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Search of human proteins with 239757099
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757099 PREDICTED: hypothetical protein [Homo sapiens]
(208 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757099 PREDICTED: hypothetical protein [Homo sapiens] 435 e-122
gi|239751605 PREDICTED: hypothetical protein XP_002347934 [Homo ... 430 e-121
gi|239746122 PREDICTED: hypothetical protein XP_002344202 [Homo ... 430 e-121
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 48 7e-06
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 48 7e-06
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 48 7e-06
gi|59853099 dynamin 1 isoform 1 [Homo sapiens] 48 7e-06
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 47 2e-05
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 46 2e-05
gi|169162343 PREDICTED: hypothetical protein [Homo sapiens] 45 3e-05
gi|113411617 PREDICTED: hypothetical protein [Homo sapiens] 45 3e-05
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 45 4e-05
gi|169207534 PREDICTED: hypothetical protein [Homo sapiens] 45 4e-05
gi|50511941 EMI domain containing 1 [Homo sapiens] 45 4e-05
gi|226498192 atonal homolog 8 [Homo sapiens] 45 6e-05
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 44 1e-04
gi|56549117 dynamin 1 isoform 2 [Homo sapiens] 44 1e-04
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 43 2e-04
gi|169214023 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|169214468 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1... 43 2e-04
gi|7710129 LIM domain only 6 [Homo sapiens] 43 2e-04
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 43 2e-04
gi|18079216 CASK interacting protein 1 [Homo sapiens] 42 3e-04
gi|188536004 zinc finger protein 469 [Homo sapiens] 42 3e-04
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 42 3e-04
gi|118402590 myosin XV [Homo sapiens] 42 4e-04
gi|11386183 WAS protein family, member 2 [Homo sapiens] 42 4e-04
gi|19924099 synapsin I isoform Ia [Homo sapiens] 42 4e-04
gi|19924097 synapsin I isoform Ib [Homo sapiens] 42 4e-04
>gi|239757099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 208
Score = 435 bits (1118), Expect = e-122
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 1 MYQGLGESPHKGESELGRKDAKATETRESAVQRQGTAGHDLRKGHRKQLEDTGSPAPTIR 60
MYQGLGESPHKGESELGRKDAKATETRESAVQRQGTAGHDLRKGHRKQLEDTGSPAPTIR
Sbjct: 1 MYQGLGESPHKGESELGRKDAKATETRESAVQRQGTAGHDLRKGHRKQLEDTGSPAPTIR 60
Query: 61 AHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGR 120
AHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGR
Sbjct: 61 AHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGR 120
Query: 121 RPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLATGPAQPTSPRLVF 180
RPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLATGPAQPTSPRLVF
Sbjct: 121 RPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLATGPAQPTSPRLVF 180
Query: 181 AWSRGARRERSSRGGIFARPRWGKDYNC 208
AWSRGARRERSSRGGIFARPRWGKDYNC
Sbjct: 181 AWSRGARRERSSRGGIFARPRWGKDYNC 208
>gi|239751605 PREDICTED: hypothetical protein XP_002347934 [Homo
sapiens]
Length = 208
Score = 430 bits (1106), Expect = e-121
Identities = 206/208 (99%), Positives = 207/208 (99%)
Query: 1 MYQGLGESPHKGESELGRKDAKATETRESAVQRQGTAGHDLRKGHRKQLEDTGSPAPTIR 60
MYQGLGESPHKGESELGRKDAKATETRESAVQRQGTAGHDLRKGHRKQLEDTGSPAPTIR
Sbjct: 1 MYQGLGESPHKGESELGRKDAKATETRESAVQRQGTAGHDLRKGHRKQLEDTGSPAPTIR 60
Query: 61 AHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGR 120
AHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGR
Sbjct: 61 AHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGR 120
Query: 121 RPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLATGPAQPTSPRLVF 180
RPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALR+VLATGPAQPTSPRLV
Sbjct: 121 RPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRQVLATGPAQPTSPRLVS 180
Query: 181 AWSRGARRERSSRGGIFARPRWGKDYNC 208
AWSRGARRERSSRGGIFARPRWGKDYNC
Sbjct: 181 AWSRGARRERSSRGGIFARPRWGKDYNC 208
>gi|239746122 PREDICTED: hypothetical protein XP_002344202 [Homo
sapiens]
Length = 208
Score = 430 bits (1106), Expect = e-121
Identities = 206/208 (99%), Positives = 207/208 (99%)
Query: 1 MYQGLGESPHKGESELGRKDAKATETRESAVQRQGTAGHDLRKGHRKQLEDTGSPAPTIR 60
MYQGLGESPHKGESELGRKDAKATETRESAVQRQGTAGHDLRKGHRKQLEDTGSPAPTIR
Sbjct: 1 MYQGLGESPHKGESELGRKDAKATETRESAVQRQGTAGHDLRKGHRKQLEDTGSPAPTIR 60
Query: 61 AHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGR 120
AHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGR
Sbjct: 61 AHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGR 120
Query: 121 RPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLATGPAQPTSPRLVF 180
RPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALR+VLATGPAQPTSPRLV
Sbjct: 121 RPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRQVLATGPAQPTSPRLVS 180
Query: 181 AWSRGARRERSSRGGIFARPRWGKDYNC 208
AWSRGARRERSSRGGIFARPRWGKDYNC
Sbjct: 181 AWSRGARRERSSRGGIFARPRWGKDYNC 208
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 47.8 bits (112), Expect = 7e-06
Identities = 44/147 (29%), Positives = 56/147 (38%), Gaps = 21/147 (14%)
Query: 49 LEDTGSPAP--TIRAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRA 106
L SPAP T A A P A P + + + P S + PPET A
Sbjct: 154 LAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTA 213
Query: 107 RLAWAPRFLPTNGRRPSPPRPPMSAPTP------PLGKSEPGEPETSG----PRAYLRDP 156
P P +PP + PTP PL S P PET+ P A DP
Sbjct: 214 APPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAP--PETTAVPPTPSATTLDP 271
Query: 157 GASAALRKVL-------ATGPAQPTSP 176
+++A + AT PA P+SP
Sbjct: 272 SSASAPPETTAAPPTPSATTPAPPSSP 298
Score = 29.3 bits (64), Expect = 2.5
Identities = 25/101 (24%), Positives = 36/101 (35%), Gaps = 5/101 (4%)
Query: 75 PEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRPSPPRPPMSAPTP 134
P+ + + R + S +P P + A P T PS PP + P
Sbjct: 133 PQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAP 192
Query: 135 PLGKSEPGEPETSGPRAYLRDPGASAALRKVLATGPAQPTS 175
P + T P + P +AA AT PA P+S
Sbjct: 193 PTPSA-----TTQAPPSSSAPPETTAAPPTPPATTPAPPSS 228
Score = 29.3 bits (64), Expect = 2.5
Identities = 24/96 (25%), Positives = 33/96 (34%), Gaps = 19/96 (19%)
Query: 52 TGSPAPTIRAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWA 111
+ +P T A A P A P + + P+S + PPET A
Sbjct: 228 SSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTA----- 282
Query: 112 PRFLPTNGRRPSPPRPPMSAPTPPLGKSEPGEPETS 147
+PP P + P PP S P ET+
Sbjct: 283 -----------APPTPSATTPAPP---SSPAPQETT 304
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 47.8 bits (112), Expect = 7e-06
Identities = 44/147 (29%), Positives = 56/147 (38%), Gaps = 21/147 (14%)
Query: 49 LEDTGSPAP--TIRAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRA 106
L SPAP T A A P A P + + + P S + PPET A
Sbjct: 154 LAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTA 213
Query: 107 RLAWAPRFLPTNGRRPSPPRPPMSAPTP------PLGKSEPGEPETSG----PRAYLRDP 156
P P +PP + PTP PL S P PET+ P A DP
Sbjct: 214 APPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAP--PETTAVPPTPSATTLDP 271
