Guide to the Human Genome
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Search of human proteins with 239756720

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239756720 PREDICTED: hypothetical protein XP_002345024 [Homo
sapiens]
         (303 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756720 PREDICTED: hypothetical protein XP_002345024 [Homo ...   627   e-180
gi|239751215 PREDICTED: hypothetical protein XP_002347750 [Homo ...   627   e-180
gi|239745705 PREDICTED: hypothetical protein XP_002343521 [Homo ...   625   e-179
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             39   0.004
gi|169214712 PREDICTED: hypothetical protein [Homo sapiens]            38   0.010
gi|113428936 PREDICTED: hypothetical protein [Homo sapiens]            38   0.010
gi|91208420 bassoon protein [Homo sapiens]                             38   0.010
gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]          38   0.010
gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain...    38   0.010
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [...    37   0.017
gi|156071470 hyperpolarization activated cyclic nucleotide-gated...    37   0.028
gi|148762940 DVL-binding protein DAPLE [Homo sapiens]                  36   0.037
gi|113428809 PREDICTED: hypothetical protein [Homo sapiens]            36   0.048
gi|25121980 dispatched B [Homo sapiens]                                36   0.048
gi|169217315 PREDICTED: hypothetical protein [Homo sapiens]            34   0.14 
gi|113430659 PREDICTED: hypothetical protein [Homo sapiens]            34   0.14 
gi|113430177 PREDICTED: hypothetical protein [Homo sapiens]            34   0.14 
gi|113430175 PREDICTED: hypothetical protein [Homo sapiens]            34   0.14 
gi|19924099 synapsin I isoform Ia [Homo sapiens]                       34   0.14 
gi|19924097 synapsin I isoform Ib [Homo sapiens]                       34   0.14 
gi|239755589 PREDICTED: hypothetical protein [Homo sapiens]            34   0.18 
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]       34   0.18 
gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens]       34   0.18 
gi|169160624 PREDICTED: hypothetical protein [Homo sapiens]            33   0.24 
gi|113412136 PREDICTED: hypothetical protein [Homo sapiens]            33   0.24 
gi|113408483 PREDICTED: hypothetical protein [Homo sapiens]            33   0.24 
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]         33   0.31 
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo...    33   0.31 
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ...    33   0.31 
gi|145580575 C-terminal binding protein 2 isoform 2 [Homo sapiens]     33   0.31 

>gi|239756720 PREDICTED: hypothetical protein XP_002345024 [Homo
           sapiens]
          Length = 303

 Score =  627 bits (1618), Expect = e-180
 Identities = 303/303 (100%), Positives = 303/303 (100%)

Query: 1   MLVCVGSEIYKDLKLRNSDRERCISDLHTCNIMKKGESREASGNASHTVMTHRHTEREEP 60
           MLVCVGSEIYKDLKLRNSDRERCISDLHTCNIMKKGESREASGNASHTVMTHRHTEREEP
Sbjct: 1   MLVCVGSEIYKDLKLRNSDRERCISDLHTCNIMKKGESREASGNASHTVMTHRHTEREEP 60

Query: 61  CLGVLPQRLCSSPKSLDICSQPSEGKSLSWEHRFKGAAPGNTAVTIWWLKKLGSWRSLAL 120
           CLGVLPQRLCSSPKSLDICSQPSEGKSLSWEHRFKGAAPGNTAVTIWWLKKLGSWRSLAL
Sbjct: 61  CLGVLPQRLCSSPKSLDICSQPSEGKSLSWEHRFKGAAPGNTAVTIWWLKKLGSWRSLAL 120

Query: 121 AVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPH 180
           AVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPH
Sbjct: 121 AVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPH 180

Query: 181 HQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRV 240
           HQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRV
Sbjct: 181 HQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRV 240

Query: 241 LRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWALTPGPAPSRLISTYRGGDR 300
           LRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWALTPGPAPSRLISTYRGGDR
Sbjct: 241 LRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWALTPGPAPSRLISTYRGGDR 300

