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Search of human proteins with 239756720
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756720 PREDICTED: hypothetical protein XP_002345024 [Homo
sapiens]
(303 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756720 PREDICTED: hypothetical protein XP_002345024 [Homo ... 627 e-180
gi|239751215 PREDICTED: hypothetical protein XP_002347750 [Homo ... 627 e-180
gi|239745705 PREDICTED: hypothetical protein XP_002343521 [Homo ... 625 e-179
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 39 0.004
gi|169214712 PREDICTED: hypothetical protein [Homo sapiens] 38 0.010
gi|113428936 PREDICTED: hypothetical protein [Homo sapiens] 38 0.010
gi|91208420 bassoon protein [Homo sapiens] 38 0.010
gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens] 38 0.010
gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain... 38 0.010
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 37 0.017
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 37 0.028
gi|148762940 DVL-binding protein DAPLE [Homo sapiens] 36 0.037
gi|113428809 PREDICTED: hypothetical protein [Homo sapiens] 36 0.048
gi|25121980 dispatched B [Homo sapiens] 36 0.048
gi|169217315 PREDICTED: hypothetical protein [Homo sapiens] 34 0.14
gi|113430659 PREDICTED: hypothetical protein [Homo sapiens] 34 0.14
gi|113430177 PREDICTED: hypothetical protein [Homo sapiens] 34 0.14
gi|113430175 PREDICTED: hypothetical protein [Homo sapiens] 34 0.14
gi|19924099 synapsin I isoform Ia [Homo sapiens] 34 0.14
gi|19924097 synapsin I isoform Ib [Homo sapiens] 34 0.14
gi|239755589 PREDICTED: hypothetical protein [Homo sapiens] 34 0.18
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 34 0.18
gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens] 34 0.18
gi|169160624 PREDICTED: hypothetical protein [Homo sapiens] 33 0.24
gi|113412136 PREDICTED: hypothetical protein [Homo sapiens] 33 0.24
gi|113408483 PREDICTED: hypothetical protein [Homo sapiens] 33 0.24
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 33 0.31
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 33 0.31
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 33 0.31
gi|145580575 C-terminal binding protein 2 isoform 2 [Homo sapiens] 33 0.31
>gi|239756720 PREDICTED: hypothetical protein XP_002345024 [Homo
sapiens]
Length = 303
Score = 627 bits (1618), Expect = e-180
Identities = 303/303 (100%), Positives = 303/303 (100%)
Query: 1 MLVCVGSEIYKDLKLRNSDRERCISDLHTCNIMKKGESREASGNASHTVMTHRHTEREEP 60
MLVCVGSEIYKDLKLRNSDRERCISDLHTCNIMKKGESREASGNASHTVMTHRHTEREEP
Sbjct: 1 MLVCVGSEIYKDLKLRNSDRERCISDLHTCNIMKKGESREASGNASHTVMTHRHTEREEP 60
Query: 61 CLGVLPQRLCSSPKSLDICSQPSEGKSLSWEHRFKGAAPGNTAVTIWWLKKLGSWRSLAL 120
CLGVLPQRLCSSPKSLDICSQPSEGKSLSWEHRFKGAAPGNTAVTIWWLKKLGSWRSLAL
Sbjct: 61 CLGVLPQRLCSSPKSLDICSQPSEGKSLSWEHRFKGAAPGNTAVTIWWLKKLGSWRSLAL 120
Query: 121 AVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPH 180
AVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPH
Sbjct: 121 AVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPH 180
Query: 181 HQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRV 240
HQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRV
Sbjct: 181 HQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRV 240
Query: 241 LRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWALTPGPAPSRLISTYRGGDR 300
LRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWALTPGPAPSRLISTYRGGDR
Sbjct: 241 LRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWALTPGPAPSRLISTYRGGDR 300
Query: 301 MAT 303
MAT
Sbjct: 301 MAT 303
>gi|239751215 PREDICTED: hypothetical protein XP_002347750 [Homo
sapiens]
Length = 303
Score = 627 bits (1618), Expect = e-180
Identities = 303/303 (100%), Positives = 303/303 (100%)
Query: 1 MLVCVGSEIYKDLKLRNSDRERCISDLHTCNIMKKGESREASGNASHTVMTHRHTEREEP 60
MLVCVGSEIYKDLKLRNSDRERCISDLHTCNIMKKGESREASGNASHTVMTHRHTEREEP
Sbjct: 1 MLVCVGSEIYKDLKLRNSDRERCISDLHTCNIMKKGESREASGNASHTVMTHRHTEREEP 60
Query: 61 CLGVLPQRLCSSPKSLDICSQPSEGKSLSWEHRFKGAAPGNTAVTIWWLKKLGSWRSLAL 120
CLGVLPQRLCSSPKSLDICSQPSEGKSLSWEHRFKGAAPGNTAVTIWWLKKLGSWRSLAL
Sbjct: 61 CLGVLPQRLCSSPKSLDICSQPSEGKSLSWEHRFKGAAPGNTAVTIWWLKKLGSWRSLAL 120
Query: 121 AVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPH 180
AVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPH
Sbjct: 121 AVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPH 180
Query: 181 HQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRV 240
HQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRV
Sbjct: 181 HQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRV 240
Query: 241 LRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWALTPGPAPSRLISTYRGGDR 300
LRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWALTPGPAPSRLISTYRGGDR
Sbjct: 241 LRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWALTPGPAPSRLISTYRGGDR 300
Query: 301 MAT 303
MAT
Sbjct: 301 MAT 303
>gi|239745705 PREDICTED: hypothetical protein XP_002343521 [Homo
sapiens]
Length = 303
Score = 625 bits (1612), Expect = e-179
Identities = 302/303 (99%), Positives = 302/303 (99%)
Query: 1 MLVCVGSEIYKDLKLRNSDRERCISDLHTCNIMKKGESREASGNASHTVMTHRHTEREEP 60
MLVCVGSEIYKDLKLRNSDRERCISDLHTCNIMKKGESREASGNASHTVMTHRHTEREEP
Sbjct: 1 MLVCVGSEIYKDLKLRNSDRERCISDLHTCNIMKKGESREASGNASHTVMTHRHTEREEP 60
Query: 61 CLGVLPQRLCSSPKSLDICSQPSEGKSLSWEHRFKGAAPGNTAVTIWWLKKLGSWRSLAL 120
CLGVLPQRLCSSPKSLDICSQPSEGKSLSWEHRFKGAAPGNTAVTIWWLKKLGSWRSLAL
Sbjct: 61 CLGVLPQRLCSSPKSLDICSQPSEGKSLSWEHRFKGAAPGNTAVTIWWLKKLGSWRSLAL 120
Query: 121 AVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPH 180
AVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPH
Sbjct: 121 AVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPH 180
Query: 181 HQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRV 240
HQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRV
Sbjct: 181 HQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRV 240
Query: 241 LRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWALTPGPAPSRLISTYRGGDR 300
LRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWA TPGPAPSRLISTYRGGDR
Sbjct: 241 LRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWARTPGPAPSRLISTYRGGDR 300
Query: 301 MAT 303
MAT
Sbjct: 301 MAT 303