Query: 157 GASAALRKVL-------ATGPAQPTSP 176
+++A + AT PA P+SP
Sbjct: 272 SSASAPPETTAAPPTPSATTPAPPSSP 298
Score = 29.3 bits (64), Expect = 2.5
Identities = 25/101 (24%), Positives = 36/101 (35%), Gaps = 5/101 (4%)
Query: 75 PEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRPSPPRPPMSAPTP 134
P+ + + R + S +P P + A P T PS PP + P
Sbjct: 133 PQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAP 192
Query: 135 PLGKSEPGEPETSGPRAYLRDPGASAALRKVLATGPAQPTS 175
P + T P + P +AA AT PA P+S
Sbjct: 193 PTPSA-----TTQAPPSSSAPPETTAAPPTPPATTPAPPSS 228
Score = 29.3 bits (64), Expect = 2.5
Identities = 24/96 (25%), Positives = 33/96 (34%), Gaps = 19/96 (19%)
Query: 52 TGSPAPTIRAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWA 111
+ +P T A A P A P + + P+S + PPET A
Sbjct: 228 SSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTA----- 282
Query: 112 PRFLPTNGRRPSPPRPPMSAPTPPLGKSEPGEPETS 147
+PP P + P PP S P ET+
Sbjct: 283 -----------APPTPSATTPAPP---SSPAPQETT 304
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 47.8 bits (112), Expect = 7e-06
Identities = 44/147 (29%), Positives = 56/147 (38%), Gaps = 21/147 (14%)
Query: 49 LEDTGSPAP--TIRAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRA 106
L SPAP T A A P A P + + + P S + PPET A
Sbjct: 154 LAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTA 213
Query: 107 RLAWAPRFLPTNGRRPSPPRPPMSAPTP------PLGKSEPGEPETSG----PRAYLRDP 156
P P +PP + PTP PL S P PET+ P A DP
Sbjct: 214 APPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAP--PETTAVPPTPSATTLDP 271
Query: 157 GASAALRKVL-------ATGPAQPTSP 176
+++A + AT PA P+SP
Sbjct: 272 SSASAPPETTAAPPTPSATTPAPPSSP 298
Score = 29.3 bits (64), Expect = 2.5
Identities = 25/101 (24%), Positives = 36/101 (35%), Gaps = 5/101 (4%)
Query: 75 PEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRPSPPRPPMSAPTP 134
P+ + + R + S +P P + A P T PS PP + P
Sbjct: 133 PQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAP 192
Query: 135 PLGKSEPGEPETSGPRAYLRDPGASAALRKVLATGPAQPTS 175
P + T P + P +AA AT PA P+S
Sbjct: 193 PTPSA-----TTQAPPSSSAPPETTAAPPTPPATTPAPPSS 228
Score = 29.3 bits (64), Expect = 2.5
Identities = 24/96 (25%), Positives = 33/96 (34%), Gaps = 19/96 (19%)
Query: 52 TGSPAPTIRAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWA 111
+ +P T A A P A P + + P+S + PPET A
Sbjct: 228 SSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTA----- 282
Query: 112 PRFLPTNGRRPSPPRPPMSAPTPPLGKSEPGEPETS 147
+PP P + P PP S P ET+
Sbjct: 283 -----------APPTPSATTPAPP---SSPAPQETT 304
>gi|59853099 dynamin 1 isoform 1 [Homo sapiens]
Length = 864
Score = 47.8 bits (112), Expect = 7e-06
Identities = 38/130 (29%), Positives = 51/130 (39%), Gaps = 20/130 (15%)
Query: 52 TGSPAPTIRAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPT-GPPETRARLAW 110
T P P + + +++ G R P +SP P RA A +R P GPP + L
Sbjct: 752 TPMPPPVDDSWLQVQSVPAGRRSPTSSPTPQRRAPAVPPARPGSRGPAPGPPPAGSALGG 811
Query: 111 APRFLPTNGRRPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLATGP 170
AP G P P PP P+ P ++ PG P SG P
Sbjct: 812 APPVPSRPGASPDPFGPPPQVPSRP-NRAPPGVPSRSG------------------QASP 852
Query: 171 AQPTSPRLVF 180
++P SPR F
Sbjct: 853 SRPESPRPPF 862
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 46.6 bits (109), Expect = 2e-05
Identities = 42/140 (30%), Positives = 52/140 (37%), Gaps = 15/140 (10%)
Query: 47 KQLEDTGSPAPTIRAHTRRKALGPGERGPEASPRPA--PRARAHAHSRRLPASPTGPPET 104
K L+ P T ALGP P A+P P+ P A + LP+ P PP
Sbjct: 266 KGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQ 325
Query: 105 RARLAWAPRFLPTNGRRPSPPRPPMSAP---------TPPLGKSEPGEPETSGPRAYLRD 155
+P T+ PSPP P++ P PPL P P S P + L
Sbjct: 326 ATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPL--QAPPSPPASPPLSPLAT 383
Query: 156 PGASA--ALRKVLATGPAQP 173
P A AL L P P
Sbjct: 384 PSPQAPNALAVHLLQAPFSP 403
Score = 33.9 bits (76), Expect = 0.10
Identities = 38/120 (31%), Positives = 46/120 (38%), Gaps = 21/120 (17%)
Query: 75 PEASPRP-APRARAHAHSRRLPASPTGPPETRARLA------WAPRFLPTNGRRPS---- 123
P A+P P AP A A H + P SP P +A + +P P + PS
Sbjct: 380 PLATPSPQAPNALA-VHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAP 438
Query: 124 ----PPRPPMSAPTPPLGKSEP-GEPETSGPRAYLRDPGASAALRKVLATGPAQ--PTSP 176
PP PP S P P P P + P L P A LAT P Q P+ P
Sbjct: 439 PLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAP--PALATPPLQALPSPP 496
Score = 33.1 bits (74), Expect = 0.17
Identities = 46/186 (24%), Positives = 61/186 (32%), Gaps = 33/186 (17%)
Query: 18 RKDAKATETRESAVQRQGTAGHDLRKGHRKQLEDTGSPAPTIRAHTRRKALGPG------ 71
R A R+++ GT + + R + G P P A R GP
Sbjct: 144 RSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSA 203
Query: 72 ------ERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRPSPP 125
E P A RP+ + R +S P + AR + R P PS P
Sbjct: 204 SEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQP 263
Query: 126 --------RPPMSAP--------TPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLATG 169
RPP P PL S P S P + P A +L + L +
Sbjct: 264 KPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPS----PSAPPSL-QTLPSP 318
Query: 170 PAQPTS 175
PA P S
Sbjct: 319 PATPPS 324
Score = 30.4 bits (67), Expect = 1.1
Identities = 41/152 (26%), Positives = 50/152 (32%), Gaps = 38/152 (25%)
Query: 75 PEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGR-------------R 121
P A+P P A ++P SP P +A PR PT G
Sbjct: 515 PLATPPPQAPPVLAAPLLQVPPSPPASPTLQA-----PRRPPTPGPDTSVSGPRLTLALA 569
Query: 122 PSPPRPPMSAPTPPL------GKSEPGEPETSGPRAYLRDPGASAAL-----RKVLATGP 170
P PP PP +P+ L G S R Y P AA ++ A P
Sbjct: 570 PGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHP 629
Query: 171 AQPTSPRLVFAWSRGARRERSSRGGIFARPRW 202
A AWSRG + RG A W
Sbjct: 630 A---------AWSRGPAPPLAFRGAPGAPLPW 652
Score = 28.5 bits (62), Expect = 4.2
Identities = 29/103 (28%), Positives = 33/103 (32%), Gaps = 27/103 (26%)
Query: 79 PRPAPRARAHAHSRRLPASPTG------PPETRARLAWAPRFLPTNGRRPSPPRPPMSAP 132
P P + S LP SP PP A L P P + +P RPP P
Sbjct: 496 PASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGP 555
Query: 133 TPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLATGPAQPTS 175
+ SGPR L LA GP P S
Sbjct: 556 ----------DTSVSGPR-----------LTLALAPGPPPPPS 577
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 46.2 bits (108), Expect = 2e-05
Identities = 39/150 (26%), Positives = 52/150 (34%), Gaps = 13/150 (8%)
Query: 10 HKGESELGRKDAKATE-TRESAVQRQGTAGHDLRKGHRKQLEDTGSPAPTIRAHTRRKAL 68
H + GR + + +RE Q D R+ E + P P++R
Sbjct: 149 HGAHGDGGRASSLLSRFSREEFPTLQAAGDQDKAAKERESAEQSSGPGPSLRPQNSTTWR 208
Query: 69 GPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRPSPPRPP 128
G RGP+ P + H H R P+GPP+ F P G P PP
Sbjct: 209 DGGGRGPDELEGPDSKLH-HGHDPRGGLQPSGPPQ----------FPPYRGMMPPFMYPP 257
Query: 129 MSAPTPPLGKSEPGE-PETSGPRAYLRDPG 157
PP G P P GP + R G
Sbjct: 258 YLPFPPPYGPQGPYRYPTPDGPSRFPRVAG 287
Score = 43.5 bits (101), Expect = 1e-04
Identities = 33/88 (37%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 89 AHSRRLPASPTGPPETRARLAWAPRFLPTNGRRPSPPR-PPMSAPTPPLGKSEPGEPETS 147
