Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FGFBP2 Sequence: fasta or formatted (223aa) NCBI GI: 13994345
Description:

killer-specific secretory protein of 37 kDa precursor

Referenced in:

Fibroblast Growth Factors
T cells

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         19           2
 C cysteine            4.5         10           1
 D aspartate           2.2          5           1
 E glutamate           6.3         14           2
 F phenylalanine       3.6          8           2
 G glycine             9.0         20           2
 H histidine           2.2          5           2
 I isoleucine          0.4          1           1
 K lysine              6.3         14           3
 L leucine             8.5         19           3
 M methionine          2.2          5           1
 N asparagine          1.8          4           1
 P proline             9.4         21           1
 Q glutamine           8.5         19           2
 R arginine            6.3         14           2
 S serine              5.8         13           2
 T threonine           7.2         16           2
 V valine              3.6          8           1
 W tryptophan          2.2          5           1
 Y tyrosine            1.3          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   killer-specific secretory protein of 37 kDa precurso... 
FGFBP1                0.086   fibroblast growth factor binding protein 1 
FGFBP3                0.082   fibroblast growth factor binding protein 3 
EIF4G3                0.022   eukaryotic translation initiation factor 4 gamma, 3 ...
TAPBP                 0.022   tapasin isoform 1 precursor 
TAPBP                 0.022   tapasin isoform 3 precursor 
TAPBP                 0.022   tapasin isoform 2 precursor 
UNCX                  0.022   UNC homeobox 
SRRM1                 0.022   serine/arginine repetitive matrix 1 
GPRIN1                0.022   G protein-regulated inducer of neurite outgrowth 1 ...
EIF4G1                0.020   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.020   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.020   eukaryotic translation initiation factor 4 gamma, 1 ...
EP300                 0.020   E1A binding protein p300 
LOC645971             0.018   PREDICTED: similar to hCG2036794 
FLJ22184              0.018   PREDICTED: hypothetical protein FLJ22184 
LOC645971             0.018   PREDICTED: similar to hCG2036794 
FLJ22184              0.018   PREDICTED: hypothetical protein FLJ22184 
LOC645971             0.018   PREDICTED: similar to hCG2036794 
FLJ22184              0.018   PREDICTED: hypothetical protein LOC80164 
KIAA1543              0.018   NEZHA isoform 2 
KIAA1543              0.018   NEZHA isoform 1 
TNFRSF8               0.018   tumor necrosis factor receptor superfamily, member 8...
SYN1                  0.018   synapsin I isoform Ia 
SYN1                  0.018   synapsin I isoform Ib 
PCLO                  0.018   piccolo isoform 2 
PCLO                  0.018   piccolo isoform 1 
POGZ                  0.016   pogo transposable element with ZNF domain isoform 3 ...
POGZ                  0.016   pogo transposable element with ZNF domain isoform 1 ...
POGZ                  0.016   pogo transposable element with ZNF domain isoform 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press