| Name: IGDCC3 | Sequence: fasta or formatted (814aa) | NCBI GI: 134244585 | |
|
Description: putative neuronal cell adhesion molecule
|
Referenced in:
| ||
|
Composition:
Amino acid Percentage Count Longest homopolymer A alanine 9.7 79 3 C cysteine 2.0 16 1 D aspartate 2.9 24 2 E glutamate 6.0 49 2 F phenylalanine 2.2 18 1 G glycine 9.1 74 2 H histidine 2.3 19 1 I isoleucine 4.2 34 2 K lysine 2.6 21 1 L leucine 10.0 81 6 M methionine 0.7 6 1 N asparagine 2.8 23 3 P proline 9.5 77 4 Q glutamine 5.0 41 1 R arginine 6.5 53 2 S serine 7.7 63 3 T threonine 6.3 51 2 V valine 7.6 62 2 W tryptophan 1.1 9 1 Y tyrosine 1.7 14 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 putative neuronal cell adhesion molecule LOC343052 0.310 PREDICTED: similar to hCG1996527 LOC343052 0.310 PREDICTED: similar to hCG1996527 LOC343052 0.308 PREDICTED: similar to hCG1996527 PRTG 0.280 protogenin IGDCC4 0.230 immunoglobulin superfamily, DCC subclass, member 4 [... DCC 0.143 deleted in colorectal carcinoma NEO1 0.134 neogenin homolog 1 BOC 0.095 brother of CDO CNTN3 0.094 contactin 3 HMCN2 0.091 PREDICTED: hemicentin 2 HMCN2 0.091 PREDICTED: hemicentin 2 HMCN2 0.091 PREDICTED: hemicentin 2 ROBO1 0.089 roundabout 1 isoform b ROBO1 0.089 roundabout 1 isoform a ROBO2 0.088 roundabout, axon guidance receptor, homolog 2 isofo... ROBO2 0.088 roundabout, axon guidance receptor, homolog 2 isofor... CNTN6 0.086 contactin 6 ROBO1 0.085 roundabout 1 isoform d ROBO1 0.085 roundabout 1 isoform c LOC642132 0.085 PREDICTED: similar to roundabout 1 isoform 1 LOC642132 0.085 PREDICTED: similar to roundabout 1 isoform 2 PTPRS 0.085 protein tyrosine phosphatase, receptor type, sigma ... SDK2 0.084 sidekick 2 L1CAM 0.084 L1 cell adhesion molecule isoform 3 precursor [Homo... L1CAM 0.084 L1 cell adhesion molecule isoform 2 precursor L1CAM 0.084 L1 cell adhesion molecule isoform 1 precursor PTPRS 0.083 protein tyrosine phosphatase, receptor type, sigma ... PTPRS 0.083 protein tyrosine phosphatase, receptor type, sigma ... PTPRD 0.082 protein tyrosine phosphatase, receptor type, D isofo...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
