Guide to the Human Genome
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Name: NAP1L1 Sequence: fasta or formatted (391aa) NCBI GI: 4758756
Description:

nucleosome assembly protein 1-like 1

Referenced in:

Histones, Related Proteins, and Modifying Enzymes

Other entries for this name:
alt mRNA [391aa] nucleosome assembly protein 1-like 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         19           2
 C cysteine            1.3          5           1
 D aspartate          10.7         42           5
 E glutamate          15.9         62           4
 F phenylalanine       4.9         19           2
 G glycine             4.3         17           1
 H histidine           1.5          6           1
 I isoleucine          5.1         20           2
 K lysine              9.2         36           3
 L leucine             6.9         27           2
 M methionine          1.8          7           2
 N asparagine          3.3         13           1
 P proline             5.4         21           2
 Q glutamine           4.3         17           2
 R arginine            3.6         14           2
 S serine              3.3         13           1
 T threonine           4.6         18           1
 V valine              5.6         22           2
 W tryptophan          0.8          3           1
 Y tyrosine            2.6         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleosome assembly protein 1-like 1 
NAP1L1                1.000   nucleosome assembly protein 1-like 1 
NAP1L4                0.606   nucleosome assembly protein 1-like 4 
NAP1L2                0.376   nucleosome assembly protein 1-like 2 
NAP1L3                0.238   nucleosome assembly protein 1-like 3 
LOC100129700          0.216   PREDICTED: similar to hCG1805148 
SET                   0.096   SET translocation (myeloid leukemia-associated) iso...
SET                   0.094   SET translocation (myeloid leukemia-associated) iso...
LOC646817             0.076   PREDICTED: similar to SET translocation 
LOC646817             0.076   PREDICTED: similar to SET translocation 
LOC646817             0.076   PREDICTED: similar to SET translocation 
NAP1L5                0.063   nucleosome assembly protein 1-like 5 
LOC100129700          0.062   PREDICTED: similar to hCG1805148 
LOC100129700          0.062   PREDICTED: similar to hCG1805148 
LOC389217             0.061   PREDICTED: similar to SET translocation 
LOC389217             0.061   PREDICTED: similar to SET translocation 
LOC389217             0.061   PREDICTED: similar to SET translocation 
TSPYL4                0.034   TSPY-like 4 
TSPYL1                0.034   TSPY-like 1 
TSPYL6                0.031   TSPY-like 6 
TSPYL2                0.026   TSPY-like 2 
TSPYL5                0.025   TSPY-like 5 
MDN1                  0.025   MDN1, midasin homolog 
LOC100289087          0.025   PREDICTED: hypothetical protein XP_002344239 
LOC728132             0.025   PREDICTED: similar to testis specific protein, Y-li...
LOC728403             0.025   PREDICTED: similar to Testis-specific Y-encoded pro...
LOC728395             0.025   PREDICTED: similar to testis specific protein, Y-li...
TSPY3                 0.025   testis specific protein, Y-linked 3 
TSPY2                 0.025   testis specific protein, Y-linked 2 
JAKMIP3               0.023   Janus kinase and microtubule interacting protein 3 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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