Guide to the Human Genome
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Name: NAP1L5 Sequence: fasta or formatted (182aa) NCBI GI: 24371268
Description:

nucleosome assembly protein 1-like 5

Referenced in:

Histones, Related Proteins, and Modifying Enzymes
Liver

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            18.7         34           5
 C cysteine            2.2          4           1
 D aspartate           8.8         16           2
 E glutamate          19.8         36           7
 F phenylalanine       1.6          3           1
 G glycine             6.6         12           2
 H histidine           1.1          2           1
 I isoleucine          2.2          4           1
 K lysine              8.8         16           2
 L leucine             4.9          9           2
 M methionine          2.7          5           1
 N asparagine          2.7          5           1
 P proline             5.5         10           1
 Q glutamine           4.4          8           1
 R arginine            1.1          2           1
 S serine              3.3          6           1
 T threonine           1.6          3           1
 V valine              1.6          3           1
 W tryptophan          0.5          1           1
 Y tyrosine            1.6          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleosome assembly protein 1-like 5 
NAP1L2                0.166   nucleosome assembly protein 1-like 2 
NAP1L4                0.152   nucleosome assembly protein 1-like 4 
NAP1L1                0.143   nucleosome assembly protein 1-like 1 
NAP1L1                0.143   nucleosome assembly protein 1-like 1 
NAP1L3                0.143   nucleosome assembly protein 1-like 3 
EIF5B                 0.064   eukaryotic translation initiation factor 5B 
TTBK1                 0.061   tau tubulin kinase 1 
CENPB                 0.058   centromere protein B 
ABCF1                 0.058   ATP-binding cassette, sub-family F, member 1 isoform...
MYT1                  0.055   myelin transcription factor 1 
RP1L1                 0.055   retinitis pigmentosa 1-like 1 
DCAF8L2               0.052   DDB1 and CUL4 associated factor 8-like 2 
MICAL3                0.052   microtubule associated monoxygenase, calponin and L...
HMGB1                 0.050   high-mobility group box 1 
EHMT2                 0.050   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.050   euchromatic histone-lysine N-methyltransferase 2 is...
SLC24A1               0.050   solute carrier family 24 (sodium/potassium/calcium ex...
ZFHX3                 0.050   AT-binding transcription factor 1 
LMOD3                 0.050   leiomodin 3 (fetal) 
CDC2L2                0.050   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.050   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.050   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.050   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.050   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.050   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.050   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.050   cell division cycle 2-like 1 (PITSLRE proteins) isof...
BAZ2B                 0.050   bromodomain adjacent to zinc finger domain, 2B [Homo...
POLR3GL               0.050   polymerase (RNA) III (DNA directed) polypeptide G (3...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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