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Search of human proteins with 24371260
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24371260 fibronectin type III domain containing 5 [Homo
sapiens]
(137 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24371260 fibronectin type III domain containing 5 [Homo sapiens] 274 1e-74
gi|12383064 fibronectin type III domain containing 4 [Homo sapiens] 126 5e-30
gi|104487611 protein tyrosine phosphatase, receptor type, sigma ... 35 0.019
gi|104487297 protein tyrosine phosphatase, receptor type, sigma ... 35 0.019
gi|104487295 protein tyrosine phosphatase, receptor type, sigma ... 35 0.019
gi|104487006 protein tyrosine phosphatase, receptor type, sigma ... 35 0.019
gi|110431348 deleted in colorectal carcinoma [Homo sapiens] 34 0.043
gi|119220552 sidekick 1 [Homo sapiens] 32 0.16
gi|222352127 sidekick 2 [Homo sapiens] 32 0.21
gi|32967311 ephrin receptor EphA2 [Homo sapiens] 32 0.21
gi|157311649 neogenin homolog 1 [Homo sapiens] 31 0.28
gi|222537743 protein tyrosine phosphatase, receptor type, Q [Hom... 31 0.36
gi|109633041 protein tyrosine phosphatase, receptor type, F isof... 31 0.36
gi|109633039 protein tyrosine phosphatase, receptor type, F isof... 31 0.36
gi|118918395 fibronectin type III domain containing 3A isoform 1... 31 0.36
gi|118918397 fibronectin type III domain containing 3A isoform 2... 31 0.36
gi|19882241 immunoglobulin superfamily, DCC subclass, member 4 [... 31 0.36
gi|134244585 putative neuronal cell adhesion molecule [Homo sapi... 31 0.36
gi|222144290 fibronectin type III domain containing 7 [Homo sapi... 30 0.62
gi|17975768 ephrin receptor EphB3 precursor [Homo sapiens] 30 0.62
gi|110349719 titin isoform N2-A [Homo sapiens] 29 1.1
gi|110349717 titin isoform novex-2 [Homo sapiens] 29 1.1
gi|110349713 titin isoform novex-1 [Homo sapiens] 29 1.1
gi|110349715 titin isoform N2-B [Homo sapiens] 29 1.1
gi|205360934 fibronectin type III domain containing 3B [Homo sap... 29 1.1
gi|205360932 fibronectin type III domain containing 3B [Homo sap... 29 1.1
gi|62241003 cardiomyopathy associated 5 [Homo sapiens] 29 1.1
gi|226492892 coiled-coil domain containing 105 [Homo sapiens] 29 1.4
gi|169211405 PREDICTED: similar to hCG1777996 [Homo sapiens] 28 2.4
gi|169211874 PREDICTED: similar to hCG1777996 [Homo sapiens] 28 2.4
>gi|24371260 fibronectin type III domain containing 5 [Homo sapiens]
Length = 137
Score = 274 bits (701), Expect = 1e-74
Identities = 137/137 (100%), Positives = 137/137 (100%)
Query: 1 MLRFIQEVNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPREAEKMASKN 60
MLRFIQEVNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPREAEKMASKN
Sbjct: 1 MLRFIQEVNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPREAEKMASKN 60
Query: 61 KDEVTMKEMGRNQQLRTGEVLIIVVVLFMWAGVIALFCRQYDIIKDNEPNNNKEKTKSAS 120
KDEVTMKEMGRNQQLRTGEVLIIVVVLFMWAGVIALFCRQYDIIKDNEPNNNKEKTKSAS
Sbjct: 61 KDEVTMKEMGRNQQLRTGEVLIIVVVLFMWAGVIALFCRQYDIIKDNEPNNNKEKTKSAS 120
Query: 121 ETSTPEHQGGGLLRSKI 137
ETSTPEHQGGGLLRSKI
Sbjct: 121 ETSTPEHQGGGLLRSKI 137
>gi|12383064 fibronectin type III domain containing 4 [Homo sapiens]
Length = 234
Score = 126 bits (317), Expect = 5e-30
Identities = 63/123 (51%), Positives = 90/123 (73%), Gaps = 3/123 (2%)
