Guide to the Human Genome
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Name: NASP Sequence: fasta or formatted (788aa) NCBI GI: 27262628
Description:

nuclear autoantigenic sperm protein isoform 2

Referenced in:

Histones, Related Proteins, and Modifying Enzymes
Testes and Sperm

Other entries for this name:
alt prot [449aa] nuclear autoantigenic sperm protein isoform 3
alt prot [790aa] nuclear autoantigenic sperm protein isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         79           2
 C cysteine            0.6          5           1
 D aspartate           5.3         42           2
 E glutamate          19.4        153           4
 F phenylalanine       1.0          8           3
 G glycine             7.2         57           4
 H histidine           0.8          6           1
 I isoleucine          2.4         19           2
 K lysine              7.9         62           2
 L leucine             6.6         52           2
 M methionine          1.6         13           1
 N asparagine          3.4         27           2
 P proline             4.2         33           2
 Q glutamine           4.6         36           1
 R arginine            2.3         18           1
 S serine              7.9         62           3
 T threonine           4.8         38           2
 V valine              8.2         65           2
 W tryptophan          0.3          2           1
 Y tyrosine            1.4         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear autoantigenic sperm protein isoform 2 
NASP                  0.957   nuclear autoantigenic sperm protein isoform 1 
NASP                  0.391   nuclear autoantigenic sperm protein isoform 3 
RPGR                  0.046   retinitis pigmentosa GTPase regulator isoform C [Hom...
NEFM                  0.046   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.046   neurofilament, medium polypeptide 150kDa isoform 2 ...
RP1L1                 0.045   retinitis pigmentosa 1-like 1 
CALD1                 0.033   caldesmon 1 isoform 1 
NEFH                  0.033   neurofilament, heavy polypeptide 200kDa 
EIF5B                 0.032   eukaryotic translation initiation factor 5B 
MAP1B                 0.031   microtubule-associated protein 1B 
LOC283685             0.031   PREDICTED: golgi autoantigen, golgin subfamily a-li...
CGN                   0.030   cingulin 
MYST4                 0.029   MYST histone acetyltransferase (monocytic leukemia)...
MYH9                  0.028   myosin, heavy polypeptide 9, non-muscle 
TRDN                  0.028   triadin 
MDN1                  0.027   MDN1, midasin homolog 
ATRX                  0.027   transcriptional regulator ATRX isoform 2 
ATRX                  0.027   transcriptional regulator ATRX isoform 1 
SETD1B                0.027   SET domain containing 1B 
NUMA1                 0.026   nuclear mitotic apparatus protein 1 
TCOF1                 0.026   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.026   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.026   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.026   Treacher Collins-Franceschetti syndrome 1 isoform c ...
MYH10                 0.025   myosin, heavy polypeptide 10, non-muscle 
LOC100133758          0.025   PREDICTED: hypothetical protein, partial 
PLEC1                 0.025   plectin 1 isoform 11 
PLEC1                 0.025   plectin 1 isoform 10 
PLEC1                 0.025   plectin 1 isoform 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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