Guide to the Human Genome
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Name: IL1RL1 Sequence: fasta or formatted (556aa) NCBI GI: 27894324
Description:

interleukin 1 receptor-like 1 isoform 1 precursor

Referenced in:

Interleukins and Their Receptors

Other entries for this name:
alt prot [328aa] interleukin 1 receptor-like 1 isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         41           2
 C cysteine            2.7         15           1
 D aspartate           4.7         26           1
 E glutamate           5.2         29           2
 F phenylalanine       3.8         21           1
 G glycine             4.7         26           1
 H histidine           2.5         14           2
 I isoleucine          7.0         39           2
 K lysine              6.5         36           2
 L leucine             9.5         53           3
 M methionine          2.2         12           1
 N asparagine          5.4         30           1
 P proline             3.8         21           1
 Q glutamine           5.0         28           2
 R arginine            4.9         27           2
 S serine              6.5         36           2
 T threonine           5.8         32           1
 V valine              6.3         35           2
 W tryptophan          1.8         10           1
 Y tyrosine            4.5         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 1 receptor-like 1 isoform 1 precursor [H... 
IL1RL1                0.577   interleukin 1 receptor-like 1 isoform 2 precursor [H...
IL1R1                 0.179   interleukin 1 receptor, type I precursor 
IL1RL2                0.163   interleukin 1 receptor-like 2 precursor 
IL1RAPL2              0.139   interleukin 1 receptor accessory protein-like 2 [Hom...
IL18R1                0.133   interleukin 18 receptor 1 precursor 
IL1RAP                0.131   interleukin 1 receptor accessory protein isoform 1 [H...
IL1RAPL1              0.124   interleukin 1 receptor accessory protein-like 1 precu...
IL18RAP               0.108   interleukin 18 receptor accessory protein precursor [...
IL1R2                 0.063   interleukin 1 receptor, type II precursor 
IL1R2                 0.063   interleukin 1 receptor, type II precursor 
IL1RAP                0.050   interleukin 1 receptor accessory protein isoform 2 [...
SIGIRR                0.041   single Ig IL-1R-related molecule 
SIGIRR                0.041   single Ig IL-1R-related molecule 
SIGIRR                0.041   single Ig IL-1R-related molecule 
FGFR1                 0.035   fibroblast growth factor receptor 1 isoform 2 precur...
FGFR1                 0.034   fibroblast growth factor receptor 1 isoform 9 precur...
FGFR1                 0.034   fibroblast growth factor receptor 1 isoform 1 precu...
TLR2                  0.027   toll-like receptor 2 
TLR4                  0.027   toll-like receptor 4 precursor 
HMCN2                 0.026   PREDICTED: hemicentin 2 
HMCN2                 0.026   PREDICTED: hemicentin 2 
HMCN2                 0.026   PREDICTED: hemicentin 2 
TLR1                  0.024   toll-like receptor 1 
HMCN1                 0.023   hemicentin 1 
FGFR1                 0.021   fibroblast growth factor receptor 1 isoform 4 precur...
FGFR1                 0.021   fibroblast growth factor receptor 1 isoform 3 precur...
HSPG2                 0.020   heparan sulfate proteoglycan 2 
DCC                   0.019   deleted in colorectal carcinoma 
TLR10                 0.019   toll-like receptor 10 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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