Guide to the Human Genome
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Name: LOC651807 Sequence: fasta or formatted (238aa) NCBI GI: 239752551
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.7          4           1
 C cysteine            1.3          3           1
 D aspartate           1.7          4           1
 E glutamate          29.4         70           4
 F phenylalanine       1.3          3           2
 G glycine             3.8          9           2
 H histidine           0.0          0           0
 I isoleucine          2.1          5           2
 K lysine             12.2         29           3
 L leucine             1.7          4           1
 M methionine         12.2         29           2
 N asparagine          1.3          3           1
 P proline             2.5          6           1
 Q glutamine          14.3         34           2
 R arginine            7.6         18           1
 S serine              1.3          3           1
 T threonine           1.3          3           1
 V valine              0.8          2           1
 W tryptophan          3.4          8           1
 Y tyrosine            0.4          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC283685             0.753   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC283685             0.549   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC645202             0.431   PREDICTED: hypothetical protein LOC645202 
LOC400352             0.431   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.431   PREDICTED: similar to Putative golgin subfamily A m...
LOC727832             0.423   golgi autoantigen, golgin subfamily a-like 
LOC440243             0.414   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC283767             0.410   golgi autoantigen, golgin subfamily a-like 
LOC100133758          0.380   PREDICTED: hypothetical protein, partial 
LOC100133220          0.315   PREDICTED: hypothetical protein 
LOC647042             0.247   PREDICTED: hypothetical protein isoform 1 
TCHH                  0.210   trichohyalin 
LOC728636             0.189   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC440295             0.189   hypothetical protein LOC440295 
LOC647042             0.187   PREDICTED: hypothetical protein isoform 2 
GOLGA6B               0.170   golgi autoantigen, golgin subfamily a, 6B 
GOLGA6D               0.170   golgi autoantigen, golgin subfamily a, 6D 
GOLGA6C               0.170   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
GOLGA6                0.167   golgi autoantigen, golgin subfamily a, 6 
LOC100133599          0.161   PREDICTED: hypothetical protein 
WDR87                 0.159   NYD-SP11 protein 
GIGYF2                0.150   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.150   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.150   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.150   GRB10 interacting GYF protein 2 isoform b 
MAP1A                 0.148   microtubule-associated protein 1A 
LOC100133599          0.142   PREDICTED: hypothetical protein 
INCENP                0.142   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.142   inner centromere protein antigens 135/155kDa isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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