A +RL A P PP + A P +P P+PP PP SAPTP ++EP EP +
Sbjct: 499 APDKRLKAEPAAPPAAPSTPA-PPPAVPK--ELPAPPAPPPASAPTP---ETEPEEPAQA 552
Query: 148 GPRAYLRDPGASAALRKVLATGPAQPTS 175
P PG +AA V G TS
Sbjct: 553 PPAQSTPTPGVAAAPTLVSGGGSTSSTS 580
Score = 33.1 bits (74), Expect = 0.17
Identities = 45/150 (30%), Positives = 54/150 (36%), Gaps = 22/150 (14%)
Query: 29 SAVQRQGTAGHDLRKGHRKQLEDTGSPAPTIRA---HTRRK-ALGPGERGPEASPRPAPR 84
SAV R H G ++ L S ++ A H R K L +GP SPRP R
Sbjct: 1460 SAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPGLPQAPQGP--SPRPPTR 1517
Query: 85 ARAHAHSRRLPASP---------TGPPETRARLAWAPRFLPTNGRRPSPPRPPM-----S 130
+ L + P G T A F P RR PPR P S
Sbjct: 1518 YEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGVSPFPPK--RRERPPRKPELLQEES 1575
Query: 131 APTPPLGKSEPGEPETSGPRAYLRDPGASA 160
P P +PE GP+A RD G A
Sbjct: 1576 LPPPHSSGFLGSKPEGPGPQAESRDTGTEA 1605
Score = 31.2 bits (69), Expect = 0.65
Identities = 42/168 (25%), Positives = 61/168 (36%), Gaps = 44/168 (26%)
Query: 23 ATETRESAVQRQGTAGHDLRKGHRKQLEDTGSPAPTIRAHTRRKALGPGERGPEASPRPA 82
A+ETR +G+ ++ K R++ +TGS T L P ++ P
Sbjct: 1084 ASETRS-----EGSEYEEIPKRRRQRGSETGS-------ETHESDLAPSDK-----EAPT 1126
Query: 83 PRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRPSPPR-------------PPM 129
P+ L P PP A + AP G R PR PP
Sbjct: 1127 PKEGT------LTQVPLAPPPPGAPPSPAPARFTARGGRVFTPRGVPSRRGRGGGRPPPQ 1180
Query: 130 SAP--TPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLATGPAQPTS 175
P +PP P +P T GP ++P L++ L GP P +
Sbjct: 1181 VCPGWSPPAKSLAPKKPPT-GPLPPSKEP-----LKEKLIPGPLSPVA 1222
Score = 29.3 bits (64), Expect = 2.5
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
Query: 98 PTGPPETRARLAWAPRFLPTNGRRPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPG 157
P+G P + L LP PP PP P PP P P P +R P
Sbjct: 1971 PSGAPAQQMLLPMVDSQLPVVNFGSLPPAPP---PAPPPLSLLPVGPALQPPSLAVRPPP 2027
Query: 158 ASAALRKVLATGPAQP 173
A A +VL + PA+P
Sbjct: 2028 APAT--RVLPS-PARP 2040
>gi|169162343 PREDICTED: hypothetical protein [Homo sapiens]
Length = 189
Score = 45.4 bits (106), Expect = 3e-05
Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 10/140 (7%)
Query: 60 RAHTRRKALGPGER--GPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPT 117
R +R+ G GE GP +S RPA R A + R PA+ P + + A R +
Sbjct: 13 RGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPVQAGSGRASRRRAV-- 70
Query: 118 NGRRPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLATGPAQPTSP- 176
RR S P+S P PL S PG P+++ R + + VLA A P++P
Sbjct: 71 --RRVSGRWLPLSRPLLPL-LSHPGWPDSASSRTLSAESTPPHPHKLVLAPFAASPSAPW 127
Query: 177 --RLVFAWSRGARRERSSRG 194
V + RGA RE+++ G
Sbjct: 128 SLGSVRSLERGAAREQAACG 147
>gi|113411617 PREDICTED: hypothetical protein [Homo sapiens]
Length = 189
Score = 45.4 bits (106), Expect = 3e-05
Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 10/140 (7%)
Query: 60 RAHTRRKALGPGER--GPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPT 117
R +R+ G GE GP +S RPA R A + R PA+ P + + A R +
Sbjct: 13 RGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAGCLPVQAGSGRASRRRAV-- 70
Query: 118 NGRRPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLATGPAQPTSP- 176
RR S P+S P PL S PG P+++ R + + VLA A P++P
Sbjct: 71 --RRVSGRWLPLSRPLLPL-LSHPGWPDSASSRTLSAESTPPHPHKLVLAPFAASPSAPW 127
Query: 177 --RLVFAWSRGARRERSSRG 194
V + RGA RE+++ G
Sbjct: 128 SLGSVRSLERGAAREQAACG 147
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 45.1 bits (105), Expect = 4e-05
Identities = 56/194 (28%), Positives = 67/194 (34%), Gaps = 47/194 (24%)
Query: 35 GTAGHDLRKGHRKQLEDTGSPAPTIRAHTRRKALGPGERG-PEASPRPAPRARAHAHSRR 93
G AG + ++G R + TG P P + GPG RG P A P+ A
Sbjct: 461 GPAGEEGKRGARGEPGPTGLPGPP------GERGGPGSRGFPGADGVAGPKGPAGERGSP 514
Query: 94 LPASPTGPPETRAR-----------LAWAPRFLPTNGR-----------RPSPPRPP--- 128
PA P G P R L +P +G+ RP PP PP
Sbjct: 515 GPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGAR 574
Query: 129 -----MSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRK---VLATGPAQPTSPRLVF 180
M P P K GEP +G R PGA K A GP P P
Sbjct: 575 GQAGVMGFPGP---KGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGP---- 627
Query: 181 AWSRGARRERSSRG 194
A RG + S G
Sbjct: 628 AGERGEQGPAGSPG 641
Score = 43.9 bits (102), Expect = 1e-04
Identities = 51/182 (28%), Positives = 61/182 (33%), Gaps = 26/182 (14%)
Query: 35 GTAGHDLRKGHRKQLEDTGSPAPTIRAHTRRKALGPGERG-------PEASPRPAPRARA 87
G AG G G+P P A R PG+RG P S P + +
Sbjct: 929 GPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPS 988
Query: 88 HAHSRRLPASPTGPPET-----RARLAWAPRFLPTNGRRPSP----------PRPPMSAP 132
A R P P GPP + AP + GR SP P P AP
Sbjct: 989 GASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAP 1048
Query: 133 TPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLATGPAQPTSPRLVFAWSRGARRERSS 192
P G SG R G + + V A GPA P PR +G E+
Sbjct: 1049 GAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPR----GDKGETGEQGD 1104
Query: 193 RG 194
RG
Sbjct: 1105 RG 1106
Score = 39.3 bits (90), Expect = 0.002
Identities = 55/205 (26%), Positives = 66/205 (32%), Gaps = 28/205 (13%)
Query: 6 GESPHKGES----ELGRKDAKATETRESAVQRQGTAGHDLRKGHRKQLEDTGSPAP---- 57
GE GE+ ++G + R A G G+D G TG P
Sbjct: 287 GEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFP 346
Query: 58 -TIRAHTRRKALGP-GERGPEA-SPRPAPRARAHAHSRRLPASPTGPPETRAR-----LA 109
+ A GP G GP+ P P A A G P + +A
Sbjct: 347 GAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIA 406
Query: 110 WAPRFLPTNGRRPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLATG 169
AP F R PS P+ P P P EPG P + G D GA V G
Sbjct: 407 GAPGF--PGARGPSGPQGPGGPPGPKGNSGEPGAPGSKG------DTGAKGEPGPVGVQG 458
Query: 170 PAQPTSPRLVFAWSRGARRERSSRG 194
P P RGAR E G
Sbjct: 459 PPGPAGEE----GKRGARGEPGPTG 479
Score = 36.6 bits (83), Expect = 0.016
Identities = 43/179 (24%), Positives = 54/179 (30%), Gaps = 52/179 (29%)
Query: 27 RESAVQRQGTAGHDLRKGHRKQLEDTGSPAPTIRAHTRRKALGPGERGPEASPRPA-PRA 85
RE A +G+ G D G + +TG P PG G +P P P
Sbjct: 1014 REGAPGAEGSPGRDGSPGAKGDRGETGPAGP------------PGAPGAPGAPGPVGPAG 1061
Query: 86 RAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRPSPPRPP----------------- 128
++ PA P GP P R P+ P+ P
Sbjct: 1062 KSGDRGETGPAGPAGPVG------------PVGARGPAGPQGPRGDKGETGEQGDRGIKG 1109
Query: 129 -------MSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLAT---GPAQPTSPR 177
P PP E G SGP PG++ A K GP P PR
Sbjct: 1110 HRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPR 1168
Score = 35.8 bits (81), Expect = 0.027
Identities = 53/185 (28%), Positives = 68/185 (36%), Gaps = 41/185 (22%)
Query: 35 GTAGHDLRKGHRKQLEDTGSP-APTIRAHTRRKALGPGERGPEASPRP-------APRAR 86
G G+D KG D G+P AP + + + PGERG P P P+
Sbjct: 701 GAPGNDGAKG------DAGAPGAPGSQGAPGLQGM-PGERGAAGLPGPKGDRGDAGPKGA 753
Query: 87 AHAHSR---RLPASPTGPPETRARLAWAPRFLPTNGRRPSPPRPPMSAPTPPLGKSEPGE 143
+ + R P GPP A AP +G PS P P A P + EPG
Sbjct: 754 DGSPGKDGVRGLTGPIGPPGP----AGAPGDKGESG--PSGPAGPTGARGAPGDRGEPGP 807
Query: 144 PETSGPRAYLRDPGA------------SAALRKVLATGPAQPTSP--RLVFAWSRGARRE 189
P GP + PGA + A GPA P P + + GA+
Sbjct: 808 P---GPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGA 864