Query: 3 RFIQEVNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPREAEKMASKNKD 62
R I+EVNTTTR+CALW L ED++Y V V++I ++G+SP V F+T + ++++ S +
Sbjct: 91 RVIREVNTTTRACALWGLAEDSDYTVQVRSIGLRGESPPGPRVHFRTLKGSDRLPSNSSS 150
Query: 63 --EVTMKEMGRNQQLRTGEVLIIVVVLFMWAGVIALFCRQYDIIKDNEPNNN-KEKTKSA 119
++T++ + + L+TGEV+IIVVVL MWA VI LFCRQYDIIKDN+ NNN KEK K
Sbjct: 151 PGDITVEGLDGERPLQTGEVVIIVVVLLMWAAVIGLFCRQYDIIKDNDSNNNPKEKGKGP 210
Query: 120 SET 122
++
Sbjct: 211 EQS 213
>gi|104487611 protein tyrosine phosphatase, receptor type, sigma
isoform 4 precursor [Homo sapiens]
Length = 1505
Score = 35.0 bits (79), Expect = 0.019
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 5 IQEVNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPREAEKMASKN 60
I+E TTTR ++ L ++EY + V A++ GQ P SE V+ +T +A A +N
Sbjct: 369 IKEDITTTRY-SIGGLSPNSEYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRN 423
>gi|104487297 protein tyrosine phosphatase, receptor type, sigma
isoform 2 precursor [Homo sapiens]
Length = 1910
Score = 35.0 bits (79), Expect = 0.019
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 5 IQEVNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPREAEKMASKN 60
I+E TTTR ++ L ++EY + V A++ GQ P SE V+ +T +A A +N
Sbjct: 365 IKEDITTTRY-SIGGLSPNSEYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRN 419
>gi|104487295 protein tyrosine phosphatase, receptor type, sigma
isoform 3 precursor [Homo sapiens]
Length = 1501
Score = 35.0 bits (79), Expect = 0.019
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 5 IQEVNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPREAEKMASKN 60
I+E TTTR ++ L ++EY + V A++ GQ P SE V+ +T +A A +N
Sbjct: 365 IKEDITTTRY-SIGGLSPNSEYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRN 419
>gi|104487006 protein tyrosine phosphatase, receptor type, sigma
isoform 1 precursor [Homo sapiens]
Length = 1948
Score = 35.0 bits (79), Expect = 0.019
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 5 IQEVNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPREAEKMASKN 60
I+E TTTR ++ L ++EY + V A++ GQ P SE V+ +T +A A +N
Sbjct: 378 IKEDITTTRY-SIGGLSPNSEYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRN 432
>gi|110431348 deleted in colorectal carcinoma [Homo sapiens]
Length = 1447
Score = 33.9 bits (76), Expect = 0.043
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 17 LWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPR--EAEKMAS 58
+ DL DT Y +QA + +G P S+P+LF+T + +KMA+
Sbjct: 1009 IMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVEHPDKMAN 1052
>gi|119220552 sidekick 1 [Homo sapiens]
Length = 2213
Score = 32.0 bits (71), Expect = 0.16
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 9 NTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPREAEKMASKN 60
++T+ C L L++ Y V + A +I G+SPAS PV A MA +N
Sbjct: 1656 SSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQN 1707
Score = 27.3 bits (59), Expect = 4.0
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 13 RSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPREAEKMASKN 60
R + +LEE EY + +QA + G P SE V +T A +N
Sbjct: 1235 REFTIEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPEN 1282
>gi|222352127 sidekick 2 [Homo sapiens]
Length = 2172
Score = 31.6 bits (70), Expect = 0.21
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 13 RSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKT 49
