TAPBP 24317

Name: TAPBP	Sequence: fasta or formatted (299aa)		NCBI GI: 27436895
Description: tapasin isoform 2 precursor		Referenced in: HLA and Related Proteins
Other entries for this name: alt prot [448aa] tapasin isoform 1 precursor alt prot [412aa] tapasin isoform 3 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.7 38 2 C cysteine 1.0 3 1 D aspartate 3.7 11 3 E glutamate 4.7 14 1 F phenylalanine 2.7 8 1 G glycine 9.0 27 1 H histidine 2.0 6 1 I isoleucine 1.3 4 1 K lysine 1.7 5 1 L leucine 14.7 44 3 M methionine 2.0 6 1 N asparagine 1.0 3 1 P proline 12.0 36 3 Q glutamine 5.0 15 2 R arginine 4.7 14 2 S serine 6.4 19 2 T threonine 5.0 15 1 V valine 5.7 17 2 W tryptophan 2.7 8 1 Y tyrosine 2.0 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tapasin isoform 2 precursor TAPBP 0.968 tapasin isoform 1 precursor TAPBP 0.968 tapasin isoform 3 precursor TAPBPL 0.034 TAP binding protein-like MTF1 0.027 metal-regulatory transcription factor 1 PEX6 0.024 peroxisomal biogenesis factor 6 KCNH3 0.024 potassium voltage-gated channel, subfamily H (eag-re... LOC100287256 0.019 PREDICTED: hypothetical protein LOC100287256 0.019 PREDICTED: hypothetical protein XP_002342497 LOC100293496 0.017 PREDICTED: hypothetical protein FGFBP2 0.017 killer-specific secretory protein of 37 kDa precurso... RERE 0.017 atrophin-1 like protein isoform b RERE 0.017 atrophin-1 like protein isoform a RERE 0.017 atrophin-1 like protein isoform a MKL2 0.015 megakaryoblastic leukemia 2 protein MYO16 0.014 myosin heavy chain Myr 8 GLTSCR1 0.014 glioma tumor suppressor candidate region gene 1 [Ho... TMEM119 0.014 transmembrane protein 119 ADAM19 0.012 ADAM metallopeptidase domain 19 preproprotein PRDM2 0.012 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.012 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.012 retinoblastoma protein-binding zinc finger protein i... SIX5 0.012 sine oculis homeobox homolog 5 LPP 0.012 LIM domain containing preferred translocation partner... FGD1 0.012 faciogenital dysplasia protein PHC3 0.012 polyhomeotic like 3 SMARCC2 0.012 SWI/SNF-related matrix-associated actin-dependent re... VWA5B2 0.012 von Willebrand factor A domain containing 5B2 [Homo... CSF3R 0.012 colony stimulating factor 3 receptor isoform b precu... TBC1D10B 0.010 TBC1 domain family, member 10B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.