Query: 190 RSSRG 194
R S G
Sbjct: 865 RGSAG 869
Score = 35.4 bits (80), Expect = 0.035
Identities = 38/115 (33%), Positives = 43/115 (37%), Gaps = 25/115 (21%)
Query: 43 KGHRKQLEDTGSPAPTIRAHTRRKALGPGERGPEASPRPA----PRARAHAHSRR----L 94
KGHR G P P PGE+GP + PA P A A + L
Sbjct: 1108 KGHRGFSGLQGPPGPPG---------SPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGL 1158
Query: 95 PASPTGPPETRARLAWA-PRFLPTNGRRPSPPRPPMSA------PTPPLGKSEPG 142
P P GPP R R A P P P PP PP + P PP K+ G
Sbjct: 1159 PG-PIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSAGFDFSFLPQPPQEKAHDG 1212
Score = 34.3 bits (77), Expect = 0.077
Identities = 42/165 (25%), Positives = 57/165 (34%), Gaps = 13/165 (7%)
Query: 35 GTAGHDLRKGHRKQLEDTGSPAPTIRAHTRRKALGPGERGPEASPRPA-PRARAHAHSRR 93
G G + G + D G+P P+ R + PGERG + P PA PR A
Sbjct: 650 GPPGEAGKPGEQGVPGDLGAPGPS---GARGERGFPGERGVQGPPGPAGPRGANGAPGND 706
Query: 94 LPASPTGPPETRARLAWAPRFLPTNGRRPSP----PRPPMSAPTPPLGKSEPGEPETSGP 149
G P AP G R + P+ P PG+ G
Sbjct: 707 GAKGDAGAPGAPGSQG-APGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGL 765
Query: 150 RAYLRDPGASAALRKVLATGPAQPTSPRLVFAWSRGARRERSSRG 194
+ PG + A +GP+ P P +RGA +R G
Sbjct: 766 TGPIGPPGPAGAPGDKGESGPSGPAGP----TGARGAPGDRGEPG 806
Score = 30.0 bits (66), Expect = 1.5
Identities = 38/129 (29%), Positives = 43/129 (33%), Gaps = 26/129 (20%)
Query: 53 GSPAPTIRAHTRRKALGP-GERGPEASPRPA-PRARAHAHSRRLPASPTGPPETRARLAW 110
GS +PT + T + GP G+ GP PA P R + P GPP
Sbjct: 98 GSESPTDQETTGVE--GPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGL 155
Query: 111 APRFLP----------TNGRR---PSPPRPPMSAPTPPLGKS---------EPGEPETSG 148
F P T G P P P P PP EPGEP SG
Sbjct: 156 GGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASG 215
Query: 149 PRAYLRDPG 157
P PG
Sbjct: 216 PMGPRGPPG 224
Score = 29.6 bits (65), Expect = 1.9
Identities = 38/148 (25%), Positives = 46/148 (31%), Gaps = 37/148 (25%)
Query: 35 GTAGHDLRKGHRKQLEDTGSPAPTIRAHTRRKALGPGERGPEASPRP-----APRARAHA 89
G G D + G + + D G+ + A PG GP P P AP A+ A
Sbjct: 815 GPPGADGQPGAKGEPGDAGA---------KGDAGPPGPAGPAGPPGPIGNVGAPGAKG-A 864
Query: 90 HSRRLPASPTGPPETRARLAWAPRFLPTNGRRPSPPRPP--------------------M 129
P TG P R+ P N P PP P +
Sbjct: 865 RGSAGPPGATGFPGAAGRVG--PPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEV 922
Query: 130 SAPTPPLGKSEPGEPETSGPRAYLRDPG 157
P PP E G P GP PG
Sbjct: 923 GPPGPPGPAGEKGSPGADGPAGAPGTPG 950
Score = 28.1 bits (61), Expect = 5.5
Identities = 32/124 (25%), Positives = 42/124 (33%), Gaps = 14/124 (11%)
Query: 51 DTGSPAPTIRAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAW 110
D G P+ A PG+RG P PA A + P + P + A+
Sbjct: 780 DKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQ-PGAKGEPGDAGAKGDA 838
Query: 111 APRFLPTNGRRPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLATGP 170
P P P P + P P+G G P G R PGA+ GP
Sbjct: 839 GP---------PGPAGP--AGPPGPIGNV--GAPGAKGARGSAGPPGATGFPGAAGRVGP 885
Query: 171 AQPT 174
P+
Sbjct: 886 PGPS 889
Score = 27.7 bits (60), Expect = 7.2
Identities = 32/113 (28%), Positives = 42/113 (37%), Gaps = 23/113 (20%)
Query: 70 PGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRPSPPRPPM 129
PGERGP P P+ +R LP + G P + ++ + + P P
Sbjct: 241 PGERGP-----PGPQG-----ARGLPGT-AGLPGMKGHRGFSGL---DGAKGDAGPAGPK 286
Query: 130 SAPTPPLGKSEPGEPETSGPRAYLRD------PGASAALRKVLATGPAQPTSP 176
P P E G P GPR + PG + A ATG A P P
Sbjct: 287 GEPGSP---GENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGP 336
>gi|169207534 PREDICTED: hypothetical protein [Homo sapiens]
Length = 183
Score = 45.1 bits (105), Expect = 4e-05
Identities = 44/146 (30%), Positives = 55/146 (37%), Gaps = 24/146 (16%)
Query: 60 RAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPT--------GPPETRARLAWA 111
R+H R ++ G +A P PR A + R+P +PT GPP TR +
Sbjct: 3 RSHPRIRSFGAAWPEEKADLSPRPRFLA---TPRVPGTPTSQLPPRIPGPPTTR-QPPRV 58
Query: 112 PRFLPTNGRRPSPPRPPMSAPTPPLGKSEPGEPETS------------GPRAYLRDPGAS 159
P L + R SP RP S P + P P S GP + P S
Sbjct: 59 PDHLHLSCPRASPDRPRPSCPLASPDRRRPAIPRASPDRPRPISPAPPGPPTSRQPPRIS 118
Query: 160 AALRKVLATGPAQPTSPRLVFAWSRG 185
A VL P PT R V RG
Sbjct: 119 VAAAPVLPAPPRPPTQRRCVPVAQRG 144
>gi|50511941 EMI domain containing 1 [Homo sapiens]
Length = 443
Score = 45.1 bits (105), Expect = 4e-05
Identities = 53/183 (28%), Positives = 62/183 (33%), Gaps = 25/183 (13%)
Query: 35 GTAGHDLRKGHRKQLEDTGSPAPTIRAHT--RRKALG-PGERGPEASPRPAPRARAHAHS 91
G G G R + G P P + R A+G PGERGP P P
Sbjct: 205 GPTGPKGDAGSRGPMGMRGPPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPGPPG----- 259
Query: 92 RRLPASPTGPPETRARLAWAP----RFLPTNGRRPS----PPRPP--MSAPTPPLGKSEP 141
P +P GPP R P F TN P PP PP M P PP P
Sbjct: 260 ---PPAPVGPPHARISQHGDPLLSNTFTETNNHWPQGPTGPPGPPGPMGPPGPPGPTGVP 316
Query: 142 GEPETSGPRAYLRDPGASAALRKVLATGPAQPTSPRLVFAWSRGARRERSSRGGIFARPR 201
G P GP G S + G P+ S G R E +G +
Sbjct: 317 GSPGHIGPPGPTGPKGISGHPGEKGERGLRGEPGPQ----GSAGQRGEPGPKGDPGEKSH 372
Query: 202 WGK 204
WG+
Sbjct: 373 WGE 375
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 44.7 bits (104), Expect = 6e-05
Identities = 38/105 (36%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 50 EDTGSPAPTIRAHTRR----KALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETR 105
E GS AP + +R A+GPG P P PAP+++A A P P R
Sbjct: 95 ERGGSRAPEVSDARKRCFALGAVGPGLPTPPPPPPPAPQSQAPGGPE---AQPFREPGLR 151
Query: 106 AR-LAWAPRFLPTNGRRPSPPRPPMSA--PTPPLGKSEPGEPETS 147
R L AP P P+PP PP S P PP + PGE S
Sbjct: 152 PRILLCAPPARPAPSAPPAPPAPPESTVRPAPP---TRPGESSYS 193
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 43.9 bits (102), Expect = 1e-04
Identities = 47/186 (25%), Positives = 66/186 (35%), Gaps = 28/186 (15%)
Query: 11 KGESELGRKDAKATETRESAVQRQGTAGHDLRKGHRKQLEDTGSPAPTIRAHT------R 64
+ S+ G + E + + + G G R + + SP+P R R
Sbjct: 491 QSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSR----SASPSPRKRQKETSPRGRR 546
Query: 65 RKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRPSP 124
R++ P SP PAP R P T P R R R+ P RR SP
Sbjct: 547 RRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSP 606
Query: 125 PRPP----MSAPTPPLGKSEPGEP------------ETSGPRAYLRDPGASAALRKVLAT 168
PP S P PP ++ P P + S P R P S+ RK +
Sbjct: 607 SPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRK--GS 664
Query: 169 GPAQPT 174
P++ T
Sbjct: 665 SPSRST 670
Score = 41.2 bits (95), Expect = 6e-04
Identities = 40/150 (26%), Positives = 58/150 (38%), Gaps = 16/150 (10%)
Query: 9 PHKGESELGRKDAKATETRESAVQRQGTAGHDLRKGHRKQLEDTGSPAPTIRAHTRRKAL 68
P K E +D +VQ++ R+ +++ D+GS + + +R +
Sbjct: 457 PRKVELSESEEDKGGKMAAADSVQQR----RQYRRQNQQSSSDSGSSSSSEDERPKRSHV 512
Query: 69 GPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRR-PSPPRP 127
GE G P+ A R+ SP G R +P PT RR PSP P
Sbjct: 513 KNGEVGRRRRHSPSRSASPSPRKRQKETSPRG------RRRRSPSPPPTRRRRSPSPAPP 566
Query: 128 PMS--APTPPLGKSEPGEP---ETSGPRAY 152
P PTPP + P P + PR Y
Sbjct: 567 PRRRRTPTPPPRRRTPSPPPRRRSPSPRRY 596
Score = 32.7 bits (73), Expect = 0.22
Identities = 32/142 (22%), Positives = 52/142 (36%), Gaps = 7/142 (4%)
Query: 19 KDAKATETRESAVQRQGTAGHDLRKGHRKQLEDTGSPAPTIRAHTRRKALGPGERGPEAS 78
