Guide to the Human Genome
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Name: ANKRD20A5 Sequence: fasta or formatted (823aa) NCBI GI: 239751523
Description:

PREDICTED: ankyrin repeat domain 20 family, member A5

Referenced in:

Ankyrin Family

Other entries for this name:
alt mRNA [823aa] PREDICTED: ankyrin repeat domain 20 family, member A5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         54           3
 C cysteine            2.1         17           1
 D aspartate           5.1         42           2
 E glutamate          10.7         88           3
 F phenylalanine       2.1         17           1
 G glycine             3.0         25           1
 H histidine           2.9         24           1
 I isoleucine          5.5         45           2
 K lysine             11.8         97           3
 L leucine            10.0         82           2
 M methionine          2.2         18           1
 N asparagine          5.2         43           2
 P proline             2.4         20           2
 Q glutamine           6.3         52           3
 R arginine            5.0         41           2
 S serine              6.3         52           2
 T threonine           4.9         40           1
 V valine              5.0         41           2
 W tryptophan          0.4          3           1
 X unknown             0.4          3           1
 Y tyrosine            2.3         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: ankyrin repeat domain 20 family, member ... 
ANKRD20A5             1.000   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD20A2             0.878   ankyrin repeat domain 20 family, member A2 
ANKRD20A4             0.876   ankyrin repeat domain 20 family, member A4 
ANKRD20A3             0.874   ankyrin repeat domain 20 family, member A3 
ANKRD20A1             0.873   ankyrin repeat domain 20 family, member A1 
ANKRD62               0.273   PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...
ANKRD62               0.272   PREDICTED: ankyrin repeat domain 62 
ANKRD62               0.272   PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...
LOC100132733          0.217   PREDICTED: similar to FLJ00310 protein 
ANKRD18B              0.209   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.209   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.209   PREDICTED: ankyrin repeat domain 18B 
ANKRD18A              0.206   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.206   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.206   PREDICTED: ankyrin repeat domain 18A 
ANKRD26               0.188   ankyrin repeat domain 26 
ANKRD30A              0.170   ankyrin repeat domain 30A 
ANKRD30B              0.168   ankyrin repeat domain 30B 
CCDC144A              0.160   coiled-coil domain containing 144A 
POTEF                 0.146   prostate, ovary, testis expressed protein on chromo...
POTEE                 0.145   protein expressed in prostate, ovary, testis, and p...
LOC653269             0.143   PREDICTED: similar to protein expressed in prostate,...
LOC653781             0.143   PREDICTED: similar to protein expressed in prostate...
LOC400986             0.143   PREDICTED: protein immuno-reactive with anti-PTH po...
LOC400986             0.142   PREDICTED: protein immuno-reactive with anti-PTH po...
ANKRD36               0.141   PREDICTED: ankyrin repeat domain 36 
ANKRD36B              0.141   ankyrin repeat domain 36B 
POTEB                 0.139   protein expressed in prostate, ovary, testis, and pl...
LOC730658             0.138   PREDICTED: similar to UPF0634 protein KIAA1641 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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