Query: 301 MAT 303
           MAT
Sbjct: 301 MAT 303


>gi|239751215 PREDICTED: hypothetical protein XP_002347750 [Homo
           sapiens]
          Length = 303

 Score =  627 bits (1618), Expect = e-180
 Identities = 303/303 (100%), Positives = 303/303 (100%)

Query: 1   MLVCVGSEIYKDLKLRNSDRERCISDLHTCNIMKKGESREASGNASHTVMTHRHTEREEP 60
           MLVCVGSEIYKDLKLRNSDRERCISDLHTCNIMKKGESREASGNASHTVMTHRHTEREEP
Sbjct: 1   MLVCVGSEIYKDLKLRNSDRERCISDLHTCNIMKKGESREASGNASHTVMTHRHTEREEP 60

Query: 61  CLGVLPQRLCSSPKSLDICSQPSEGKSLSWEHRFKGAAPGNTAVTIWWLKKLGSWRSLAL 120
           CLGVLPQRLCSSPKSLDICSQPSEGKSLSWEHRFKGAAPGNTAVTIWWLKKLGSWRSLAL
Sbjct: 61  CLGVLPQRLCSSPKSLDICSQPSEGKSLSWEHRFKGAAPGNTAVTIWWLKKLGSWRSLAL 120

Query: 121 AVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPH 180
           AVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPH
Sbjct: 121 AVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPH 180

Query: 181 HQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRV 240
           HQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRV
Sbjct: 181 HQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRV 240

Query: 241 LRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWALTPGPAPSRLISTYRGGDR 300
           LRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWALTPGPAPSRLISTYRGGDR
Sbjct: 241 LRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWALTPGPAPSRLISTYRGGDR 300

Query: 301 MAT 303
           MAT
Sbjct: 301 MAT 303


>gi|239745705 PREDICTED: hypothetical protein XP_002343521 [Homo
           sapiens]
          Length = 303

 Score =  625 bits (1612), Expect = e-179
 Identities = 302/303 (99%), Positives = 302/303 (99%)

Query: 1   MLVCVGSEIYKDLKLRNSDRERCISDLHTCNIMKKGESREASGNASHTVMTHRHTEREEP 60
           MLVCVGSEIYKDLKLRNSDRERCISDLHTCNIMKKGESREASGNASHTVMTHRHTEREEP
Sbjct: 1   MLVCVGSEIYKDLKLRNSDRERCISDLHTCNIMKKGESREASGNASHTVMTHRHTEREEP 60

Query: 61  CLGVLPQRLCSSPKSLDICSQPSEGKSLSWEHRFKGAAPGNTAVTIWWLKKLGSWRSLAL 120
           CLGVLPQRLCSSPKSLDICSQPSEGKSLSWEHRFKGAAPGNTAVTIWWLKKLGSWRSLAL
Sbjct: 61  CLGVLPQRLCSSPKSLDICSQPSEGKSLSWEHRFKGAAPGNTAVTIWWLKKLGSWRSLAL 120

Query: 121 AVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPH 180
           AVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPH
Sbjct: 121 AVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPH 180

Query: 181 HQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRV 240
           HQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRV
Sbjct: 181 HQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRV 240

Query: 241 LRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWALTPGPAPSRLISTYRGGDR 300
           LRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWA TPGPAPSRLISTYRGGDR
Sbjct: 241 LRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWARTPGPAPSRLISTYRGGDR 300

Query: 301 MAT 303
           MAT
Sbjct: 301 MAT 303


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 43/145 (29%), Positives = 53/145 (36%), Gaps = 20/145 (13%)

Query: 137 AEAVGPWRLG---PGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPHHQQRPRPLGSIAA 193
           + A  P R G   P     +  S S +R RS    G+   APGPGP         GS   
Sbjct: 398 SSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEP-------GSERG 450

Query: 194 QEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRVLRRERGPLLREPH 253
             G  +  +   PRA        P AHG  G  E +SS           R  GP  R   
Sbjct: 451 HGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSS----------SRSPGPHPRSWS 500

