Guide to the Human Genome
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Name: PTPRQ Sequence: fasta or formatted (2299aa) NCBI GI: 222537743
Description:

protein tyrosine phosphatase, receptor type, Q

Referenced in:

Protein Tyrosine Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8        111           3
 C cysteine            1.0         24           1
 D aspartate           4.6        106           2
 E glutamate           6.0        137           2
 F phenylalanine       4.0         92           2
 G glycine             5.0        115           2
 H histidine           1.4         33           1
 I isoleucine          8.0        183           3
 K lysine              5.4        124           2
 L leucine             7.2        166           3
 M methionine          1.5         35           1
 N asparagine          5.7        130           3
 P proline             6.7        155           2
 Q glutamine           3.4         78           2
 R arginine            3.5         80           2
 S serine              9.0        206           4
 T threonine           9.4        215           2
 V valine              7.4        169           2
 W tryptophan          1.4         32           1
 Y tyrosine            4.7        108           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein tyrosine phosphatase, receptor type, Q [Hom... 
PTPRB                 0.059   protein tyrosine phosphatase, receptor type, B isof...
PTPRB                 0.059   protein tyrosine phosphatase, receptor type, B isof...
PTPRO                 0.057   receptor-type protein tyrosine phosphatase O isoform...
PTPRO                 0.057   receptor-type protein tyrosine phosphatase O isoform...
PTPRO                 0.057   receptor-type protein tyrosine phosphatase O isoform ...
PTPRO                 0.056   receptor-type protein tyrosine phosphatase O isoform...
PTPRO                 0.056   receptor-type protein tyrosine phosphatase O isoform...
PTPRO                 0.056   receptor-type protein tyrosine phosphatase O isoform...
PTPRS                 0.054   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.054   protein tyrosine phosphatase, receptor type, sigma ...
USH2A                 0.053   usherin isoform B 
PTPRT                 0.051   protein tyrosine phosphatase, receptor type, T isof...
PTPRJ                 0.050   protein tyrosine phosphatase, receptor type, J isof...
PTPRF                 0.050   protein tyrosine phosphatase, receptor type, F isof...
PTPRF                 0.050   protein tyrosine phosphatase, receptor type, F isof...
PTPRD                 0.048   protein tyrosine phosphatase, receptor type, D isofor...
PTPRD                 0.048   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.048   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.048   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.048   protein tyrosine phosphatase, receptor type, D isof...
SDK1                  0.048   sidekick 1 
PTPRS                 0.047   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.047   protein tyrosine phosphatase, receptor type, sigma ...
PTPRM                 0.047   protein tyrosine phosphatase, receptor type, M isof...
PTPRH                 0.046   protein tyrosine phosphatase, receptor type, H isof...
PTPRH                 0.046   protein tyrosine phosphatase, receptor type, H isof...
PTPRK                 0.046   protein tyrosine phosphatase, receptor type, K isofo...
PTPRK                 0.044   protein tyrosine phosphatase, receptor type, K isof...
PTPRT                 0.043   protein tyrosine phosphatase, receptor type, T isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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