KD + E +ES+ +++ + R+ R S +P R R + P R S
Sbjct: 151 KDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRS-SPVRRERKRSHSRSPRHRTKSRS 209
Query: 79 PRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRPSP-PRPPMSAPTPPLG 137
P PAP + P+ P + + + + P P P P P+P
Sbjct: 210 PSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDIL-----KVPKPEPIPEPKEPSPEKN 264
Query: 138 KSEPGEPETSGPRAYLRDPGAS 159
+ E E + PR+ R S
Sbjct: 265 SKKEKEKEKTRPRSRSRSKSRS 286
Score = 32.3 bits (72), Expect = 0.29
Identities = 36/147 (24%), Positives = 57/147 (38%), Gaps = 18/147 (12%)
Query: 42 RKGHR--KQLEDTGSPAPTIRAHTRRKALGPGERGPEASPRPAP--RARAHAHSRRLPAS 97
RKG + + SP P +R + P R P+ S P P R + + RR S
Sbjct: 661 RKGSSPSRSTREARSPQPN-----KRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPS 715
Query: 98 PTGPPETRARLAWAPRFL-------PTNGRRPSPPRPPMSAPTPPLGKSEPGEPETSGPR 150
P+ P R P+ + P + RR S R +P P K P P +
Sbjct: 716 PSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSP-EPAAKKPPAPPSPVQSQ 774
Query: 151 AYLRDPGASAALRKVLATGPAQPTSPR 177
+ + + ++K + P+ P+ PR
Sbjct: 775 SPSTNWSPAVPVKKAKSPTPS-PSPPR 800
Score = 30.4 bits (67), Expect = 1.1
Identities = 40/164 (24%), Positives = 62/164 (37%), Gaps = 19/164 (11%)
Query: 47 KQLEDTGSPAPTIRAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRA 106
K+ ++ P R+ ++ ++ PR R+R+ ++S R SP P R
Sbjct: 266 KKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRR 325
Query: 107 RLAWAPRFL---PTNGRRPSPPR----------PPMSAPTPPLGKSEPGEP--ETSGPRA 151
R PR + P + R SP R S+ + +S P +P TS P
Sbjct: 326 RT--PPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPR 383
Query: 152 YLR--DPGASAALRKVLATGPAQPTSPRLVFAWSRGARRERSSR 193
R P AS R+ + PA P + + R R SR
Sbjct: 384 KTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSR 427
Score = 29.6 bits (65), Expect = 1.9
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 19/108 (17%)
Query: 54 SPAPTIRAHTRRKALGPGERGPEASPRPAPRAR-AHAHSRRLPASPT------------- 99
SP+P + RR A P ASP P P+ R +H+ + +SP
Sbjct: 605 SPSPPPK---RRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHR 661
Query: 100 --GPPETRARLAWAPRFLPTNGRRPSPPRPPMSAPTPPLGKSEPGEPE 145
P R A +P+ + P P P S+ PP+ + P+
Sbjct: 662 KGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQ 709
>gi|56549117 dynamin 1 isoform 2 [Homo sapiens]
Length = 851
Score = 43.5 bits (101), Expect = 1e-04
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 52 TGSPAPTIRAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPT-GPPETRARLAW 110
T P P + + +++ G R P +SP P RA A +R P GPP + L
Sbjct: 752 TPMPPPVDDSWLQVQSVPAGRRSPTSSPTPQRRAPAVPPARPGSRGPAPGPPPAGSALGG 811
Query: 111 APRFLPTNGRRPSPPRPPMSAPTPPLGKSEPGEP 144
AP G P P PP P+ P ++ PG P
Sbjct: 812 APPVPSRPGASPDPFGPPPQVPSRP-NRAPPGVP 844
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 43.1 bits (100), Expect = 2e-04
Identities = 48/178 (26%), Positives = 68/178 (38%), Gaps = 36/178 (20%)
Query: 50 EDTGSPAPTIRAHTRRKALGPGERGPE-ASPRPAPRARAHAHSRRLP-------ASPTGP 101
E SPA + + T + PG P A P PAP + A H +LP + GP
Sbjct: 810 ELVSSPAASSSSATALQIQPPGSPDPPPAPPAPAPASSAPGHVAKLPQKEPVGCSKGGGP 869
Query: 102 PE---------------TRARLAWAPRFLPTNGRRPSPPRPPMSAPTPPLGKSEPGEPET 146
P R R AP PT PS P+ P+ G++ P +
Sbjct: 870 PREDVGAPLVTPSLLQMVRLRSVGAPGGAPTPALGPSAPQKPLRRALS--GRASPVPAPS 927
Query: 147 SGPRAYLRDPGASAALRKVLATG---------PAQPTSPRLV--FAWSRGARRERSSR 193
SG A +R S A + L++ P P SP F +S+G+R+ + R
Sbjct: 928 SGLHAAVRLKACSLAASEGLSSAQPNGPPEAEPRPPQSPASTASFIFSKGSRKLQLER 985
Score = 36.2 bits (82), Expect = 0.020
Identities = 40/142 (28%), Positives = 49/142 (34%), Gaps = 32/142 (22%)
Query: 46 RKQLEDTGSPAPTIRAHTRRKALGPGERG----PEASPRPA-PRARAHAHSRRLPASPTG 100
RK P T H R A+ G G PE +P PR S A+P
Sbjct: 492 RKLKRPPPPPRRTHSLHQRGLAVPDGPLGLPPKPERKQQPQLPRPPTTGGSEGAGAAPCP 551
Query: 101 PPETRARLAWAPRFLPTNGRRP-------------------SPPRPPMSAPTPPL--GKS 139
P + W P P RRP +P PP PP GK+
Sbjct: 552 PNPANS---WVPGLSPGGSRRPPRSPERTLSPSSGYSSQSGTPTLPPKGLAGPPASPGKA 608
Query: 140 EPGEPETSGPRAYLRDPGASAA 161
+P +PE LR PGAS +
Sbjct: 609 QPPKPERV---TSLRSPGASVS 627
Score = 32.0 bits (71), Expect = 0.38
Identities = 31/110 (28%), Positives = 38/110 (34%), Gaps = 16/110 (14%)
Query: 75 PEASPR-PAPRARAHAHSRRLP-------ASPTGPPETRARLAWAPRFLPTNGRRPSPPR 126
P + PR P P A A A +P ASP PP + L + + PP
Sbjct: 673 PPSKPRSPNPAAPALAAPAVVPGPVSTTDASPQSPPTPQTTLTPLQESPVISKDQSPPPS 732
Query: 127 PPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLATGPAQPTSP 176
PP S PP P T P + P AS + L P P
Sbjct: 733 PPPSYHPPP--------PPTKKPEVVVEAPSASETAEEPLQDPNWPPPPP 774
Score = 29.6 bits (65), Expect = 1.9
Identities = 41/137 (29%), Positives = 47/137 (34%), Gaps = 15/137 (10%)
Query: 77 ASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRPSPPRPPMSAP---- 132
ASP PA + S L +SP + L P P P P P SAP
Sbjct: 798 ASPEPA----GPSGSPELVSSPAASSSSATALQIQPPGSPDPPPAPPAPAPASSAPGHVA 853
Query: 133 ----TPPLGKSEPGEPETSGPRAYLRDPG--ASAALRKVLATGPAQPTSPRLVFAWSRGA 186
P+G S+ G P A L P LR V A G A PT A +
Sbjct: 854 KLPQKEPVGCSKGGGPPREDVGAPLVTPSLLQMVRLRSVGAPGGA-PTPALGPSAPQKPL 912
Query: 187 RRERSSRGGIFARPRWG 203
RR S R P G
Sbjct: 913 RRALSGRASPVPAPSSG 929
Score = 29.6 bits (65), Expect = 1.9
Identities = 35/144 (24%), Positives = 44/144 (30%), Gaps = 48/144 (33%)
Query: 53 GSPAPTIRAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPAS-----------PTGP 101
G+P P + +K L G ASP PAP + HA R S P GP
Sbjct: 897 GAPTPALGPSAPQKPLRRALSG-RASPVPAPSSGLHAAVRLKACSLAASEGLSSAQPNGP 955
Query: 102 PETRARLAWAPR----FLPTNGRR--------------------------------PSPP 125
PE R +P F+ + G R P P
Sbjct: 956 PEAEPRPPQSPASTASFIFSKGSRKLQLERPVSPETQADLQRNLVAELRSISEQRPPQAP 1015
Query: 126 RPPMSAPTPPLGKSEPGEPETSGP 149
+ AP P K G P + P
Sbjct: 1016 KKSPKAPPPVARKPSVGVPPPASP 1039
Score = 29.3 bits (64), Expect = 2.5
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 18/74 (24%)
Query: 129 MSAPTPPLGKS--EPGEPETSGPRAYLRDPGASAALRKVLATGPAQPTSPRLVFAWSRGA 186
M+A PP + EPG P GP + ++ LR+ F+W RG
Sbjct: 1 MAARAPPAAPAAEEPGNP--GGPPRRKKSRSGASGLRRA--------------FSWLRGK 44
Query: 187 RRERSSRGGIFARP 200
RR++ + G A P
Sbjct: 45 RRKKKAAGAEGAEP 58
Score = 28.1 bits (61), Expect = 5.5
Identities = 28/92 (30%), Positives = 31/92 (33%), Gaps = 14/92 (15%)
Query: 70 PGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRPSPPRPPM 129
P P P P A P SP P T L +P PSPP P
Sbjct: 685 PALAAPAVVPGPVSTTDAS------PQSPPTPQTTLTPLQESPVISKDQSPPPSPP-PSY 737
Query: 130 SAPTPPLGKSE-----PGEPETSGPRAYLRDP 156
P PP K E P ET+ L+DP
Sbjct: 738 HPPPPPTKKPEVVVEAPSASETA--EEPLQDP 767
Score = 27.7 bits (60), Expect = 7.2
Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 18/125 (14%)
Query: 53 GSPAPTIRAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAP 112
G PA +A + R P AS + + + S P+ +GP +
Sbjct: 600 GPPASPGKAQPPKPERVTSLRSPGASVSSSLTSLCSSSSDPAPSDRSGP---QILTPLGD 656
Query: 113 RF-LPTNGRRPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLATGPA 171
RF +P + + P+P PP S P P P P + P A + ++T A
Sbjct: 657 RFVIPPHPKVPAPFSPPPSKPRSP----NPAAPALAAP----------AVVPGPVSTTDA 702
Query: 172 QPTSP 176
P SP
Sbjct: 703 SPQSP 707
>gi|169214023 PREDICTED: hypothetical protein [Homo sapiens]