Query: 254 RARPPAASVSLATGTRPGLTPLLPS 278
            +R P+ S S +   RP      PS
Sbjct: 501 SSRSPSKSRSRSAEKRPHSPSRSPS 525


>gi|169214712 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 235

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 40/130 (30%), Positives = 48/130 (36%), Gaps = 16/130 (12%)

Query: 97  AAPGNTAVTIWWLKKLGSWRSLALAVLQRCRG---QVPADHCAAEAVGPWRLGP----GA 149
           A     AV   W K  G WR        RC G   + PA  C+     P  L P    GA
Sbjct: 111 ALEAKAAVPPGWKKTAGGWR-------MRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGA 163

Query: 150 KEKKRLSASQARLRSHLQPGAYCQAPGP-GPHHQ-QRPRPLGSIAAQEGLEQLLRLSTPR 207
           + + +L A     R H    AY   PGP GP     +P  L   +    LE   R S+  
Sbjct: 164 RPRAQLPAGSLCPRPHTTDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRN 223

Query: 208 ATLPGARSRP 217
           A     R RP
Sbjct: 224 AREKSGRQRP 233


>gi|113428936 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 235

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 40/130 (30%), Positives = 48/130 (36%), Gaps = 16/130 (12%)

Query: 97  AAPGNTAVTIWWLKKLGSWRSLALAVLQRCRG---QVPADHCAAEAVGPWRLGP----GA 149
           A     AV   W K  G WR        RC G   + PA  C+     P  L P    GA
Sbjct: 111 ALEAKAAVPPGWKKTAGGWR-------MRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGA 163

Query: 150 KEKKRLSASQARLRSHLQPGAYCQAPGP-GPHHQ-QRPRPLGSIAAQEGLEQLLRLSTPR 207
           + + +L A     R H    AY   PGP GP     +P  L   +    LE   R S+  
Sbjct: 164 RPRAQLPAGSLCPRPHTTDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRN 223

Query: 208 ATLPGARSRP 217
           A     R RP
Sbjct: 224 AREKSGRQRP 233


>gi|91208420 bassoon protein [Homo sapiens]
          Length = 3926

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 43/160 (26%), Positives = 60/160 (37%), Gaps = 15/160 (9%)

Query: 150  KEKKRLSASQARLRSHLQPGAYCQAPG----PGPHHQQRPR----PLGSIAAQ---EGLE 198
            K  ++  +  A L+S  +P A  Q  G    PGP   Q P     P G+ + Q   +  +
Sbjct: 3723 KGSRQAHSGPAALQSKAEPQAQPQLQGRQAAPGPQQSQSPSSRQIPSGAASRQPQTQQQQ 3782

Query: 199  QLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRVLRRERGPLLREPHRARPP 258
            Q L L  P+  L  AR + Q+          +S  AG P        GP    P RA   
Sbjct: 3783 QGLGLQPPQQALTQARLQQQSQPTTRGSAPAASQPAGKPQPGPSTATGPQPAGPPRAEQT 3842

Query: 259  AASVSLATGTRPGLTPLLPSYWALTPGPAPSRLISTYRGG 298
              S   A   + G  P         PGP P+ + +  R G
Sbjct: 3843 NGSKGTAKAPQQGRAPQAQP----APGPGPAGVKAGARPG 3878



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 10/14 (71%), Positives = 11/14 (78%)

Query: 176  GPGPHHQQRPRPLG 189
            GPGPH +QRP P G
Sbjct: 1962 GPGPHEEQRPYPQG 1975


>gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]
          Length = 331

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 141 GPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPHHQQRPRPLGSIAAQEGLEQL 200
           GP   G  A++ K   A+ A  R  +     C+ PGP P     P P    A   G  ++
Sbjct: 63  GPAGGGGAARDLKGRDAATAEARHRVPTTELCRPPGPAP----APAPASVTAELPGDGRM 118