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 39.3 bits (90), Expect = 0.004
Identities = 43/145 (29%), Positives = 53/145 (36%), Gaps = 20/145 (13%)
Query: 137 AEAVGPWRLG---PGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPHHQQRPRPLGSIAA 193
+ A P R G P + S S +R RS G+ APGPGP GS
Sbjct: 398 SSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEP-------GSERG 450
Query: 194 QEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRVLRRERGPLLREPH 253
G + + PRA P AHG G E +SS R GP R
Sbjct: 451 HGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSS----------SRSPGPHPRSWS 500
Query: 254 RARPPAASVSLATGTRPGLTPLLPS 278
+R P+ S S + RP PS
Sbjct: 501 SSRSPSKSRSRSAEKRPHSPSRSPS 525
>gi|169214712 PREDICTED: hypothetical protein [Homo sapiens]
Length = 235
Score = 38.1 bits (87), Expect = 0.010
Identities = 40/130 (30%), Positives = 48/130 (36%), Gaps = 16/130 (12%)
Query: 97 AAPGNTAVTIWWLKKLGSWRSLALAVLQRCRG---QVPADHCAAEAVGPWRLGP----GA 149
A AV W K G WR RC G + PA C+ P L P GA
Sbjct: 111 ALEAKAAVPPGWKKTAGGWR-------MRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGA 163
Query: 150 KEKKRLSASQARLRSHLQPGAYCQAPGP-GPHHQ-QRPRPLGSIAAQEGLEQLLRLSTPR 207
+ + +L A R H AY PGP GP +P L + LE R S+
Sbjct: 164 RPRAQLPAGSLCPRPHTTDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRN 223
Query: 208 ATLPGARSRP 217
A R RP
Sbjct: 224 AREKSGRQRP 233
>gi|113428936 PREDICTED: hypothetical protein [Homo sapiens]
Length = 235
Score = 38.1 bits (87), Expect = 0.010
Identities = 40/130 (30%), Positives = 48/130 (36%), Gaps = 16/130 (12%)
Query: 97 AAPGNTAVTIWWLKKLGSWRSLALAVLQRCRG---QVPADHCAAEAVGPWRLGP----GA 149
A AV W K G WR RC G + PA C+ P L P GA
Sbjct: 111 ALEAKAAVPPGWKKTAGGWR-------MRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGA 163
Query: 150 KEKKRLSASQARLRSHLQPGAYCQAPGP-GPHHQ-QRPRPLGSIAAQEGLEQLLRLSTPR 207
+ + +L A R H AY PGP GP +P L + LE R S+
Sbjct: 164 RPRAQLPAGSLCPRPHTTDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRN 223
Query: 208 ATLPGARSRP 217
A R RP
Sbjct: 224 AREKSGRQRP 233
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 38.1 bits (87), Expect = 0.010
Identities = 43/160 (26%), Positives = 60/160 (37%), Gaps = 15/160 (9%)
Query: 150 KEKKRLSASQARLRSHLQPGAYCQAPG----PGPHHQQRPR----PLGSIAAQ---EGLE 198
K ++ + A L+S +P A Q G PGP Q P P G+ + Q + +
Sbjct: 3723 KGSRQAHSGPAALQSKAEPQAQPQLQGRQAAPGPQQSQSPSSRQIPSGAASRQPQTQQQQ 3782
Query: 199 QLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRVLRRERGPLLREPHRARPP 258
Q L L P+ L AR + Q+ +S AG P GP P RA
Sbjct: 3783 QGLGLQPPQQALTQARLQQQSQPTTRGSAPAASQPAGKPQPGPSTATGPQPAGPPRAEQT 3842
Query: 259 AASVSLATGTRPGLTPLLPSYWALTPGPAPSRLISTYRGG 298
S A + G P PGP P+ + + R G
Sbjct: 3843 NGSKGTAKAPQQGRAPQAQP----APGPGPAGVKAGARPG 3878
Score = 28.5 bits (62), Expect = 7.7
Identities = 10/14 (71%), Positives = 11/14 (78%)
Query: 176 GPGPHHQQRPRPLG 189
GPGPH +QRP P G
Sbjct: 1962 GPGPHEEQRPYPQG 1975
>gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]
Length = 331
Score = 38.1 bits (87), Expect = 0.010
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 7/96 (7%)
Query: 141 GPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPHHQQRPRPLGSIAAQEGLEQL 200