Length = 193
Score = 42.7 bits (99), Expect = 2e-04
Identities = 42/133 (31%), Positives = 51/133 (38%), Gaps = 12/133 (9%)
Query: 80 RPAPRARAHAHSRRLPASPT---GPPETRARLAWAPRFLPTNGRRP--SPPRPPMS-APT 133
RP+P A+ H HS L G + + + P P RP P PP S AP
Sbjct: 11 RPSPSAK-HLHSSLLQGQQRLLRGEEGSFSHELFRPAHRPGPALRPRPQPKAPPSSAAPP 69
Query: 134 PPLGKSEPGEPETSGPRAY---LRDPGASAALRKVLATGPAQPTS--PRLVFAWSRGARR 188
P P P GPR + P ++LA GPA + P L S A R
Sbjct: 70 TPHSSIPPRPPSPWGPRVWGAPTHRPALKGTEAQLLAPGPAAGSGCWPELAGTESASAER 129
Query: 189 ERSSRGGIFARPR 201
ER G RPR
Sbjct: 130 EREGGGPRSIRPR 142
>gi|169214468 PREDICTED: hypothetical protein [Homo sapiens]
Length = 193
Score = 42.7 bits (99), Expect = 2e-04
Identities = 42/133 (31%), Positives = 51/133 (38%), Gaps = 12/133 (9%)
Query: 80 RPAPRARAHAHSRRLPASPT---GPPETRARLAWAPRFLPTNGRRP--SPPRPPMS-APT 133
RP+P A+ H HS L G + + + P P RP P PP S AP
Sbjct: 11 RPSPSAK-HLHSSLLQGQQRLLRGEEGSFSHELFRPAHRPGPALRPRPQPKAPPSSAAPP 69
Query: 134 PPLGKSEPGEPETSGPRAY---LRDPGASAALRKVLATGPAQPTS--PRLVFAWSRGARR 188
P P P GPR + P ++LA GPA + P L S A R
Sbjct: 70 TPHSSIPPRPPSPWGPRVWGAPTHRPALKGTEAQLLAPGPAAGSGCWPELAGTESASAER 129
Query: 189 ERSSRGGIFARPR 201
ER G RPR
Sbjct: 130 EREGGGPRSIRPR 142
>gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1
[Homo sapiens]
Length = 1490
Score = 42.7 bits (99), Expect = 2e-04
Identities = 38/126 (30%), Positives = 53/126 (42%), Gaps = 29/126 (23%)
Query: 48 QLEDTGSPAPTIRAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRAR 107
QL T PA ++ + K GP +GP +P T P E A
Sbjct: 1216 QLMKTQEPAGSLEENNSDKNSGP--QGPRRTP-------------------TMPQEEAA- 1253
Query: 108 LAWAPRFLPTNGRRPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLA 167
A P LP R P PP PP P PPL + + +S P+ +P +AAL ++L+
Sbjct: 1254 -ACPPHILPPEKRPPEPPGPPPPPPPPPLVEGD----LSSAPQEL--NPAVTAALLQLLS 1306
Query: 168 TGPAQP 173
A+P
Sbjct: 1307 QPEAEP 1312
>gi|7710129 LIM domain only 6 [Homo sapiens]
Length = 615
Score = 42.7 bits (99), Expect = 2e-04
Identities = 41/128 (32%), Positives = 47/128 (36%), Gaps = 17/128 (13%)
Query: 67 ALGPGERGPEASPRPAPRARAHAHSRRLP--------------ASPTGPPETRARLAWAP 112
A GP R A P AP A + A + A TGP E L AP
Sbjct: 374 APGPSRRSWSAGPVTAPLAASTASFSAVKGASETTTKGTSTELAPATGPEEPSRFLRGAP 433
Query: 113 R--FLPTNGRRPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGAS-AALRKVLATG 169
+P G R P PP S P L + S PR RDP S R+ L+
Sbjct: 434 HRHSMPELGLRSVPEPPPESPGQPNLRPDDSAFGRQSTPRVSFRDPLVSEGGPRRTLSAP 493
Query: 170 PAQPTSPR 177
PAQ PR
Sbjct: 494 PAQRRRPR 501
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 42.7 bits (99), Expect = 2e-04
Identities = 48/163 (29%), Positives = 58/163 (35%), Gaps = 21/163 (12%)
Query: 53 GSPAPTIRAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASP----TGPPETRARL 108
G+PA A P P A+ PA RA A + P SP GP RA
Sbjct: 117 GAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAP 176
Query: 109 AWAPRFLPTNGRRPSPPRPPMSAPTPPLGKSEPGEPETSGPRA----------YLRDPGA 158
AP P +PP P AP P + EP P P A + P
Sbjct: 177 LAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPE 236
Query: 159 SAALRKVLATGPAQPTSPRLVFAWSRGARRERSSRGGIFARPR 201
A+R A G A+P S R V + G+ GG R R
Sbjct: 237 GGAVR---AGGAARPVSLREVVRYLGGS----GGAGGRLTRGR 272
Score = 35.8 bits (81), Expect = 0.027
Identities = 32/106 (30%), Positives = 37/106 (34%), Gaps = 2/106 (1%)
Query: 84 RARAHAHSRRLPASPTGPPET-RARLAWAPRFLPTNGRRPSPPRPPMSAPTPPLGKSEPG 142
R A R A+P PP R A A P P PP P++A P
Sbjct: 94 RNAARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAA 153
Query: 143 EPETSGPRAYLRDPGASAALRKVLATGPAQPTSPRLVFAWSRGARR 188
T+ P PG A LA P P +P V A G RR
Sbjct: 154 AAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAV-APPAGPRR 198
Score = 35.8 bits (81), Expect = 0.027
Identities = 39/129 (30%), Positives = 46/129 (35%), Gaps = 27/129 (20%)
Query: 64 RRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGP-PETRARLAWAPRFLPTNGRRP 122
RR A P P +PR AP A A A PA P P P A A APR
Sbjct: 103 RRGATPPA---PPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPR-----AAAA 154
Query: 123 SPPRPPMSAPT---------------PPLGKSEPGEPETSGPRAYLRDPGASAALRKVLA 167
+ PP P PP + P +GPR R P + A R+
Sbjct: 155 AATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPR---RAPPPAVAAREPPL 211
Query: 168 TGPAQPTSP 176
P QP +P
Sbjct: 212 PPPPQPPAP 220
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 42.4 bits (98), Expect = 3e-04
Identities = 41/134 (30%), Positives = 49/134 (36%), Gaps = 27/134 (20%)
Query: 53 GSPAPTIRAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPE-TRARLAWA 111
GSP PT +K PG PE AH P SP PP T + A
Sbjct: 1241 GSPTPT-----SKKVPLPGPGSPEVK---------RAHGTPPPVSPKPPPPPTAPKPVKA 1286
Query: 112 PRFLPTNGRRPSPPRPPMSAP---------TPPLGKSEPGEPETSGPRAY---LRDPGAS 159
LP+ PSP P P TPP + P +P + G A + P A+
Sbjct: 1287 VAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAA 1346
Query: 160 AALRKVLATGPAQP 173
AA A PA P
Sbjct: 1347 AAAAAAAAAPPAPP 1360
Score = 40.8 bits (94), Expect = 8e-04
Identities = 39/126 (30%), Positives = 49/126 (38%), Gaps = 22/126 (17%)
Query: 70 PGERGPEASPRPAPRARAHAHS----RRLPASP-TGPPETR----------ARLAWAPRF 114
P + EA P P P + + RR PAS GPPE LA P
Sbjct: 1152 PKAKEREAGPEPPPPLSVYHNGTGTVRRRPASEQAGPPELPPPPPPAEPPPTDLAHLPPL 1211
Query: 115 LPTNGRRPSPPRPPMSAPTPPLGKSEP---GEPETSGPRAYLRDPGASAALRKVLATGPA 171
P G P +PP+S P P L + P G P + + L PG+ R A G
Sbjct: 1212 PPPEGEARKPAKPPVS-PKPVLTQPVPKLQGSPTPTSKKVPLPGPGSPEVKR---AHGTP 1267
Query: 172 QPTSPR 177
P SP+
Sbjct: 1268 PPVSPK 1273
Score = 39.7 bits (91), Expect = 0.002
Identities = 32/126 (25%), Positives = 46/126 (36%), Gaps = 8/126 (6%)
Query: 55 PAPTIRAHTRRKALGPGERGPEAS-PRPAPRARAHAHSRRLPASPTGPPETRARLAWAPR 113
P P R+ A P P + P P + S+++P G PE + P
Sbjct: 1210 PLPPPEGEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPPP 1269
Query: 114 FLPTNGRRPSPPRPPMSAPTPPLGKSEPG---EPETSGPRAYLRDPGASAALRKVLATGP 170
P P+ P+P + P G + P P P A + PG + L P
Sbjct: 1270 VSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPS----LGASP 1325
Query: 171 AQPTSP 176
A+P SP
Sbjct: 1326 AKPPSP 1331
Score = 33.5 bits (75), Expect = 0.13
Identities = 46/174 (26%), Positives = 63/174 (36%), Gaps = 39/174 (22%)
Query: 5 LGESPHKGESELGRKD--------AKATETRESAVQRQGTAGHDLRK-------GHRKQL 49
LG+ P S + R A T RE+ R G GH +++ G +Q+
Sbjct: 710 LGDGPPGPSSPMSRSQEYLLDEGPAPGTPPREA---RPGRHGHSIKRASVPPVPGKPRQV 766
Query: 50 EDTGSP------APTIRAHTRRKALGPGERGPE---ASPRPAPRARAHAHSRRLPASPTG 100
G+ PT +ALG G GP A +P P+ P S
Sbjct: 767 LPPGTSHFTPPQTPTKTRPGSPQALG-GPHGPAPATAKVKPTPQLLPPTERPMSPRSLPQ 825
Query: 101 PPETRARLAWAPRFLPTNGR------RPSPPRPPMSAPT---PPLGKSEPGEPE 145
P R P+ P G P+PP P + PT PP +EPG P+
Sbjct: 826 SPTHRGFAYVLPQ--PVEGEVGPAAPGPAPPPVPTAVPTLCLPPEADAEPGRPK 877
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 42.4 bits (98), Expect = 3e-04
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 23/133 (17%)
Query: 67 ALGPGERGPEASPR-----PAP-RARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGR 120
+LGP E+G ++ R P P R+ + R P++P PP T + A R LPT +
Sbjct: 3776 SLGPKEKGESSTKRKKGQVPGPARSESVGSFGRAPSAPDKPPRTPRKQATPSRVLPTKPK 3835