Query: 201 LRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGF 236
           ++LS P    P A  R   +    P    +S+G+GF
Sbjct: 119 VQLSPPALAAPAAPGRALLYSLSQP---LASLGSGF 151


>gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain and
            proline-rich containing [Homo sapiens]
          Length = 1435

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 50/165 (30%), Positives = 69/165 (41%), Gaps = 18/165 (10%)

Query: 141  GPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPHHQ-QRPRPLGSIAAQE--GL 197
            GP   GP +   K L     +L + L+   + Q  GPGP    Q P P  +  + +  GL
Sbjct: 1278 GPGSQGPESATWKTLGQ---QLNAELRSRGWGQQDGPGPPSPGQSPSPCRTSPSPDSLGL 1334

Query: 198  EQLLRLSTPRATLPGARSRPQAHGH--VGPQESQSSVGAGFPIRVLRRERGPLL-REPHR 254
             +   L  PR      R RP + G   V   E Q    A  P+R+   +R P+L R P  
Sbjct: 1335 PEDPCLG-PRNEDGQLRPRPLSAGRRAVSVHEDQLQAPAERPLRL---QRSPVLKRRPKL 1390

Query: 255  ARPPAASVSLATGTRP-GLTPLLPSYWALTPGPAPSRLISTYRGG 298
              PP+ S+    GT P    P  PS    +P  +P    +  RGG
Sbjct: 1391 EAPPSPSLGSGLGTEPLPPQPTEPS----SPERSPPSPATDQRGG 1431


>gi|24308073 protein tyrosine phosphatase, non-receptor type 23
           [Homo sapiens]
          Length = 1636

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 41/151 (27%), Positives = 55/151 (36%), Gaps = 42/151 (27%)

Query: 165 HLQPGAYCQAPGPGPHHQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHG--- 221
           H  P  +  + GPGPH+   P P G+ +   G  QL++   PRA  PG  + P A G   
Sbjct: 770 HFPPSPFPSSTGPGPHYLSGPLPPGTYS---GPTQLIQ---PRA--PGPHAMPVAPGPAL 821

Query: 222 --------------HVGPQE---SQSSVGAGFPIRVLRRERGPLLREPHRARPPAASVSL 264
                            PQ    S   VG G           P+   P    P  +   L
Sbjct: 822 YPAPAYTPELGLVPRSSPQHGVVSSPYVGVG--------PAPPVAGLPSAPPPQFSGPEL 873

Query: 265 ATGTRPGLTPL------LPSYWALTPGPAPS 289
           A   RP  T +      +PS+ A  P P P+
Sbjct: 874 AMAVRPATTTVDSIQAPIPSHTAPRPNPTPA 904


>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 2 [Homo sapiens]
          Length = 889

 Score = 36.6 bits (83), Expect = 0.028
 Identities = 48/174 (27%), Positives = 57/174 (32%), Gaps = 44/174 (25%)

Query: 119 ALAVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPG 178
           A+A LQ+          A   VGP  LG              RL     PG    A  PG
Sbjct: 726 AIATLQQAAAMSFCPQVARPLVGPLALG------------SPRLVRRPPPGPAPAAASPG 773

Query: 179 PHHQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAH--GHVGPQESQSSVGAGF 236
           P                          P A+ PGA + P+A      G   +    G   
Sbjct: 774 P-------------------------PPPASPPGAPASPRAPRTSPYGGLPAAPLAGPAL 808

Query: 237 PIRVLRRERGPLLRE----PHRARPPAASVSLATGTRPGLTPLLPSYWALTPGP 286
           P R L R   PL       PH A  PAAS   A+ + P L P  P+  A  P P
Sbjct: 809 PARRLSRASRPLSASQPSLPHGAPGPAASTRPASSSTPRLGP-TPAARAAAPSP 861


>gi|148762940 DVL-binding protein DAPLE [Homo sapiens]
          Length = 2028

 Score = 36.2 bits (82), Expect = 0.037
 Identities = 64/243 (26%), Positives = 90/243 (37%), Gaps = 39/243 (16%)