GP G A++ K A+ A R + C+ PGP P P P A G ++
Sbjct: 63 GPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAP----APAPASVTAELPGDGRM 118
Query: 201 LRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGF 236
++LS P P A R + P +S+G+GF
Sbjct: 119 VQLSPPALAAPAAPGRALLYSLSQP---LASLGSGF 151
>gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain and
proline-rich containing [Homo sapiens]
Length = 1435
Score = 38.1 bits (87), Expect = 0.010
Identities = 50/165 (30%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 141 GPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPHHQ-QRPRPLGSIAAQE--GL 197
GP GP + K L +L + L+ + Q GPGP Q P P + + + GL
Sbjct: 1278 GPGSQGPESATWKTLGQ---QLNAELRSRGWGQQDGPGPPSPGQSPSPCRTSPSPDSLGL 1334
Query: 198 EQLLRLSTPRATLPGARSRPQAHGH--VGPQESQSSVGAGFPIRVLRRERGPLL-REPHR 254
+ L PR R RP + G V E Q A P+R+ +R P+L R P
Sbjct: 1335 PEDPCLG-PRNEDGQLRPRPLSAGRRAVSVHEDQLQAPAERPLRL---QRSPVLKRRPKL 1390
Query: 255 ARPPAASVSLATGTRP-GLTPLLPSYWALTPGPAPSRLISTYRGG 298
PP+ S+ GT P P PS +P +P + RGG
Sbjct: 1391 EAPPSPSLGSGLGTEPLPPQPTEPS----SPERSPPSPATDQRGG 1431
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23
[Homo sapiens]
Length = 1636
Score = 37.4 bits (85), Expect = 0.017
Identities = 41/151 (27%), Positives = 55/151 (36%), Gaps = 42/151 (27%)
Query: 165 HLQPGAYCQAPGPGPHHQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHG--- 221
H P + + GPGPH+ P P G+ + G QL++ PRA PG + P A G
Sbjct: 770 HFPPSPFPSSTGPGPHYLSGPLPPGTYS---GPTQLIQ---PRA--PGPHAMPVAPGPAL 821
Query: 222 --------------HVGPQE---SQSSVGAGFPIRVLRRERGPLLREPHRARPPAASVSL 264
PQ S VG G P+ P P + L
Sbjct: 822 YPAPAYTPELGLVPRSSPQHGVVSSPYVGVG--------PAPPVAGLPSAPPPQFSGPEL 873
Query: 265 ATGTRPGLTPL------LPSYWALTPGPAPS 289
A RP T + +PS+ A P P P+
Sbjct: 874 AMAVRPATTTVDSIQAPIPSHTAPRPNPTPA 904
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 36.6 bits (83), Expect = 0.028
Identities = 48/174 (27%), Positives = 57/174 (32%), Gaps = 44/174 (25%)
Query: 119 ALAVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPG 178
A+A LQ+ A VGP LG RL PG A PG
Sbjct: 726 AIATLQQAAAMSFCPQVARPLVGPLALG------------SPRLVRRPPPGPAPAAASPG 773
Query: 179 PHHQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAH--GHVGPQESQSSVGAGF 236
P P A+ PGA + P+A G + G
Sbjct: 774 P-------------------------PPPASPPGAPASPRAPRTSPYGGLPAAPLAGPAL 808
Query: 237 PIRVLRRERGPLLRE----PHRARPPAASVSLATGTRPGLTPLLPSYWALTPGP 286
P R L R PL PH A PAAS A+ + P L P P+ A P P
Sbjct: 809 PARRLSRASRPLSASQPSLPHGAPGPAASTRPASSSTPRLGP-TPAARAAAPSP 861
>gi|148762940 DVL-binding protein DAPLE [Homo sapiens]
Length = 2028
Score = 36.2 bits (82), Expect = 0.037
Identities = 64/243 (26%), Positives = 90/243 (37%), Gaps = 39/243 (16%)
Query: 53 RHTEREEPCLGVLPQRLCSSPKSLDICSQPSEGKSLSWEHRFKGAAPGNTAVTIWWLKKL 112
R TE E P V P R P+SL + +P + H AP + + ++ L
Sbjct: 1756 RLTEAEAPP-SVAP-RQAQPPQSLSL-GRPRQAPVPPASH-----APASRSASLSRAFSL 1807
Query: 113 GSWRSLALAVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKR--LSASQARLRSHL--QP 168
S L + + C+ + P A EA+G G + S S AR R+ L +
Sbjct: 1808 ASADLLRASGPEACKQESPQKLGAPEALGGRETGSHTLQSPAPPSSHSLARERTPLVGKA 1867
