Guide to the Human Genome
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Name: PCYT1B Sequence: fasta or formatted (330aa) NCBI GI: 253795516
Description:

choline phosphate cytidylyltransferase 1 beta isoform 3

Referenced in:

Lipid Metabolism

Other entries for this name:
alt prot [369aa] choline phosphate cytidylyltransferase 1 beta isoform 1
alt prot [351aa] choline phosphate cytidylyltransferase 1 beta isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         23           1
 C cysteine            1.8          6           1
 D aspartate           6.4         21           2
 E glutamate           9.1         30           2
 F phenylalanine       5.2         17           1
 G glycine             3.9         13           1
 H histidine           3.0         10           1
 I isoleucine          4.5         15           2
 K lysine              6.7         22           1
 L leucine             6.7         22           2
 M methionine          2.4          8           1
 N asparagine          3.3         11           1
 P proline             5.8         19           2
 Q glutamine           4.2         14           1
 R arginine            7.3         24           2
 S serine              6.4         21           2
 T threonine           6.1         20           2
 V valine              6.1         20           2
 W tryptophan          1.2          4           1
 Y tyrosine            3.0         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   choline phosphate cytidylyltransferase 1 beta isofo... 
PCYT1B                0.971   choline phosphate cytidylyltransferase 1 beta isofor...
PCYT1B                0.854   choline phosphate cytidylyltransferase 1 beta isofo...
PCYT1A                0.673   choline phosphate cytidylyltransferase 1 alpha [Homo...
PCYT2                 0.121   phosphate cytidylyltransferase 2, ethanolamine 
SMC2                  0.014   structural maintenance of chromosomes 2 
SMC2                  0.014   structural maintenance of chromosomes 2 
SMC2                  0.014   structural maintenance of chromosomes 2 
LOC284297             0.012   hypothetical protein LOC284297 
LOC727832             0.012   golgi autoantigen, golgin subfamily a-like 
CEP290                0.012   centrosomal protein 290kDa 
C1orf114              0.012   hypothetical protein LOC57821 
TSGA10                0.011   testis specific, 10 
TSGA10                0.011   testis specific, 10 
LOC651807             0.011   PREDICTED: hypothetical protein 
LOC283767             0.009   golgi autoantigen, golgin subfamily a-like 
KIF5B                 0.009   kinesin family member 5B 
ANKRD20A5             0.009   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD20A5             0.009   PREDICTED: ankyrin repeat domain 20 family, member ...
LOC440243             0.009   PREDICTED: Putative golgin subfamily A member 6-lik...
MYH11                 0.009   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.009   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.009   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.009   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
CNKSR1                0.009   connector enhancer of kinase suppressor of Ras 1 [H...
LOC400352             0.008   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.008   PREDICTED: similar to Putative golgin subfamily A m...
MACF1                 0.008   microfilament and actin filament cross-linker protei...
FILIP1L               0.008   filamin A interacting protein 1-like isoform 3 [Hom...
FILIP1L               0.008   filamin A interacting protein 1-like isoform 2 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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