R + DLEE TEY V VQA + G P S+ V+ +T
Sbjct: 1158 RDYTIEDLEEWTEYRVQVQAFNAIGSGPWSQTVVGRT 1194
>gi|32967311 ephrin receptor EphA2 [Homo sapiens]
Length = 976
Score = 31.6 bits (70), Expect = 0.21
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 16/80 (20%)
Query: 14 SCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPREAEKMASKNKDEVTMKEMGRNQ 73
S L DL DT Y+V VQA++ +GQ S+ F+ T+ G
Sbjct: 491 SVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQ----------------TLSPEGSGN 534
Query: 74 QLRTGEVLIIVVVLFMWAGV 93
G V + VV+L + AGV
Sbjct: 535 LAVIGGVAVGVVLLLVLAGV 554
>gi|157311649 neogenin homolog 1 [Homo sapiens]
Length = 1461
Score = 31.2 bits (69), Expect = 0.28
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 19 DLEEDTEYIVHVQAISIQGQSPASEPVLFKTPR 51
+L DT Y +QA + +G P SE V F+TP+
Sbjct: 1021 ELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 1053
>gi|222537743 protein tyrosine phosphatase, receptor type, Q [Homo
sapiens]
Length = 2299
Score = 30.8 bits (68), Expect = 0.36
Identities = 14/46 (30%), Positives = 28/46 (60%)
Query: 8 VNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPREA 53
+NTT+ + + L++ T+YI+ V A +++G+ S P+ T +A
Sbjct: 808 INTTSLTQNIKVLKKYTQYIIEVSASTLKGEGVRSAPISILTEEDA 853
Score = 26.2 bits (56), Expect = 9.0
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 5 IQEVNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPA-SEPVLFKTPREA 53
++ +N T S L DL+ + EY +V A + G S + F+TP A
Sbjct: 898 LKTINVTETSLELSDLDYNVEYSAYVTASTRFGDGKTRSNIISFQTPEGA 947
>gi|109633041 protein tyrosine phosphatase, receptor type, F isoform
1 precursor [Homo sapiens]
Length = 1907
Score = 30.8 bits (68), Expect = 0.36
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 8 VNTTTRSCALWDL---EEDTEYIVHVQAISIQGQSPASEPVLFKTPRE 52
V+ +R + WDL E+ TEY V V+A + G P S PVL +T +
Sbjct: 659 VDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDED 706
>gi|109633039 protein tyrosine phosphatase, receptor type, F isoform
2 precursor [Homo sapiens]
Length = 1898
Score = 30.8 bits (68), Expect = 0.36
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 8 VNTTTRSCALWDL---EEDTEYIVHVQAISIQGQSPASEPVLFKTPRE 52
V+ +R + WDL E+ TEY V V+A + G P S PVL +T +
Sbjct: 659 VDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDED 706
>gi|118918395 fibronectin type III domain containing 3A isoform 1
[Homo sapiens]
Length = 1198
Score = 30.8 bits (68), Expect = 0.36
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 40 PASEPVLFKTPREAEKMASKNKDEVTMKEMGRNQQLRTGEVLIIVVVLFMWAGVIALFCR 99
P S VLF + R E AS N+D T++ + L + +++VLF + ++ F
Sbjct: 1136 PYSTTVLFISQR-TEPPASTNRD--TVESTRTRRALSDEQCAAVILVLFAFFSILIAFII 1192
Query: 100 QYDIIK 105
QY +IK
Sbjct: 1193 QYFVIK 1198
Score = 28.5 bits (62), Expect = 1.8
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 3 RFIQEVNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPR 51
RF+ + + L E T Y +QA + G+ P S+ +F TP+
Sbjct: 996 RFVSLYRGPCHTYKVQRLNESTSYKFCIQACNEAGEGPLSQEYIFTTPK 1044
Score = 26.9 bits (58), Expect = 5.3
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 20 LEEDTEYIVHVQAISIQGQSPASEPVLFKTP 50
L T Y VQA+S+ G P SE V TP
Sbjct: 819 LSPATTYYCRVQALSVVGAGPFSEVVACVTP 849
Score = 26.6 bits (57), Expect = 6.9