Query: 169 GAYCQAPGP--------------------GPHHQQRPRPL------GSIAAQEGLEQLLR 202
G+ CQ PGP P HQ P G+ AA G L
Sbjct: 1868 GSSCQGPGPRSRPLDTRRFSLAPPKEERLAPLHQSATAPAIATAGAGAAAAGSGSNSQLL 1927
Query: 203 LSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRVLRRERGPLLREPHRARPPAASV 262
+P A P AR++P+A G + + V AG + G E A+ P S
Sbjct: 1928 HFSPAAA-PAARTKPKAPPRSGEVATITPVRAGLSLSEGDGVPGQGCSEGLPAKSPGRSP 1986
Query: 263 SLA 265
LA
Sbjct: 1987 DLA 1989
>gi|113428809 PREDICTED: hypothetical protein [Homo sapiens]
Length = 235
Score = 35.8 bits (81), Expect = 0.048
Identities = 40/130 (30%), Positives = 47/130 (36%), Gaps = 16/130 (12%)
Query: 97 AAPGNTAVTIWWLKKLGSWRSLALAVLQRCRGQVP---ADHCAAEAVGPWRLGP----GA 149
A AV W K G WR RC G P A C+ P L P GA
Sbjct: 111 ALEAKAAVPPGWKKTAGGWR-------MRCAGISPRTLAVSCSPFRKVPLYLHPPLQFGA 163
Query: 150 KEKKRLSASQARLRSHLQPGAYCQAPGP-GPHHQ-QRPRPLGSIAAQEGLEQLLRLSTPR 207
+ + +L A R H AY PGP GP +P L + LE R S+
Sbjct: 164 RPRAQLPAGSLCPRPHTTDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRN 223
Query: 208 ATLPGARSRP 217
A R RP
Sbjct: 224 AREKSGRQRP 233
>gi|25121980 dispatched B [Homo sapiens]
Length = 1401
Score = 35.8 bits (81), Expect = 0.048
Identities = 38/128 (29%), Positives = 49/128 (38%), Gaps = 9/128 (7%)
Query: 174 APGPGPHHQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVG 233
APGPGP +QRP G A +G + +A P A H P E SS
Sbjct: 15 APGPGPEGEQRPE--GEPLAPDGGSP--DSTQTKAVPPEASPERSCSLHSCPLEDPSSSS 70
Query: 234 AGFPIRVLRRERGPL--LREPHRARPPAASVSLATGTRPGL---TPLLPSYWALTPGPAP 288
P + GP L H P A + PGL L +L+P PAP
Sbjct: 71 GPPPTTSTLQPVGPSSPLAPAHFTYPRALQEYQGGSSLPGLGDRAALCSHGSSLSPSPAP 130
Query: 289 SRLISTYR 296
S+ T++
Sbjct: 131 SQRDGTWK 138
>gi|169217315 PREDICTED: hypothetical protein [Homo sapiens]
Length = 2061
Score = 34.3 bits (77), Expect = 0.14
Identities = 47/152 (30%), Positives = 57/152 (37%), Gaps = 28/152 (18%)
Query: 168 PGAYCQ---------APGPGPHHQQRPRPLGSIA----AQEGLEQLLRLSTPRATLPGA- 213
PGA C AP PG +R R +IA A G + + A PGA
Sbjct: 758 PGALCSDRSGASRAIAPTPGTLCSERSRVRRAIAPTPCALCGKGSQVGMGV--APTPGAL 815
Query: 214 -RSRPQAHGHVGPQESQ-----SSVGAGF--PIRVLRRERGPLLRE----PHRARPPAAS 261
R R QA + P S S VG G P L R+R P+ R P +
Sbjct: 816 RRDRSQAGRAIAPTPSALFRVGSRVGTGIALPAGALHRDRSPVRRAVAPTPGTLHCDGSR 875
Query: 262 VSLATGTRPGLTPLLPSYWALTPGPAPSRLIS 293
ATG+ PG P S + PAP L S
Sbjct: 876 KCTATGSTPGALPGDRSGVSKATAPAPGALCS 907
>gi|113430659 PREDICTED: hypothetical protein [Homo sapiens]
Length = 2061
Score = 34.3 bits (77), Expect = 0.14
Identities = 47/152 (30%), Positives = 57/152 (37%), Gaps = 28/152 (18%)
Query: 168 PGAYCQ---------APGPGPHHQQRPRPLGSIA----AQEGLEQLLRLSTPRATLPGA- 213
PGA C AP PG +R R +IA A G + + A PGA
Sbjct: 758 PGALCSDRSGASRAIAPTPGTLCSERSRVRRAIAPTPCALCGKGSQVGMGV--APTPGAL 815
Query: 214 -RSRPQAHGHVGPQESQ-----SSVGAGF--PIRVLRRERGPLLRE----PHRARPPAAS 261
R R QA + P S S VG G P L R+R P+ R P +
Sbjct: 816 RRDRSQAGRAIAPTPSALFRVGSRVGTGIALPAGALHRDRSPVRRAVAPTPGTLHCDGSR 875
Query: 262 VSLATGTRPGLTPLLPSYWALTPGPAPSRLIS 293
ATG+ PG P S + PAP L S
Sbjct: 876 KCTATGSTPGALPGDRSGVSKATAPAPGALCS 907
>gi|113430177 PREDICTED: hypothetical protein [Homo sapiens]
Length = 2028
Score = 34.3 bits (77), Expect = 0.14
