Guide to the Human Genome
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Name: DCAF8L2 Sequence: fasta or formatted (631aa) NCBI GI: 211904182
Description:

DDB1 and CUL4 associated factor 8-like 2

Referenced in:

WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         35           2
 C cysteine            1.9         12           1
 D aspartate           6.8         43           3
 E glutamate          12.2         77          22
 F phenylalanine       4.6         29           2
 G glycine             7.0         44           2
 H histidine           3.5         22           2
 I isoleucine          2.9         18           2
 K lysine              4.0         25           2
 L leucine             7.0         44           2
 M methionine          0.8          5           1
 N asparagine          4.1         26           2
 P proline             4.0         25           1
 Q glutamine           4.9         31           1
 R arginine            5.5         35           1
 S serine              9.0         57           3
 T threonine           5.5         35           2
 V valine              6.8         43           3
 W tryptophan          1.4          9           1
 Y tyrosine            2.5         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DDB1 and CUL4 associated factor 8-like 2 
DCAF8L1               0.729   DDB1 and CUL4 associated factor 8-like 1 
WDR42A                0.643   H326 
DCAF6                 0.088   IQ motif and WD repeats 1 isoform b 
DCAF6                 0.088   IQ motif and WD repeats 1 isoform a 
WDTC1                 0.076   WD and tetratricopeptide repeats 1 
DCAF5                 0.045   WD repeat domain 22 
MYT1                  0.037   myelin transcription factor 1 
TTBK1                 0.036   tau tubulin kinase 1 
YTHDC1                0.035   splicing factor YT521-B isoform 2 
YTHDC1                0.035   splicing factor YT521-B isoform 1 
PELP1                 0.032   proline, glutamic acid and leucine rich protein 1 [...
WDR87                 0.031   NYD-SP11 protein 
RANGAP1               0.031   Ran GTPase activating protein 1 
HRC                   0.030   histidine rich calcium binding protein precursor [Hom...
MYST4                 0.030   MYST histone acetyltransferase (monocytic leukemia)...
MYT1L                 0.029   myelin transcription factor 1-like 
CDC2L2                0.028   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.028   cell division cycle 2-like 2 isoform 1 
LOC728792             0.028   PREDICTED: hypothetical protein 
CDC2L1                0.028   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.028   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.028   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.028   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.028   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.028   cell division cycle 2-like 1 (PITSLRE proteins) isof...
FAM9A                 0.028   family with sequence similarity 9, member A 
C12orf12              0.028   hypothetical protein LOC196477 
SLC24A1               0.028   solute carrier family 24 (sodium/potassium/calcium ex...
WDR82                 0.028   WD repeat domain 82 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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