  0.020   toll-like receptor 2 
TLR9                  0.018   toll-like receptor 9 isoform A precursor 
HMCN1                 0.017   hemicentin 1 
IGSF9B                0.016   immunoglobulin superfamily, member 9B 
TTN                   0.016   titin isoform N2-A 
TLR8                  0.015   toll-like receptor 8 
CNTN4                 0.013   contactin 4 isoform c precursor 
CNTN4                 0.013   contactin 4 isoform a precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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