Guide to the Human Genome
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Name: NAP1L4 Sequence: fasta or formatted (375aa) NCBI GI: 5174613
Description:

nucleosome assembly protein 1-like 4

Referenced in:

Histones, Related Proteins, and Modifying Enzymes
Small RNAs in RNA Processing

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         24           3
 C cysteine            0.8          3           1
 D aspartate           8.5         32           3
 E glutamate          13.6         51           4
 F phenylalanine       6.4         24           2
 G glycine             4.8         18           1
 H histidine           2.4          9           1
 I isoleucine          4.3         16           1
 K lysine              8.5         32           3
 L leucine             5.9         22           1
 M methionine          1.6          6           1
 N asparagine          4.0         15           1
 P proline             5.6         21           1
 Q glutamine           2.9         11           1
 R arginine            3.7         14           2
 S serine              5.6         21           2
 T threonine           5.3         20           1
 V valine              6.7         25           3
 W tryptophan          0.8          3           1
 Y tyrosine            2.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleosome assembly protein 1-like 4 
NAP1L1                0.636   nucleosome assembly protein 1-like 1 
NAP1L1                0.636   nucleosome assembly protein 1-like 1 
NAP1L2                0.351   nucleosome assembly protein 1-like 2 
NAP1L3                0.224   nucleosome assembly protein 1-like 3 
LOC100129700          0.180   PREDICTED: similar to hCG1805148 
SET                   0.085   SET translocation (myeloid leukemia-associated) iso...
SET                   0.083   SET translocation (myeloid leukemia-associated) iso...
NAP1L5                0.070   nucleosome assembly protein 1-like 5 
LOC646817             0.068   PREDICTED: similar to SET translocation 
LOC646817             0.068   PREDICTED: similar to SET translocation 
LOC646817             0.068   PREDICTED: similar to SET translocation 
LOC100129700          0.056   PREDICTED: similar to hCG1805148 
LOC100129700          0.056   PREDICTED: similar to hCG1805148 
LOC389217             0.053   PREDICTED: similar to SET translocation 
LOC389217             0.053   PREDICTED: similar to SET translocation 
LOC389217             0.053   PREDICTED: similar to SET translocation 
TSPYL1                0.033   TSPY-like 1 
TSPYL6                0.033   TSPY-like 6 
TSPYL4                0.030   TSPY-like 4 
TSPYL2                0.026   TSPY-like 2 
TSPYL5                0.024   TSPY-like 5 
LOC728132             0.023   PREDICTED: similar to testis specific protein, Y-li...
TSPY3                 0.023   testis specific protein, Y-linked 3 
LOC100289087          0.023   PREDICTED: hypothetical protein XP_002344239 
LOC728403             0.023   PREDICTED: similar to Testis-specific Y-encoded pro...
LOC728395             0.023   PREDICTED: similar to testis specific protein, Y-li...
TSPY2                 0.023   testis specific protein, Y-linked 2 
TSPY1                 0.020   testis specific protein, Y-linked 1 
DCAF8L2               0.020   DDB1 and CUL4 associated factor 8-like 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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