Query: 121 RPS--PPRPPMSAPTPPLGKSEPGEPETSG--------PRAYLRDPGASAALRKVLATGP 170
S PRPP S K+EPG + R LR P A V P
Sbjct: 3836 PNSQNKPRPPPSEQR----KAEPGHTQRKDRLGKAFPQGRPLLRPPKRGTA---VHGAEP 3888
Query: 171 AQPTSPRLVFAWS 183
A+P + R A S
Sbjct: 3889 AEPHTHRTAEAQS 3901
Score = 30.0 bits (66), Expect = 1.5
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 18/111 (16%)
Query: 53 GSPAPTIRA--HTRRKALGPGE--RGPEASPRPAPRARAHAHSRRLPASPTGPPETRARL 108
G+P PT+ R+ A PG + P PA R A A PE + R
Sbjct: 8 GAPPPTMTGDLQPRQVASSPGHPSQPPLEDNTPATRTTKGAREAGGQAQAMELPEAQPRQ 67
Query: 109 AWAPRFLP----------TNGRRPSPPRPP----MSAPTPPLGKSEPGEPE 145
A P T G+R SP PP + AP+ G++E P+
Sbjct: 68 ARDGELKPPSLRGQAPSSTPGKRGSPQTPPGRSPLQAPSRLAGRAEGSPPQ 118
Score = 29.6 bits (65), Expect = 1.9
Identities = 37/137 (27%), Positives = 46/137 (33%), Gaps = 20/137 (14%)
Query: 69 GPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRPSPPRPP 128
GPG P P A+ A PP + + P+ RP P PP
Sbjct: 155 GPGTGAPLRPGLPRTEAQPAAEELGFHRCFQEPPSSFTSTNYTS---PSATPRPPAPGPP 211
Query: 129 MSAPTPPLGKSEPGEPETSG-----PRAYLRDPGASAALRKVLATGPAQPTSPRLVFAWS 183
S T PL E + SG P A PGA+ PA+P
Sbjct: 212 QSRGTSPLQPGSYPEYQASGADSWPPAAENSFPGAN------FGVPPAEPE------PIP 259
Query: 184 RGARRERSSRGGIFARP 200
+G+R S RG F P
Sbjct: 260 KGSRPGGSPRGVSFQFP 276
Score = 29.6 bits (65), Expect = 1.9
Identities = 24/89 (26%), Positives = 30/89 (33%)
Query: 61 AHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGR 120
A T ++AL GE G + P L PTG AR W PR G
Sbjct: 2679 AETDQEALCAGETGAQKPPGDRMLCPGRMDGAALGEQPTGQKGASARGFWGPRETKALGV 2738
Query: 121 RPSPPRPPMSAPTPPLGKSEPGEPETSGP 149
P + +SE G E + P
Sbjct: 2739 CKESGSEPAEDSSRAHSRSEEGVWEENTP 2767
Score = 27.7 bits (60), Expect = 7.2
Identities = 34/130 (26%), Positives = 47/130 (36%), Gaps = 10/130 (7%)
Query: 53 GSPAPTIRAHTRRKALGPG----ERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARL 108
GS AP A + P + GP + +PR P +G ++
Sbjct: 3676 GSLAPGELARGTENGMKPATPKAKPGPSSQGSGSPRPGTKTGGGSQPQPASGQLQSETAT 3735
Query: 109 AWAPRFLPTNGRRPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYL--RDPGASAALRKV- 165
A P+ R P+P R P A K P E GP L ++ G S+ RK
Sbjct: 3736 TPAKPSFPS--RSPAPERLPARAQAKSCTKG-PREAGEQGPHGSLGPKEKGESSTKRKKG 3792
Query: 166 LATGPAQPTS 175
GPA+ S
Sbjct: 3793 QVPGPARSES 3802
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 42.4 bits (98), Expect = 3e-04
Identities = 52/199 (26%), Positives = 74/199 (37%), Gaps = 16/199 (8%)
Query: 8 SPHKGESELGRKDAKA-TETRESAVQRQGTAGHDLRKGHRKQLEDTGSPAPTIRAHTRRK 66
SP + D+KA T T R G++ K +P ++ R
Sbjct: 1552 SPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPR-- 1609
Query: 67 ALGPGERGPEASPRP---APRA-----RAHAHSRRLPASPTGPPETRARLAWAPRFLPTN 118
A + G ++SP P APRA R+ + S+ SP G T + P+
Sbjct: 1610 AAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTAR 1669
Query: 119 GRRPSPPRPPMSAPTPPLGKSEPGEPE-TSGPRAYLRDPGASAALRKVLATGPAQPTSPR 177
S P P + TPP +S PE T R R AS++ T P SP
Sbjct: 1670 RGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPS 1729
Query: 178 L----VFAWSRGARRERSS 192
+ SR +RR RS+
Sbjct: 1730 VSSPEPAEKSRSSRRRRSA 1748
Score = 33.9 bits (76), Expect = 0.10
Identities = 37/128 (28%), Positives = 51/128 (39%), Gaps = 13/128 (10%)
Query: 28 ESAVQRQGTAGHDLRKGHRKQLEDT----GSPAPTIRAHTRRKALGPGERGPEASPRPAP 83
ES+ R+ +K HR + E SP P + ++ K +R S PAP
Sbjct: 201 ESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDK-----KRKRSRSTTPAP 255
Query: 84 RA-RAHAHSRRLPASPTGPPETRARLAWAPRFLPT-NGRRPSPPRPPMSAPTPPLGKSEP 141
++ RAH + AS + +R+R A A GR PSP P SEP
Sbjct: 256 KSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGDAPF--SEP 313
Query: 142 GEPETSGP 149
G T P
Sbjct: 314 GTTSTQRP 321
Score = 32.7 bits (73), Expect = 0.22
Identities = 53/226 (23%), Positives = 81/226 (35%), Gaps = 41/226 (18%)
Query: 3 QGLGESPHKGESELGRKDAKATETRESAVQRQGTAGHDLRKGHRKQLEDTGSPAPTIRAH 62
+G G++P SE G + + E+A ++ + D K +++ SP+P
Sbjct: 303 RGEGDAPF---SEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSP----- 354
Query: 63 TRRKALGPGERGPE--------ASPRPA------------PRARAHAHSRRLPASPTGPP 102
R + GP P SP+P P + R P SP P
Sbjct: 355 -ERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLP 413
Query: 103 ETRARLAWAPRFLPTNGRR--PSPPRPPMSAPTPPLGK---SEPGEPETSGPRAYLRDPG 157
++ + + P PT R S P P AP P + S P S RA RD
Sbjct: 414 QSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRA-KRDKS 472
Query: 158 ASAALRKVLATGPAQPTSPRLVFAWSRGARRERSSRGGIFAR-PRW 202
S + + + T+ R R R + RG +R P+W
Sbjct: 473 HSHTPSRRMGRSRSPATAKR-----GRSRSRTPTKRGHSRSRSPQW 513
Score = 30.0 bits (66), Expect = 1.5
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 70 PGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRPSPPRPP 128
P + GP+A P+PA + RR SP P ++ R + + + P RRPSP P
Sbjct: 2651 PAKPGPQALPKPASPKKPPPGERR-SRSPRKPIDS-LRDSRSLSYSPVERRRPSPQPSP 2707
Score = 29.3 bits (64), Expect = 2.5
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 8/110 (7%)
Query: 50 EDTGSPAPTIRAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLA 109
E + S +PT + ++K G R +SPR R R + ++ S + E++ R
Sbjct: 176 ESSSSRSPTPKQKKKKKKKDRGRRSESSSPR---RERKKSSKKKKHRSES---ESKKRKH 229
Query: 110 WAPRFLPTNGRRPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGAS 159
+P P + R+ + S T P KS TS A D S
Sbjct: 230 RSP--TPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRS 277
Score = 29.3 bits (64), Expect = 2.5
Identities = 41/186 (22%), Positives = 66/186 (35%), Gaps = 10/186 (5%)
Query: 6 GESPHKGESELGRKDAKATETRESAVQRQGTAGHDLRKGHRKQLEDTGSPAPTIRAHTRR 65
G SP L R +++ + +R+ +G R+Q + S TRR
Sbjct: 1760 GRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRV------TRR 1813
Query: 66 KALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRPSPP 125
+ G G + + + R + R PT +R+R + AP + R SP
Sbjct: 1814 RRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAP--WKRSRSRASPA 1871
Query: 126 RPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLATGPAQPTSPRLVFAWSRG 185
S PL TS P + R ++ R+ + A P S R + +
Sbjct: 1872 THRRSRSRTPLISRRRSRSRTS-PVSRRRSRSRTSVTRR-RSRSRASPVSRRRSRSRTPP 1929
Query: 186 ARRERS 191
R RS
Sbjct: 1930 VTRRRS 1935
Score = 28.9 bits (63), Expect = 3.2
Identities = 34/144 (23%), Positives = 54/144 (37%), Gaps = 24/144 (16%)
Query: 46 RKQLEDTGSPAPTIRAHTRRKALGPGERGPEASPRPAP----------RARA-----HAH 90
R+ + SP P ++A + P +R S P+P R+R+ +
Sbjct: 906 RQSPSRSSSPQPKVKA-----IISPRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVE 960
Query: 91 SRRLPA---SPTGPPETRARLAWAPRFLPTNGRRPSPPRPPMSAPTPPL-GKSEPGEPET 146
SR LP S + P+T+ + PR + P P + P P L G P E
Sbjct: 961 SRLLPRYSHSGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQTPPGPSLSGSKSPCPQEK 1020
Query: 147 SGPRAYLRDPGASAALRKVLATGP 170
S PG+ + V ++ P
Sbjct: 1021 SKDSLVQSCPGSLSLCAGVKSSTP 1044
Score = 27.3 bits (59), Expect = 9.4
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 14/82 (17%)
Query: 54 SPAPTIRAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPR 113
SP P ++ T + G P+A R P RR +S + PP+ +++
Sbjct: 783 SPCPKQKSQTPPRRSRSGSSQPKAKSRTPP--------RRSRSSSSPPPKQKSKTP---- 830
Query: 114 FLPTNGRRPSPPRPPMSAPTPP 135
S P P + + TPP
Sbjct: 831 --SRQSHSSSSPHPKVKSGTPP 850
