ABCF1 35000

Name: ABCF1	Sequence: fasta or formatted (845aa)		NCBI GI: 69354671
Description: ATP-binding cassette, sub-family F, member 1 isoform a		Referenced in: ATP-binding Cassette Proteins
Other entries for this name: alt prot [807aa] ATP-binding cassette, sub-family F, member 1 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 62 4 C cysteine 0.9 8 1 D aspartate 5.4 46 3 E glutamate 12.4 105 7 F phenylalanine 2.7 23 2 G glycine 6.7 57 2 H histidine 1.7 14 1 I isoleucine 3.6 30 2 K lysine 12.0 101 3 L leucine 9.3 79 5 M methionine 1.8 15 1 N asparagine 3.3 28 2 P proline 5.1 43 3 Q glutamine 6.7 57 10 R arginine 5.3 45 2 S serine 4.1 35 2 T threonine 3.9 33 2 V valine 4.9 41 2 W tryptophan 0.6 5 1 Y tyrosine 2.1 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ATP-binding cassette, sub-family F, member 1 isoform... ABCF1 0.799 ATP-binding cassette, sub-family F, member 1 isoform... ABCF3 0.251 ATP-binding cassette, sub-family F (GCN20), member ... ABCF2 0.232 ATP-binding cassette, sub-family F, member 2 isoform... ABCF2 0.232 ATP-binding cassette, sub-family F, member 2 isoform... WDR87 0.033 NYD-SP11 protein EIF5B 0.032 eukaryotic translation initiation factor 5B RPGR 0.031 retinitis pigmentosa GTPase regulator isoform C [Hom... LOC100133599 0.029 PREDICTED: hypothetical protein NEFH 0.029 neurofilament, heavy polypeptide 200kDa LOC100133758 0.026 PREDICTED: hypothetical protein, partial TCHH 0.026 trichohyalin CDC2L1 0.026 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.026 cell division cycle 2-like 1 (PITSLRE proteins) isof... TRDN 0.026 triadin CDC2L1 0.024 cell division cycle 2-like 1 (PITSLRE proteins) isof... LOC283685 0.024 PREDICTED: golgi autoantigen, golgin subfamily a-li... NEFM 0.024 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.024 neurofilament, medium polypeptide 150kDa isoform 2 ... AP3D1 0.024 adaptor-related protein complex 3, delta 1 subunit ... CDC2L2 0.024 cell division cycle 2-like 2 isoform 4 LOC283685 0.024 PREDICTED: golgi autoantigen, golgin subfamily a-li... CALD1 0.024 caldesmon 1 isoform 1 CDC2L1 0.024 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.024 cell division cycle 2-like 1 (PITSLRE proteins) isof... LOC100294088 0.024 PREDICTED: hypothetical protein, partial TAP1 0.022 transporter 1, ATP-binding cassette, sub-family B [Ho... ATRX 0.022 transcriptional regulator ATRX isoform 2 ATRX 0.022 transcriptional regulator ATRX isoform 1 AP3D1 0.022 adaptor-related protein complex 3, delta 1 subunit ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.