C8orf47 24472

Name: C8orf47	Sequence: fasta or formatted (374aa)		NCBI GI: 27734897
Description: hypothetical protein LOC203111		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.1 34 2 C cysteine 0.5 2 1 D aspartate 3.7 14 1 E glutamate 15.8 59 3 F phenylalanine 1.3 5 1 G glycine 8.8 33 2 H histidine 1.3 5 1 I isoleucine 2.4 9 1 K lysine 6.4 24 3 L leucine 6.7 25 2 M methionine 1.9 7 1 N asparagine 3.7 14 1 P proline 8.3 31 2 Q glutamine 7.0 26 2 R arginine 2.9 11 1 S serine 7.0 26 3 T threonine 6.7 25 2 V valine 6.1 23 2 W tryptophan 0.0 0 0 Y tyrosine 0.3 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC203111 RP1L1 0.053 retinitis pigmentosa 1-like 1 NASP 0.042 nuclear autoantigenic sperm protein isoform 2 NASP 0.042 nuclear autoantigenic sperm protein isoform 1 AKAP12 0.034 A kinase (PRKA) anchor protein 12 isoform 1 AKAP12 0.034 A kinase (PRKA) anchor protein 12 isoform 2 TCHHL1 0.032 trichohyalin-like 1 CLIC6 0.028 chloride intracellular channel 6 CHD2 0.028 chromodomain helicase DNA binding protein 2 isoform... CHD2 0.028 chromodomain helicase DNA binding protein 2 isoform... NEFM 0.025 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.025 neurofilament, medium polypeptide 150kDa isoform 2 ... NEFH 0.025 neurofilament, heavy polypeptide 200kDa PALM3 0.024 hypothetical protein LOC342979 RPGR 0.024 retinitis pigmentosa GTPase regulator isoform C [Hom... TXNDC2 0.024 thioredoxin domain-containing 2 isoform 1 TXNDC2 0.024 thioredoxin domain-containing 2 isoform 2 TXNDC2 0.024 thioredoxin domain-containing 2 isoform 1 FSCB 0.024 fibrous sheath CABYR binding protein CIC 0.024 capicua homolog CCDC96 0.024 coiled-coil domain containing 96 DPCR1 0.024 diffuse panbronchiolitis critical region 1 protein ... TCOF1 0.022 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.022 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.022 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.022 Treacher Collins-Franceschetti syndrome 1 isoform b ... TCOF1 0.022 Treacher Collins-Franceschetti syndrome 1 isoform a ... TCOF1 0.022 Treacher Collins-Franceschetti syndrome 1 isoform c ... ZFHX3 0.022 AT-binding transcription factor 1 GOLIM4 0.022 golgi integral membrane protein 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.