Identities = 47/152 (30%), Positives = 57/152 (37%), Gaps = 28/152 (18%)
Query: 168 PGAYCQ---------APGPGPHHQQRPRPLGSIA----AQEGLEQLLRLSTPRATLPGA- 213
PGA C AP PG +R R +IA A G + + A PGA
Sbjct: 726 PGALCSDRSGASRAIAPTPGTLCSERSRVRRAIAPTPCALCGKGSQVGMGV--APTPGAL 783
Query: 214 -RSRPQAHGHVGPQESQ-----SSVGAGF--PIRVLRRERGPLLRE----PHRARPPAAS 261
R R QA + P S S VG G P L R+R P+ R P +
Sbjct: 784 RRDRSQAGRAIAPTPSALFRVGSRVGTGIALPAGALHRDRSPVRRAVAPTPGTLHCDGSR 843
Query: 262 VSLATGTRPGLTPLLPSYWALTPGPAPSRLIS 293
ATG+ PG P S + PAP L S
Sbjct: 844 KCTATGSTPGALPGDRSGVSKATAPAPGALCS 875
>gi|113430175 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1934
Score = 34.3 bits (77), Expect = 0.14
Identities = 47/152 (30%), Positives = 57/152 (37%), Gaps = 28/152 (18%)
Query: 168 PGAYCQ---------APGPGPHHQQRPRPLGSIA----AQEGLEQLLRLSTPRATLPGA- 213
PGA C AP PG +R R +IA A G + + A PGA
Sbjct: 632 PGALCSDRSGASRAIAPTPGTLCSERSRVRRAIAPTPCALCGKGSQVGMGV--APTPGAL 689
Query: 214 -RSRPQAHGHVGPQESQ-----SSVGAGF--PIRVLRRERGPLLRE----PHRARPPAAS 261
R R QA + P S S VG G P L R+R P+ R P +
Sbjct: 690 RRDRSQAGRAIAPTPSALFRVGSRVGTGIALPAGALHRDRSPVRRAVAPTPGTLHCDGSR 749
Query: 262 VSLATGTRPGLTPLLPSYWALTPGPAPSRLIS 293
ATG+ PG P S + PAP L S
Sbjct: 750 KCTATGSTPGALPGDRSGVSKATAPAPGALCS 781
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 34.3 bits (77), Expect = 0.14
Identities = 44/182 (24%), Positives = 64/182 (35%), Gaps = 21/182 (11%)
Query: 124 QRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPHHQQ 183
QR R P + P L G + ++ + A+ R Q G P PGP Q+
Sbjct: 421 QRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGP----PQPGPGPQR 476
Query: 184 RPRPLGSIAAQEGLEQLLRLSTPRAT-----LPGARSRPQAHGHVGPQESQSSVGAGFPI 238
+ PL +G + L L P + LP S PQ Q + A P
Sbjct: 477 QGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQ----------QPASQAAPPT 526
Query: 239 RVLRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWALTPGPAPSRLISTYRGG 298
+ R+ P+ P PPAA + + P + GPAP + GG
Sbjct: 527 QGQGRQSRPVAGGP--GAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGG 584
Query: 299 DR 300
+
Sbjct: 585 QQ 586
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 34.3 bits (77), Expect = 0.14
Identities = 44/182 (24%), Positives = 64/182 (35%), Gaps = 21/182 (11%)
Query: 124 QRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPHHQQ 183
QR R P + P L G + ++ + A+ R Q G P PGP Q+
Sbjct: 421 QRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGP----PQPGPGPQR 476
Query: 184 RPRPLGSIAAQEGLEQLLRLSTPRAT-----LPGARSRPQAHGHVGPQESQSSVGAGFPI 238
+ PL +G + L L P + LP S PQ Q + A P
Sbjct: 477 QGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQ----------QPASQAAPPT 526
Query: 239 RVLRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWALTPGPAPSRLISTYRGG 298
+ R+ P+ P PPAA + + P + GPAP + GG
Sbjct: 527 QGQGRQSRPVAGGP--GAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGG 584
Query: 299 DR 300
+
Sbjct: 585 QQ 586
>gi|239755589 PREDICTED: hypothetical protein [Homo sapiens]
Length = 356
Score = 33.9 bits (76), Expect = 0.18
Identities = 47/160 (29%), Positives = 65/160 (40%), Gaps = 48/160 (30%)