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 19 DLEEDTEYIVHVQAISIQGQSPASEPVLFKT 49
+L+ DT Y + +QA++ G P S + KT
Sbjct: 917 NLQPDTTYRIRIQALNSLGAGPFSHMIKLKT 947
>gi|118918397 fibronectin type III domain containing 3A isoform 2
[Homo sapiens]
Length = 1142
Score = 30.8 bits (68), Expect = 0.36
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 40 PASEPVLFKTPREAEKMASKNKDEVTMKEMGRNQQLRTGEVLIIVVVLFMWAGVIALFCR 99
P S VLF + R E AS N+D T++ + L + +++VLF + ++ F
Sbjct: 1080 PYSTTVLFISQR-TEPPASTNRD--TVESTRTRRALSDEQCAAVILVLFAFFSILIAFII 1136
Query: 100 QYDIIK 105
QY +IK
Sbjct: 1137 QYFVIK 1142
Score = 28.5 bits (62), Expect = 1.8
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 3 RFIQEVNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPR 51
RF+ + + L E T Y +QA + G+ P S+ +F TP+
Sbjct: 940 RFVSLYRGPCHTYKVQRLNESTSYKFCIQACNEAGEGPLSQEYIFTTPK 988
Score = 26.9 bits (58), Expect = 5.3
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 20 LEEDTEYIVHVQAISIQGQSPASEPVLFKTP 50
L T Y VQA+S+ G P SE V TP
Sbjct: 763 LSPATTYYCRVQALSVVGAGPFSEVVACVTP 793
Score = 26.6 bits (57), Expect = 6.9
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 19 DLEEDTEYIVHVQAISIQGQSPASEPVLFKT 49
+L+ DT Y + +QA++ G P S + KT
Sbjct: 861 NLQPDTTYRIRIQALNSLGAGPFSHMIKLKT 891
>gi|19882241 immunoglobulin superfamily, DCC subclass, member 4
[Homo sapiens]
Length = 1250
Score = 30.8 bits (68), Expect = 0.36
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 8 VNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKT----PREAEK--MASKNK 61
VN T + DLE +T+Y +V A S G S S P L T P A + ++S N
Sbjct: 481 VNNDTTELQVRDLEPNTDYEFYVVAYSQLGASRTSTPALVHTLDDVPSAAPQLSLSSPNP 540
Query: 62 DEVTMKEMGRNQQLRTGEVL 81
++ + + L G+V+
Sbjct: 541 SDIRVAWLPLPPSLSNGQVV 560
>gi|134244585 putative neuronal cell adhesion molecule [Homo
sapiens]
Length = 814
Score = 30.8 bits (68), Expect = 0.36
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 2 LRFIQEVNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPREA 53
L + + V+ +T + DLE T Y +++A + +G S AS P L T EA
Sbjct: 470 LEYQEAVSKSTFQHLVSDLEPSTAYSFYIKAYTPRGASSASVPTLASTLGEA 521
>gi|222144290 fibronectin type III domain containing 7 [Homo
sapiens]
Length = 733
Score = 30.0 bits (66), Expect = 0.62
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 9 NTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKT 49
+TT SC + L+ TEY++ V A + G S +S + KT
Sbjct: 245 STTFSSCTISSLQCGTEYLISVLASNDAGSSKSSSAMTLKT 285
Score = 29.3 bits (64), Expect = 1.1
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 7 EVNTTTRSCALWDLEEDTEYIVHVQAIS-IQGQSPASEPVLFKTPREAEKMASKNKDEVT 65
E N TT +C L LE DT+Y + V + + ++G + + P T + ++ + ++D +
Sbjct: 413 ECNDTTPACTLSALECDTKYNITVYSFNEVRGSNMSCTPQFITTAPCSPEIKNVSRDAFS 472
Query: 66 M 66
M
Sbjct: 473 M 473
>gi|17975768 ephrin receptor EphB3 precursor [Homo sapiens]
Length = 998
Score = 30.0 bits (66), Expect = 0.62
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 8 VNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPREAEKMASKNKDEVTMK 67
V + S L L D Y+V V+A ++ G S P F+T E A + ++++ +
Sbjct: 501 VTSQMNSVQLDGLRPDARYVVQVRARTVAGYGQYSRPAEFETTSERGSGAQQLQEQLPLI 560
Query: 68 EMGRNQQLRTGEVLIIVVVLFMWAGVIALFC 98
G V ++ VV VIA+ C
Sbjct: 561 V----GSATAGLVFVVAVV------VIAIVC 581
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 29.3 bits (64), Expect = 1.1