Query: 53   RHTEREEPCLGVLPQRLCSSPKSLDICSQPSEGKSLSWEHRFKGAAPGNTAVTIWWLKKL 112
            R TE E P   V P R    P+SL +  +P +       H     AP + + ++     L
Sbjct: 1756 RLTEAEAPP-SVAP-RQAQPPQSLSL-GRPRQAPVPPASH-----APASRSASLSRAFSL 1807

Query: 113  GSWRSLALAVLQRCRGQVPADHCAAEAVGPWRLGPGAKEKKR--LSASQARLRSHL--QP 168
             S   L  +  + C+ + P    A EA+G    G    +      S S AR R+ L  + 
Sbjct: 1808 ASADLLRASGPEACKQESPQKLGAPEALGGRETGSHTLQSPAPPSSHSLARERTPLVGKA 1867

Query: 169  GAYCQAPGP--------------------GPHHQQRPRPL------GSIAAQEGLEQLLR 202
            G+ CQ PGP                     P HQ    P       G+ AA  G    L 
Sbjct: 1868 GSSCQGPGPRSRPLDTRRFSLAPPKEERLAPLHQSATAPAIATAGAGAAAAGSGSNSQLL 1927

Query: 203  LSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRVLRRERGPLLREPHRARPPAASV 262
              +P A  P AR++P+A    G   + + V AG  +       G    E   A+ P  S 
Sbjct: 1928 HFSPAAA-PAARTKPKAPPRSGEVATITPVRAGLSLSEGDGVPGQGCSEGLPAKSPGRSP 1986

Query: 263  SLA 265
             LA
Sbjct: 1987 DLA 1989


>gi|113428809 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 235

 Score = 35.8 bits (81), Expect = 0.048
 Identities = 40/130 (30%), Positives = 47/130 (36%), Gaps = 16/130 (12%)

Query: 97  AAPGNTAVTIWWLKKLGSWRSLALAVLQRCRGQVP---ADHCAAEAVGPWRLGP----GA 149
           A     AV   W K  G WR        RC G  P   A  C+     P  L P    GA
Sbjct: 111 ALEAKAAVPPGWKKTAGGWR-------MRCAGISPRTLAVSCSPFRKVPLYLHPPLQFGA 163

Query: 150 KEKKRLSASQARLRSHLQPGAYCQAPGP-GPHHQ-QRPRPLGSIAAQEGLEQLLRLSTPR 207
           + + +L A     R H    AY   PGP GP     +P  L   +    LE   R S+  
Sbjct: 164 RPRAQLPAGSLCPRPHTTDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRN 223

Query: 208 ATLPGARSRP 217
           A     R RP
Sbjct: 224 AREKSGRQRP 233


>gi|25121980 dispatched B [Homo sapiens]
          Length = 1401

 Score = 35.8 bits (81), Expect = 0.048
 Identities = 38/128 (29%), Positives = 49/128 (38%), Gaps = 9/128 (7%)

Query: 174 APGPGPHHQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVG 233
           APGPGP  +QRP   G   A +G       +  +A  P A        H  P E  SS  
Sbjct: 15  APGPGPEGEQRPE--GEPLAPDGGSP--DSTQTKAVPPEASPERSCSLHSCPLEDPSSSS 70

Query: 234 AGFPIRVLRRERGPL--LREPHRARPPAASVSLATGTRPGL---TPLLPSYWALTPGPAP 288
              P     +  GP   L   H   P A        + PGL     L     +L+P PAP
Sbjct: 71  GPPPTTSTLQPVGPSSPLAPAHFTYPRALQEYQGGSSLPGLGDRAALCSHGSSLSPSPAP 130

Query: 289 SRLISTYR 296
           S+   T++
Sbjct: 131 SQRDGTWK 138


>gi|169217315 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 2061

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 47/152 (30%), Positives = 57/152 (37%), Gaps = 28/152 (18%)