Score = 27.3 bits (59), Expect = 9.4
Identities = 30/119 (25%), Positives = 41/119 (34%), Gaps = 4/119 (3%)
Query: 63 TRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRP 122
TR E P+A + + S L A P P R+ A +P R P
Sbjct: 1376 TRSSGHSSSELSPDAVEKAGMSSNQSISSPVLDAVPRTPSRERSSSASSPEMKDGLPRTP 1435
Query: 123 SPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRD-PGASAALRKVLATGP---AQPTSPR 177
S S+P G P SG ++D P + R + P A P +PR
Sbjct: 1436 SRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKALPQTPR 1494
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 42.0 bits (97), Expect = 4e-04
Identities = 40/132 (30%), Positives = 51/132 (38%), Gaps = 40/132 (30%)
Query: 27 RESAVQRQG--TAGHDLRKGHRKQLEDTGSPAPTIRAHTRRKALGPGERGPEASPRPAPR 84
RE+A +R G AG D K G+P RA R ++ R P +P+PAPR
Sbjct: 603 REAAYKRFGYKLAGMDPEK--------PGTPIVLRRAQPRARSSNDARRPP--APQPAPR 652
Query: 85 ARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRPSPPRPPMSA--PTPPLGKSEPG 142
+H W+ P P PPRPP S P PPL + G
Sbjct: 653 TLSH---------------------WSALLSP-----PVPPRPPSSGPPPAPPLSPALSG 686
Query: 143 EPETSGPRAYLR 154
P + P LR
Sbjct: 687 LPRPASPYGSLR 698
Score = 37.7 bits (86), Expect = 0.007
Identities = 40/137 (29%), Positives = 47/137 (34%), Gaps = 17/137 (12%)
Query: 55 PAPTIR--AHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPAS--PTGPPETRARLAW 110
PAP A A+ P E P+ P PR RR A P P R AW
Sbjct: 712 PAPQASWWAFVEPPAVSP-EVPPDLLAFPGPRPSFRGSRRRGAAFGFPGASPRASRRRAW 770
Query: 111 APRFLPTNGRRPS----------PPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGASA 160
+P P R S PP P +S T P P P PR+ P
Sbjct: 771 SPLASPQPSLRSSPGLGYCSPLAPPSPQLSLRTGPF--QPPFLPPARRPRSLQESPAPRR 828
Query: 161 ALRKVLATGPAQPTSPR 177
A ++ G P SPR
Sbjct: 829 AAGRLGPPGSPLPGSPR 845
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 42.0 bits (97), Expect = 4e-04
Identities = 31/105 (29%), Positives = 35/105 (33%), Gaps = 1/105 (0%)
Query: 55 PAPTIRAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRF 114
P P I +G G G P P P H P P P L P
Sbjct: 326 PPPMIGIPPPPPPVGFGSPGTPPPPSP-PSFPPHPDFAAPPPPPPPPAADYPTLPPPPLS 384
Query: 115 LPTNGRRPSPPRPPMSAPTPPLGKSEPGEPETSGPRAYLRDPGAS 159
PT G P PP PP P PP G+P P + P +S
Sbjct: 385 QPTGGAPPPPPPPPPPGPPPPPFTGADGQPAIPPPLSDTTKPKSS 429
Score = 40.8 bits (94), Expect = 8e-04
Identities = 35/114 (30%), Positives = 43/114 (37%), Gaps = 17/114 (14%)
Query: 50 EDTGSPAPTIRAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLA 109
ED P P ++ G G GP+ S +P S PA P G P
Sbjct: 264 EDNLPPPPAEFSYPVDNQRGSGLAGPKRSSVVSP-------SHPPPAPPLGSPPGPK--- 313
Query: 110 WAPRFLPTNGRRPSPPRPPMSA---PTPPLGKSEPGEPETSGPRAYLRDPGASA 160
P F P P PP PPM P PP+G PG P P ++ P +A
Sbjct: 314 --PGFAPPPA--PPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAA 363
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 42.0 bits (97), Expect = 4e-04
Identities = 38/142 (26%), Positives = 52/142 (36%), Gaps = 23/142 (16%)
Query: 44 GHRKQLEDTGSPA---PTIRAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTG 100
G + + G PA P + + GP +GP RP P+ + H S G
Sbjct: 445 GRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQH-------LSGLG 497
Query: 101 PPETRARLAWAPRFLPTNGRRPSPPRPPMSAPTPPLGKSE------PGEPETSGPRAY-- 152
PP P+ LP+ P P + PT G+ PG P + P A
Sbjct: 498 PPAGSP----LPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPS 553
Query: 153 -LRDPGASAALRKVLATGPAQP 173
R G A R+ +GPA P
Sbjct: 554 PQRQAGPPQATRQTSVSGPAPP 575
Score = 36.2 bits (82), Expect = 0.020
Identities = 37/123 (30%), Positives = 51/123 (41%), Gaps = 18/123 (14%)
Query: 63 TRRKALGPGE---RGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNG 119
+R A GPG P ASP P +A +R+ S PP + + AP P
Sbjct: 533 SRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPP----KASGAP---PGGQ 585
Query: 120 RRPSPPRPP--MSAPTPPLGKSEP----GEPETSGPRAYLRDPGASAALRKVLATGPAQP 173
+R PP+ P + PT ++ P G P T PR PG + + LA P+Q
Sbjct: 586 QRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRP--SGPGPAGRPKPQLAQKPSQD 643
Query: 174 TSP 176
P
Sbjct: 644 VPP 646
Score = 33.1 bits (74), Expect = 0.17
Identities = 35/124 (28%), Positives = 48/124 (38%), Gaps = 20/124 (16%)
Query: 54 SPAPTIRA---HTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAW 110
SP+P +A R+ G P+AS P P + + P P GP ++
Sbjct: 551 SPSPQRQAGPPQATRQTSVSGPAPPKASGAP-PGGQQRQGPPQKPPGPAGPTRQASQAGP 609
Query: 111 APRFLPTNGRRPSPPRP-PMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLATG 169
PR P ++P P P P P P L + +P P P A+AA A G
Sbjct: 610 VPRTGPPTTQQPRPSGPGPAGRPKPQLAQ----KPSQDVP------PPATAA-----AGG 654
Query: 170 PAQP 173
P P
Sbjct: 655 PPHP 658
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 42.0 bits (97), Expect = 4e-04
Identities = 38/142 (26%), Positives = 52/142 (36%), Gaps = 23/142 (16%)
Query: 44 GHRKQLEDTGSPA---PTIRAHTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTG 100
G + + G PA P + + GP +GP RP P+ + H S G
Sbjct: 445 GRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQH-------LSGLG 497
Query: 101 PPETRARLAWAPRFLPTNGRRPSPPRPPMSAPTPPLGKSE------PGEPETSGPRAY-- 152
PP P+ LP+ P P + PT G+ PG P + P A
Sbjct: 498 PPAGSP----LPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPS 553
Query: 153 -LRDPGASAALRKVLATGPAQP 173
R G A R+ +GPA P
Sbjct: 554 PQRQAGPPQATRQTSVSGPAPP 575
Score = 36.2 bits (82), Expect = 0.020
Identities = 37/123 (30%), Positives = 51/123 (41%), Gaps = 18/123 (14%)
Query: 63 TRRKALGPGE---RGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNG 119
+R A GPG P ASP P +A +R+ S PP + + AP P
Sbjct: 533 SRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPP----KASGAP---PGGQ 585
Query: 120 RRPSPPRPP--MSAPTPPLGKSEP----GEPETSGPRAYLRDPGASAALRKVLATGPAQP 173
+R PP+ P + PT ++ P G P T PR PG + + LA P+Q
Sbjct: 586 QRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRP--SGPGPAGRPKPQLAQKPSQD 643
Query: 174 TSP 176
P
Sbjct: 644 VPP 646
Score = 33.1 bits (74), Expect = 0.17
Identities = 35/124 (28%), Positives = 48/124 (38%), Gaps = 20/124 (16%)
Query: 54 SPAPTIRA---HTRRKALGPGERGPEASPRPAPRARAHAHSRRLPASPTGPPETRARLAW 110
SP+P +A R+ G P+AS P P + + P P GP ++
Sbjct: 551 SPSPQRQAGPPQATRQTSVSGPAPPKASGAP-PGGQQRQGPPQKPPGPAGPTRQASQAGP 609
Query: 111 APRFLPTNGRRPSPPRP-PMSAPTPPLGKSEPGEPETSGPRAYLRDPGASAALRKVLATG 169
PR P ++P P P P P P L + +P P P A+AA A G
Sbjct: 610 VPRTGPPTTQQPRPSGPGPAGRPKPQLAQ----KPSQDVP------PPATAA-----AGG 654
Query: 170 PAQP 173
P P
Sbjct: 655 PPHP 658
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.131 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,942,402
Number of Sequences: 37866
Number of extensions: 859420
Number of successful extensions: 10792
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 359
Number of HSP's successfully gapped in prelim test: 1420
Number of HSP's that attempted gapping in prelim test: 5924
Number of HSP's gapped (non-prelim): 4609
length of query: 208
length of database: 18,247,518
effective HSP length: 98
effective length of query: 110
effective length of database: 14,536,650
effective search space: 1599031500
effective search space used: 1599031500
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.