PALM3 14479

Name: PALM3	Sequence: fasta or formatted (673aa)		NCBI GI: 222537747
Description: hypothetical protein LOC342979		Referenced in: Synapses
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.9 60 3 C cysteine 0.9 6 2 D aspartate 2.7 18 1 E glutamate 18.7 126 4 F phenylalanine 0.4 3 1 G glycine 12.8 86 3 H histidine 0.6 4 1 I isoleucine 1.8 12 1 K lysine 4.9 33 2 L leucine 7.4 50 2 M methionine 1.0 7 1 N asparagine 1.0 7 1 P proline 8.6 58 2 Q glutamine 4.9 33 1 R arginine 6.7 45 2 S serine 7.0 47 2 T threonine 4.2 28 1 V valine 5.9 40 2 W tryptophan 1.2 8 1 Y tyrosine 0.3 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC342979 RP1L1 0.071 retinitis pigmentosa 1-like 1 RPGR 0.063 retinitis pigmentosa GTPase regulator isoform C [Hom... NEFH 0.039 neurofilament, heavy polypeptide 200kDa PALMD 0.037 palmdelphin PALM2 0.035 paralemmin 2 isoform b PALM2 0.035 paralemmin 2 isoform a PALM2-AKAP2 0.035 PALM2-AKAP2 protein isoform 2 PALM2-AKAP2 0.035 PALM2-AKAP2 protein isoform 1 PALM 0.034 paralemmin isoform 2 PALM 0.034 paralemmin isoform 1 APOB48R 0.033 apolipoprotein B48 receptor ARHGAP30 0.033 Rho GTPase activating protein 30 isoform 1 CLIC6 0.032 chloride intracellular channel 6 SMTNL1 0.030 smoothelin-like 1 SETD1A 0.030 SET domain containing 1A NEFM 0.030 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.030 neurofilament, medium polypeptide 150kDa isoform 2 ... KIAA1211 0.030 hypothetical protein LOC57482 OGFR 0.029 opioid growth factor receptor FSCB 0.028 fibrous sheath CABYR binding protein PELP1 0.027 proline, glutamic acid and leucine rich protein 1 [... NSBP1 0.025 nucleosomal binding protein 1 NES 0.025 nestin LOC100133599 0.025 PREDICTED: hypothetical protein SETD1B 0.024 SET domain containing 1B PNN 0.024 pinin, desmosome associated protein NCOR2 0.024 nuclear receptor co-repressor 2 isoform 1 MYT1 0.024 myelin transcription factor 1 NCOR2 0.023 nuclear receptor co-repressor 2 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.