Query: 168 PGAYCQ---------APGPGPHHQQRPRPLGSIA----AQEGLEQLLRLSTPRATLPGA- 213
           PGA C          AP PG    +R R   +IA    A  G    + +    A  PGA 
Sbjct: 758 PGALCSDRSGASRAIAPTPGTLCSERSRVRRAIAPTPCALCGKGSQVGMGV--APTPGAL 815

Query: 214 -RSRPQAHGHVGPQESQ-----SSVGAGF--PIRVLRRERGPLLRE----PHRARPPAAS 261
            R R QA   + P  S      S VG G   P   L R+R P+ R     P       + 
Sbjct: 816 RRDRSQAGRAIAPTPSALFRVGSRVGTGIALPAGALHRDRSPVRRAVAPTPGTLHCDGSR 875

Query: 262 VSLATGTRPGLTPLLPSYWALTPGPAPSRLIS 293
              ATG+ PG  P   S  +    PAP  L S
Sbjct: 876 KCTATGSTPGALPGDRSGVSKATAPAPGALCS 907


>gi|113430659 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 2061

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 47/152 (30%), Positives = 57/152 (37%), Gaps = 28/152 (18%)

Query: 168 PGAYCQ---------APGPGPHHQQRPRPLGSIA----AQEGLEQLLRLSTPRATLPGA- 213
           PGA C          AP PG    +R R   +IA    A  G    + +    A  PGA 
Sbjct: 758 PGALCSDRSGASRAIAPTPGTLCSERSRVRRAIAPTPCALCGKGSQVGMGV--APTPGAL 815

Query: 214 -RSRPQAHGHVGPQESQ-----SSVGAGF--PIRVLRRERGPLLRE----PHRARPPAAS 261
            R R QA   + P  S      S VG G   P   L R+R P+ R     P       + 
Sbjct: 816 RRDRSQAGRAIAPTPSALFRVGSRVGTGIALPAGALHRDRSPVRRAVAPTPGTLHCDGSR 875

Query: 262 VSLATGTRPGLTPLLPSYWALTPGPAPSRLIS 293
              ATG+ PG  P   S  +    PAP  L S
Sbjct: 876 KCTATGSTPGALPGDRSGVSKATAPAPGALCS 907


>gi|113430177 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 2028

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 47/152 (30%), Positives = 57/152 (37%), Gaps = 28/152 (18%)

Query: 168 PGAYCQ---------APGPGPHHQQRPRPLGSIA----AQEGLEQLLRLSTPRATLPGA- 213
           PGA C          AP PG    +R R   +IA    A  G    + +    A  PGA 
Sbjct: 726 PGALCSDRSGASRAIAPTPGTLCSERSRVRRAIAPTPCALCGKGSQVGMGV--APTPGAL 783

Query: 214 -RSRPQAHGHVGPQESQ-----SSVGAGF--PIRVLRRERGPLLRE----PHRARPPAAS 261
            R R QA   + P  S      S VG G   P   L R+R P+ R     P       + 
Sbjct: 784 RRDRSQAGRAIAPTPSALFRVGSRVGTGIALPAGALHRDRSPVRRAVAPTPGTLHCDGSR 843

Query: 262 VSLATGTRPGLTPLLPSYWALTPGPAPSRLIS 293
              ATG+ PG  P   S  +    PAP  L S
Sbjct: 844 KCTATGSTPGALPGDRSGVSKATAPAPGALCS 875


>gi|113430175 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1934

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 47/152 (30%), Positives = 57/152 (37%), Gaps = 28/152 (18%)

Query: 168 PGAYCQ---------APGPGPHHQQRPRPLGSIA----AQEGLEQLLRLSTPRATLPGA- 213
           PGA C          AP PG    +R R   +IA    A  G    + +    A  PGA 
Sbjct: 632 PGALCSDRSGASRAIAPTPGTLCSERSRVRRAIAPTPCALCGKGSQVGMGV--APTPGAL 689

