Guide to the Human Genome
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Name: TMEM119 Sequence: fasta or formatted (283aa) NCBI GI: 194097411
Description:

transmembrane protein 119

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.7         33           3
 C cysteine            1.4          4           1
 D aspartate           4.2         12           1
 E glutamate           8.1         23           4
 F phenylalanine       2.8          8           2
 G glycine            10.2         29           3
 H histidine           0.7          2           1
 I isoleucine          2.5          7           1
 K lysine              2.8          8           3
 L leucine             9.9         28           6
 M methionine          1.8          5           1
 N asparagine          0.7          2           1
 P proline            10.2         29           3
 Q glutamine           5.3         15           1
 R arginine            3.9         11           1
 S serine             10.6         30           2
 T threonine           3.5         10           1
 V valine              7.8         22           2
 W tryptophan          0.4          1           1
 Y tyrosine            1.4          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 119 
RPGR                  0.032   retinitis pigmentosa GTPase regulator isoform C [Hom...
PALM3                 0.030   hypothetical protein LOC342979 
RP1L1                 0.030   retinitis pigmentosa 1-like 1 
TNFRSF8               0.024   tumor necrosis factor receptor superfamily, member 8...
SMARCC2               0.024   SWI/SNF-related matrix-associated actin-dependent re...
SMARCC2               0.024   SWI/SNF-related matrix-associated actin-dependent re...
SMARCC2               0.024   SWI/SNF-related matrix-associated actin-dependent r...
KHDRBS1               0.022   KH domain containing, RNA binding, signal transductio...
ZIC5                  0.021   zinc finger protein of the cerebellum 5 
NEFM                  0.021   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.021   neurofilament, medium polypeptide 150kDa isoform 2 ...
PTPRG                 0.019   protein tyrosine phosphatase, receptor type, G prec...
PWWP2A                0.019   PWWP domain containing 2A isoform b 
PWWP2A                0.019   PWWP domain containing 2A isoform a 
MMP11                 0.019   matrix metalloproteinase 11 preproprotein 
LILRB2                0.017   leukocyte immunoglobulin-like receptor, subfamily B...
BASP1                 0.015   brain abundant, membrane attached signal protein 1 [...
HIVEP2                0.015   human immunodeficiency virus type I enhancer bindin...
CDC2L2                0.015   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.015   cell division cycle 2-like 2 isoform 1 
BIN1                  0.015   bridging integrator 1 isoform 6 
BIN1                  0.015   bridging integrator 1 isoform 4 
PCDH15                0.015   protocadherin 15 isoform CD2-1 precursor 
CDC2L1                0.015   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.015   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.015   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.015   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.015   cell division cycle 2-like 1 (PITSLRE proteins) isof...
FSCB                  0.015   fibrous sheath CABYR binding protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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