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 5 IQEVNTTTRSCALWDLEEDTEYIVHVQAISIQ--GQSPASEPVLFKTP 50
+ + N T SC + L E EY + A++ G+ SEPV+ K P
Sbjct: 22686 VVDANVQTLSCKVTKLLEGNEYTFRIMAVNKYGVGEPLESEPVVAKNP 22733
Score = 28.9 bits (63), Expect = 1.4
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 11 TTRSCALWDLEEDTEY---IVHVQAISIQGQSPASEPVLFKTPREAE------KMASKNK 61
TT + L D EY I+ + + SPASEPV+ K P + ++ S +K
Sbjct: 30385 TTTMYTVTGLVPDAEYQFRIIAQNDVGLSETSPASEPVVCKDPFDKPSQPGELEILSISK 30444
Query: 62 DEVTMK 67
D VT++
Sbjct: 30445 DSVTLQ 30450
Score = 27.3 bits (59), Expect = 4.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 8 VNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPR 51
V +T CA L E EY + A++ G SP S+P + T R
Sbjct: 19146 VRSTEYPCA--GLVEGLEYSFRIYALNKAGSSPPSKPTEYVTAR 19187
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 29.3 bits (64), Expect = 1.1
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 5 IQEVNTTTRSCALWDLEEDTEYIVHVQAISIQ--GQSPASEPVLFKTP 50
+ + N T SC + L E EY + A++ G+ SEPV+ K P
Sbjct: 16381 VVDANVQTLSCKVTKLLEGNEYTFRIMAVNKYGVGEPLESEPVVAKNP 16428
Score = 28.9 bits (63), Expect = 1.4
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 11 TTRSCALWDLEEDTEY---IVHVQAISIQGQSPASEPVLFKTPREAE------KMASKNK 61
TT + L D EY I+ + + SPASEPV+ K P + ++ S +K
Sbjct: 24080 TTTMYTVTGLVPDAEYQFRIIAQNDVGLSETSPASEPVVCKDPFDKPSQPGELEILSISK 24139
Query: 62 DEVTMK 67
D VT++
Sbjct: 24140 DSVTLQ 24145
Score = 27.3 bits (59), Expect = 4.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 8 VNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPR 51
V +T CA L E EY + A++ G SP S+P + T R
Sbjct: 12841 VRSTEYPCA--GLVEGLEYSFRIYALNKAGSSPPSKPTEYVTAR 12882
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 29.3 bits (64), Expect = 1.1
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 5 IQEVNTTTRSCALWDLEEDTEYIVHVQAISIQ--GQSPASEPVLFKTP 50
+ + N T SC + L E EY + A++ G+ SEPV+ K P
Sbjct: 16314 VVDANVQTLSCKVTKLLEGNEYTFRIMAVNKYGVGEPLESEPVVAKNP 16361
Score = 28.9 bits (63), Expect = 1.4
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 11 TTRSCALWDLEEDTEY---IVHVQAISIQGQSPASEPVLFKTPREAE------KMASKNK 61
TT + L D EY I+ + + SPASEPV+ K P + ++ S +K
Sbjct: 24013 TTTMYTVTGLVPDAEYQFRIIAQNDVGLSETSPASEPVVCKDPFDKPSQPGELEILSISK 24072
Query: 62 DEVTMK 67
D VT++
Sbjct: 24073 DSVTLQ 24078
Score = 27.3 bits (59), Expect = 4.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 8 VNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPR 51
V +T CA L E EY + A++ G SP S+P + T R
Sbjct: 12774 VRSTEYPCA--GLVEGLEYSFRIYALNKAGSSPPSKPTEYVTAR 12815
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 29.3 bits (64), Expect = 1.1
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 5 IQEVNTTTRSCALWDLEEDTEYIVHVQAISIQ--GQSPASEPVLFKTP 50
+ + N T SC + L E EY + A++ G+ SEPV+ K P
Sbjct: 16189 VVDANVQTLSCKVTKLLEGNEYTFRIMAVNKYGVGEPLESEPVVAKNP 16236
Score = 28.9 bits (63), Expect = 1.4
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 11 TTRSCALWDLEEDTEY---IVHVQAISIQGQSPASEPVLFKTPREAE------KMASKNK 61
TT + L D EY I+ + + SPASEPV+ K P + ++ S +K
Sbjct: 23888 TTTMYTVTGLVPDAEYQFRIIAQNDVGLSETSPASEPVVCKDPFDKPSQPGELEILSISK 23947
Query: 62 DEVTMK 67
D VT++
Sbjct: 23948 DSVTLQ 23953