Query: 38 SREASG----NASHTVMTHRHTEREEPCLGVLPQRLCSSPKSLDICSQPSEG----KSLS 89
+REAS SHT R T+R L QR SS S ++ S G +LS
Sbjct: 205 AREASSWKPPGHSHTAPPGRGTQRP------LTQRH-SSESSSELSSSAWPGTIWTSTLS 257
Query: 90 WEHRFKGAAPGN-TAVTIWWL-KKLGSWRSLALAVLQRCRGQVPADHCAAEAVGPWRLGP 147
R P + A+T W L ++ G+ +A+ RCR A+GPW
Sbjct: 258 PGQRLPTPPPPDPAALTSWGLPQQQGACVPEGIALALRCR-----------AMGPW---- 302
Query: 148 GAKEKKRLSASQARLRSHLQPGAYCQAPGPGPHHQQRPRP 187
E++ SA+ +PGPGPH + RP P
Sbjct: 303 ---EEQNWSATSG-------------SPGPGPHPRSRPTP 326
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 33.9 bits (76), Expect = 0.18
Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 28/158 (17%)
Query: 126 CRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPHHQQRP 185
C GQVP+ A + P +K++LSAS + + + P P + P
Sbjct: 856 CTGQVPS---AEDEPAP--------KKQKLSASVKKEDLKSKHDSSAPDPAPDSADEVMP 904
Query: 186 RPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQ------SSVGAGFPIR 239
+ +A++ GLE + R PG P GH P + +S G+G
Sbjct: 905 EAVPEVASEPGLESASHPNVDRTYFPG----PPGDGHPEPSPLEDLSPCPASCGSGVVTT 960
Query: 240 VLRRERGPLLREPHRARPPAASVSLAT-GTRPGLTPLL 276
V R P R P ++ ++A+ +RP T ++
Sbjct: 961 VTVSGRDP------RTAPSSSCTAVASAASRPDSTHMV 992
>gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens]
Length = 1189
Score = 33.9 bits (76), Expect = 0.18
Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 28/158 (17%)
Query: 126 CRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPHHQQRP 185
C GQVP+ A + P +K++LSAS + + + P P + P
Sbjct: 856 CTGQVPS---AEDEPAP--------KKQKLSASVKKEDLKSKHDSSAPDPAPDSADEVMP 904
Query: 186 RPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQ------SSVGAGFPIR 239
+ +A++ GLE + R PG P GH P + +S G+G
Sbjct: 905 EAVPEVASEPGLESASHPNVDRTYFPG----PPGDGHPEPSPLEDLSPCPASCGSGVVTT 960
Query: 240 VLRRERGPLLREPHRARPPAASVSLAT-GTRPGLTPLL 276
V R P R P ++ ++A+ +RP T ++
Sbjct: 961 VTVSGRDP------RTAPSSSCTAVASAASRPDSTHMV 992
>gi|169160624 PREDICTED: hypothetical protein [Homo sapiens]
Length = 284
Score = 33.5 bits (75), Expect = 0.24
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Query: 167 QPGAYCQAPGPGPHHQQRPRPLGSIA-----AQEGLEQLLRLSTPRATLPGARSRPQAHG 221
+PG +P P P RPRP G A A G +L R P TL G ++ + HG
Sbjct: 173 RPGGGAASPLPAPLLASRPRPRGRCAPDGAQAGVGASRLRRRRAPSGTLNGPYAQDK-HG 231
Query: 222 ----HVGPQESQSSVGAGFPIRVLRRERGP 247
H ++ + V P +V R GP
Sbjct: 232 LNQVHAPAGDALTEVRTAVPGQVKPRTLGP 261
>gi|113412136 PREDICTED: hypothetical protein [Homo sapiens]
Length = 151
Score = 33.5 bits (75), Expect = 0.24
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Query: 167 QPGAYCQAPGPGPHHQQRPRPLGSIA-----AQEGLEQLLRLSTPRATLPGARSRPQAHG 221
+PG +P P P RPRP G A A G +L R P TL G ++ + HG
Sbjct: 40 RPGGGAASPLPAPLLASRPRPRGRCAPDGAQAGVGASRLRRRRAPSGTLNGPYAQDK-HG 98
Query: 222 ----HVGPQESQSSVGAGFPIRVLRRERGP 247
H ++ + V P +V R GP
Sbjct: 99 LNQVHAPAGDALTEVRTAVPGQVKPRTLGP 128
>gi|113408483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 151
Score = 33.5 bits (75), Expect = 0.24
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Query: 167 QPGAYCQAPGPGPHHQQRPRPLGSIA-----AQEGLEQLLRLSTPRATLPGARSRPQAHG 221
+PG +P P P RPRP G A A G +L R P TL G ++ + HG
