Guide to the Human Genome
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Name: KIF5B Sequence: fasta or formatted (963aa) NCBI GI: 4758648
Description:

kinesin family member 5B

Referenced in:

Kinesins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         70           2
 C cysteine            1.3         13           2
 D aspartate           5.7         55           2
 E glutamate          11.1        107           3
 F phenylalanine       1.9         18           1
 G glycine             4.0         39           4
 H histidine           2.1         20           1
 I isoleucine          4.8         46           2
 K lysine             10.2         98           3
 L leucine             8.8         85           2
 M methionine          2.3         22           2
 N asparagine          5.3         51           2
 P proline             1.9         18           1
 Q glutamine           7.0         67           2
 R arginine            5.5         53           2
 S serine              6.4         62           2
 T threonine           5.4         52           2
 V valine              6.5         63           2
 W tryptophan          0.3          3           1
 Y tyrosine            2.2         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kinesin family member 5B 
KIF5C                 0.748   kinesin family member 5C 
KIF5A                 0.706   kinesin family member 5A 
CENPE                 0.145   centromere protein E 
KIF4A                 0.143   kinesin family member 4 
KIF3A                 0.143   kinesin family member 3A 
KIF3B                 0.139   kinesin family member 3B 
KIF4B                 0.138   kinesin family member 4B 
KIF21A                0.134   kinesin family member 21A 
KIF27                 0.132   kinesin family member 27 
KIF11                 0.131   kinesin family member 11 
KIF21B                0.130   kinesin family member 21B 
KIF15                 0.128   kinesin family member 15 
KIF1B                 0.124   kinesin family member 1B isoform alpha 
KIF1B                 0.124   kinesin family member 1B isoform b 
KIF17                 0.123   kinesin family member 17 isoform b 
KIF17                 0.123   kinesin family member 17 isoform a 
KIF1A                 0.121   axonal transport of synaptic vesicles 
KIF16B                0.120   kinesin-like motor protein C20orf23 
KIF7                  0.118   kinesin family member 7 
KIF3C                 0.117   kinesin family member 3C 
KIF13A                0.115   kinesin family member 13A isoform d 
KIF13A                0.115   kinesin family member 13A isoform c 
KIF13A                0.115   kinesin family member 13A isoform b 
KIF13A                0.115   kinesin family member 13A isoform a 
KIF1C                 0.114   kinesin family member 1C 
KIF13B                0.109   kinesin family member 13B 
KIFC3                 0.106   kinesin family member C3 isoform 2 
KIFC3                 0.106   kinesin family member C3 isoform 3 
KIFC3                 0.106   kinesin family member C3 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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