Score = 27.3 bits (59), Expect = 4.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 8 VNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPR 51
V +T CA L E EY + A++ G SP S+P + T R
Sbjct: 12649 VRSTEYPCA--GLVEGLEYSFRIYALNKAGSSPPSKPTEYVTAR 12690
>gi|205360934 fibronectin type III domain containing 3B [Homo
sapiens]
Length = 1204
Score = 29.3 bits (64), Expect = 1.1
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 15 CALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPREA------EKMASKNKDEVTMK 67
C L DL T+Y V V A+ + SEPV F T A K+A ++K +T++
Sbjct: 340 CNLKDLRPATDYHVRVYAMYNSVKGSCSEPVSFTTHSCAPECPFPPKLAHRSKSSLTLQ 398
Score = 26.2 bits (56), Expect = 9.0
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 3 RFIQEVNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPR 51
RFI + + + L E T Y +QA S G+ P SE F T +
Sbjct: 1003 RFISIYRGPSHTYKVQRLTEFTCYSFRIQAASEAGEGPFSETYTFSTTK 1051
>gi|205360932 fibronectin type III domain containing 3B [Homo
sapiens]
Length = 1204
Score = 29.3 bits (64), Expect = 1.1
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 15 CALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPREA------EKMASKNKDEVTMK 67
C L DL T+Y V V A+ + SEPV F T A K+A ++K +T++
Sbjct: 340 CNLKDLRPATDYHVRVYAMYNSVKGSCSEPVSFTTHSCAPECPFPPKLAHRSKSSLTLQ 398
Score = 26.2 bits (56), Expect = 9.0
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 3 RFIQEVNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPR 51
RFI + + + L E T Y +QA S G+ P SE F T +
Sbjct: 1003 RFISIYRGPSHTYKVQRLTEFTCYSFRIQAASEAGEGPFSETYTFSTTK 1051
>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
Length = 4069
Score = 29.3 bits (64), Expect = 1.1
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 5 IQEVNTTTRS--CALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKT 49
++E T + C DLE D Y V V A++ G S SE +F+T
Sbjct: 3756 VEEYRLTVKESYCIFEDLEPDRCYQVWVMAVNFTGCSLPSERAIFRT 3802
>gi|226492892 coiled-coil domain containing 105 [Homo sapiens]
Length = 499
Score = 28.9 bits (63), Expect = 1.4
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 27 IVHVQAISIQGQSPASEPVLFKTPREAEKMASKNKDEVTMKEMGRNQQLRTGEVLI 82
+++ Q++ ++G P SE K P +A+ M + K+E+ + + + EVL+
Sbjct: 173 LINQQSVKLRGYRPKSE----KVPDKADSMLTWEKEELKSMKRKMERDMEKSEVLL 224
>gi|169211405 PREDICTED: similar to hCG1777996 [Homo sapiens]
Length = 217
Score = 28.1 bits (61), Expect = 2.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 107 NEPNNNKEKTKSASETSTPEH 127
N P KEKT+S E + PEH
Sbjct: 13 NPPTTEKEKTESNQEVANPEH 33
>gi|169211874 PREDICTED: similar to hCG1777996 [Homo sapiens]
Length = 217
Score = 28.1 bits (61), Expect = 2.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 107 NEPNNNKEKTKSASETSTPEH 127
N P KEKT+S E + PEH
Sbjct: 13 NPPTTEKEKTESNQEVANPEH 33
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.130 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,049,565
Number of Sequences: 37866
Number of extensions: 186944
Number of successful extensions: 878
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 766
Number of HSP's gapped (non-prelim): 127
length of query: 137
length of database: 18,247,518
effective HSP length: 91
effective length of query: 46
effective length of database: 14,801,712
effective search space: 680878752
effective search space used: 680878752
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.