Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZNF503 Sequence: fasta or formatted (646aa) NCBI GI: 24432032
Description:

zinc finger protein 503

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.8         83           6
 C cysteine            2.0         13           1
 D aspartate           3.4         22           2
 E glutamate           1.4          9           2
 F phenylalanine       1.4          9           1
 G glycine            16.7        108          16
 H histidine           3.4         22           2
 I isoleucine          1.4          9           1
 K lysine              4.5         29           2
 L leucine             8.5         55           2
 M methionine          1.2          8           1
 N asparagine          1.2          8           1
 P proline            12.1         78           2
 Q glutamine           1.7         11           1
 R arginine            2.0         13           1
 S serine             14.2         92           4
 T threonine           5.0         32           2
 V valine              3.6         23           1
 W tryptophan          0.3          2           1
 Y tyrosine            3.1         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 503 
ZNF703                0.439   zinc finger protein 703 
LOR                   0.046   loricrin 
SP8                   0.041   Sp8 transcription factor isoform 1 
ARID1B                0.039   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.039   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.039   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
SP8                   0.036   Sp8 transcription factor isoform 2 
BHLHE22               0.034   basic helix-loop-helix domain containing, class B, 5...
COL3A1                0.030   collagen type III alpha 1 preproprotein 
ARID1A                0.028   AT rich interactive domain 1A isoform a 
ARID1A                0.028   AT rich interactive domain 1A isoform b 
EN2                   0.028   engrailed homeobox 2 
RING1                 0.027   ring finger protein 1 
ELN                   0.027   elastin isoform d precursor 
ELN                   0.027   elastin isoform c precursor 
KRT9                  0.027   keratin 9 
KRT10                 0.027   keratin 10 
ELN                   0.026   elastin isoform e precursor 
ELN                   0.026   elastin isoform a precursor 
DMRTA2                0.026   DMRT-like family A2 
COL1A2                0.026   alpha 2 type I collagen 
KRT2                  0.026   keratin 2 
IRS4                  0.025   insulin receptor substrate 4 
MN1                   0.025   meningioma  1 
TRIO                  0.025   triple functional domain (PTPRF interacting) 
SOX4                  0.025   SRY (sex determining region Y)-box 4 
GSK3A                 0.025   glycogen synthase kinase 3 alpha 
COL19A1               0.025   alpha 1 type XIX collagen precursor 
KRT1                  0.024   keratin 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press