Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: IL1R1 Sequence: fasta or formatted (569aa) NCBI GI: 4504659
Description:

interleukin 1 receptor, type I precursor

Referenced in:

Interleukins and Their Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         25           2
 C cysteine            2.8         16           1
 D aspartate           5.1         29           2
 E glutamate           7.0         40           2
 F phenylalanine       3.9         22           2
 G glycine             4.9         28           2
 H histidine           2.5         14           1
 I isoleucine          8.8         50           3
 K lysine              8.4         48           2
 L leucine             8.1         46           3
 M methionine          1.4          8           1
 N asparagine          4.6         26           2
 P proline             4.7         27           1
 Q glutamine           3.7         21           1
 R arginine            4.2         24           2
 S serine              6.7         38           2
 T threonine           4.4         25           1
 V valine              7.7         44           2
 W tryptophan          1.6          9           1
 Y tyrosine            5.1         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 1 receptor, type I precursor 
IL1RL2                0.315   interleukin 1 receptor-like 2 precursor 
IL1RL1                0.174   interleukin 1 receptor-like 1 isoform 1 precursor [H...
IL1RAPL2              0.164   interleukin 1 receptor accessory protein-like 2 [Hom...
IL1RAPL1              0.148   interleukin 1 receptor accessory protein-like 1 precu...
IL18R1                0.144   interleukin 18 receptor 1 precursor 
IL1RAP                0.112   interleukin 1 receptor accessory protein isoform 1 [H...
IL18RAP               0.097   interleukin 18 receptor accessory protein precursor [...
IL1R2                 0.087   interleukin 1 receptor, type II precursor 
IL1R2                 0.087   interleukin 1 receptor, type II precursor 
IL1RL1                0.060   interleukin 1 receptor-like 1 isoform 2 precursor [H...
IL1RAP                0.051   interleukin 1 receptor accessory protein isoform 2 [...
SIGIRR                0.039   single Ig IL-1R-related molecule 
SIGIRR                0.039   single Ig IL-1R-related molecule 
SIGIRR                0.039   single Ig IL-1R-related molecule 
HMCN1                 0.030   hemicentin 1 
TTN                   0.025   titin isoform N2-A 
ROBO3                 0.025   roundabout, axon guidance receptor, homolog 3 
NRCAM                 0.025   neuronal cell adhesion molecule isoform A precursor ...
NRCAM                 0.025   neuronal cell adhesion molecule isoform B precursor ...
FGFR4                 0.024   fibroblast growth factor receptor 4 isoform 2 precur...
FGFR4                 0.024   fibroblast growth factor receptor 4 isoform 1 precur...
FGFR4                 0.024   fibroblast growth factor receptor 4 isoform 1 precur...
LRIG1                 0.024   leucine-rich repeats and immunoglobulin-like domains...
IGSF10                0.022   immunoglobulin superfamily, member 10 
NFASC                 0.021   neurofascin isoform 3 precursor 
NFASC                 0.021   neurofascin isoform 2 precursor 
NFASC                 0.021   neurofascin isoform 4 precursor 
NFASC                 0.021   neurofascin isoform 6 precursor 
NFASC                 0.021   neurofascin isoform 5 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press