Sbjct: 40 RPGGGAASPLPAPLLASRPRPRGRCAPDGAQAGVGASRLRRRRAPSGTLNGPYAQDK-HG 98
Query: 222 ----HVGPQESQSSVGAGFPIRVLRRERGP 247
H ++ + V P +V R GP
Sbjct: 99 LNQVHAPAGDALTEVRTAVPGQVKPRTLGP 128
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 33.1 bits (74), Expect = 0.31
Identities = 37/115 (32%), Positives = 44/115 (38%), Gaps = 13/115 (11%)
Query: 132 ADHC---AAEAVGPWRLGPGAKEKKR--LSASQARLRSHLQPGAYCQAPGPGPHHQQRPR 186
ADH A E RLGP A ++ L A A L PG P P P + P
Sbjct: 422 ADHYQTPALEVSHHGRLGPSAHSSRKPFLGAPAATPHLSLPPGPSSPPPPPCPRLLRPPP 481
Query: 187 PLGSI------AAQEGLEQLLRL--STPRATLPGARSRPQAHGHVGPQESQSSVG 233
P + AA+E E L L T P P G +GP S+ SVG
Sbjct: 482 PPAWLKGPACRAAREDGEILEELFFGTEGPPRPAPPPLPHREGFLGPPASRFSVG 536
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 33.1 bits (74), Expect = 0.31
Identities = 40/141 (28%), Positives = 52/141 (36%), Gaps = 17/141 (12%)
Query: 167 QPGAYCQAPGPGPHHQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQ 226
+P A QAP P P RP P + G ++ RL +L + + G GP
Sbjct: 299 RPSASSQAPPPPPP-PSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPL 357
Query: 227 ESQSSVGAGFPIRVLRRERGPLLREPHRARPPAASVSL---------------ATGTRPG 271
S P+R GPL P +R + S +L +G RP
Sbjct: 358 PPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPP 417
Query: 272 LTPLLPSYWALTPGPAPSRLI 292
L P PS A P P PS I
Sbjct: 418 LPPDRPSAGA-PPPPPPSTSI 437
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 33.1 bits (74), Expect = 0.31
Identities = 40/141 (28%), Positives = 52/141 (36%), Gaps = 17/141 (12%)
Query: 167 QPGAYCQAPGPGPHHQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQ 226
+P A QAP P P RP P + G ++ RL +L + + G GP
Sbjct: 299 RPSASSQAPPPPPP-PSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPL 357
Query: 227 ESQSSVGAGFPIRVLRRERGPLLREPHRARPPAASVSL---------------ATGTRPG 271
S P+R GPL P +R + S +L +G RP
Sbjct: 358 PPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPP 417
Query: 272 LTPLLPSYWALTPGPAPSRLI 292
L P PS A P P PS I
Sbjct: 418 LPPDRPSAGA-PPPPPPSTSI 437
>gi|145580575 C-terminal binding protein 2 isoform 2 [Homo sapiens]
Length = 985
Score = 33.1 bits (74), Expect = 0.31
Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 6/116 (5%)
Query: 186 RPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRVLRRER 245
R L +A E LR LP ARS +H +S+GA P++
Sbjct: 340 RVLSRLANSCRTEMQLRRQDRGGPLPRARSSSFSHRSELLHGDLASLGAAAPLQTASPRA 399
Query: 246 GPLLREPHRARPPAASVSLATGTRPGL---TPLLPS---YWALTPGPAPSRLISTY 295
G R P A + AT + PG+ P PS Y + TP +RL TY
Sbjct: 400 GDPARRPSSAPSQHLLETAATYSAPGVGTHAPHFPSNSGYSSPTPCALTARLSPTY 455
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,432,752
Number of Sequences: 37866
Number of extensions: 876942
Number of successful extensions: 3625
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 170
Number of HSP's that attempted gapping in prelim test: 3470
Number of HSP's gapped (non-prelim): 345
length of query: 303
length of database: 18,247,518
effective HSP length: 102
effective length of query: 201
effective length of database: 14,385,186
effective search space: 2891422386
effective search space used: 2891422386
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.