Guide to the Human Genome
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Name: NAP1L2 Sequence: fasta or formatted (460aa) NCBI GI: 11415048
Description:

nucleosome assembly protein 1-like 2

Referenced in:

Histones, Related Proteins, and Modifying Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         26           3
 C cysteine            1.5          7           2
 D aspartate           9.1         42           2
 E glutamate          15.4         71           9
 F phenylalanine       3.7         17           2
 G glycine             7.6         35           2
 H histidine           2.0          9           1
 I isoleucine          5.2         24           2
 K lysine              7.8         36           3
 L leucine             8.0         37           2
 M methionine          1.5          7           1
 N asparagine          4.1         19           1
 P proline             3.5         16           1
 Q glutamine           1.7          8           2
 R arginine            3.7         17           2
 S serine              4.3         20           2
 T threonine           4.8         22           1
 V valine              4.6         21           2
 W tryptophan          0.9          4           1
 Y tyrosine            4.8         22           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleosome assembly protein 1-like 2 
NAP1L1                0.317   nucleosome assembly protein 1-like 1 
NAP1L1                0.317   nucleosome assembly protein 1-like 1 
NAP1L4                0.282   nucleosome assembly protein 1-like 4 
NAP1L3                0.215   nucleosome assembly protein 1-like 3 
NAP1L5                0.062   nucleosome assembly protein 1-like 5 
LOC100129700          0.050   PREDICTED: similar to hCG1805148 
SET                   0.039   SET translocation (myeloid leukemia-associated) iso...
SET                   0.038   SET translocation (myeloid leukemia-associated) iso...
TSPYL4                0.035   TSPY-like 4 
LOC100129700          0.030   PREDICTED: similar to hCG1805148 
LOC100129700          0.030   PREDICTED: similar to hCG1805148 
TSPYL6                0.029   TSPY-like 6 
TSPYL1                0.029   TSPY-like 1 
ANP32A                0.027   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
PELP1                 0.027   proline, glutamic acid and leucine rich protein 1 [...
LOC646817             0.027   PREDICTED: similar to SET translocation 
LOC646817             0.027   PREDICTED: similar to SET translocation 
LOC646817             0.027   PREDICTED: similar to SET translocation 
FAM9A                 0.027   family with sequence similarity 9, member A 
LOC389217             0.026   PREDICTED: similar to SET translocation 
LOC389217             0.026   PREDICTED: similar to SET translocation 
LOC389217             0.026   PREDICTED: similar to SET translocation 
RPGR                  0.024   retinitis pigmentosa GTPase regulator isoform C [Hom...
ANP32E                0.024   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
ANP32E                0.024   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
ANP32E                0.024   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
MYT1                  0.023   myelin transcription factor 1 
ANP32B                0.023   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
SUPT6H                0.023   suppressor of Ty 6 homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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