Query: 214 -RSRPQAHGHVGPQESQ-----SSVGAGF--PIRVLRRERGPLLRE----PHRARPPAAS 261
            R R QA   + P  S      S VG G   P   L R+R P+ R     P       + 
Sbjct: 690 RRDRSQAGRAIAPTPSALFRVGSRVGTGIALPAGALHRDRSPVRRAVAPTPGTLHCDGSR 749

Query: 262 VSLATGTRPGLTPLLPSYWALTPGPAPSRLIS 293
              ATG+ PG  P   S  +    PAP  L S
Sbjct: 750 KCTATGSTPGALPGDRSGVSKATAPAPGALCS 781


>gi|19924099 synapsin I isoform Ia [Homo sapiens]
          Length = 705

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 44/182 (24%), Positives = 64/182 (35%), Gaps = 21/182 (11%)

Query: 124 QRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPHHQQ 183
           QR R   P      +   P  L  G +  ++ +   A+ R   Q G     P PGP  Q+
Sbjct: 421 QRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGP----PQPGPGPQR 476

Query: 184 RPRPLGSIAAQEGLEQLLRLSTPRAT-----LPGARSRPQAHGHVGPQESQSSVGAGFPI 238
           +  PL      +G + L  L  P  +     LP   S PQ          Q +  A  P 
Sbjct: 477 QGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQ----------QPASQAAPPT 526

Query: 239 RVLRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWALTPGPAPSRLISTYRGG 298
           +   R+  P+   P    PPAA    +   +    P   +      GPAP +      GG
Sbjct: 527 QGQGRQSRPVAGGP--GAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGG 584

Query: 299 DR 300
            +
Sbjct: 585 QQ 586


>gi|19924097 synapsin I isoform Ib [Homo sapiens]
          Length = 669

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 44/182 (24%), Positives = 64/182 (35%), Gaps = 21/182 (11%)

Query: 124 QRCRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPHHQQ 183
           QR R   P      +   P  L  G +  ++ +   A+ R   Q G     P PGP  Q+
Sbjct: 421 QRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGP----PQPGPGPQR 476

Query: 184 RPRPLGSIAAQEGLEQLLRLSTPRAT-----LPGARSRPQAHGHVGPQESQSSVGAGFPI 238
           +  PL      +G + L  L  P  +     LP   S PQ          Q +  A  P 
Sbjct: 477 QGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQ----------QPASQAAPPT 526

Query: 239 RVLRRERGPLLREPHRARPPAASVSLATGTRPGLTPLLPSYWALTPGPAPSRLISTYRGG 298
           +   R+  P+   P    PPAA    +   +    P   +      GPAP +      GG
Sbjct: 527 QGQGRQSRPVAGGP--GAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGG 584

Query: 299 DR 300
            +
Sbjct: 585 QQ 586


>gi|239755589 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 356

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 47/160 (29%), Positives = 65/160 (40%), Gaps = 48/160 (30%)

Query: 38  SREASG----NASHTVMTHRHTEREEPCLGVLPQRLCSSPKSLDICSQPSEG----KSLS 89
           +REAS       SHT    R T+R       L QR  SS  S ++ S    G     +LS
Sbjct: 205 AREASSWKPPGHSHTAPPGRGTQRP------LTQRH-SSESSSELSSSAWPGTIWTSTLS 257

Query: 90  WEHRFKGAAPGN-TAVTIWWL-KKLGSWRSLALAVLQRCRGQVPADHCAAEAVGPWRLGP 147
              R     P +  A+T W L ++ G+     +A+  RCR           A+GPW    
Sbjct: 258 PGQRLPTPPPPDPAALTSWGLPQQQGACVPEGIALALRCR-----------AMGPW---- 302

Query: 148 GAKEKKRLSASQARLRSHLQPGAYCQAPGPGPHHQQRPRP 187
              E++  SA+               +PGPGPH + RP P
Sbjct: 303 ---EEQNWSATSG-------------SPGPGPHPRSRPTP 326


>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
          Length = 2240

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 28/158 (17%)

Query: 126 CRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPHHQQRP 185
           C GQVP+   A +   P        +K++LSAS  +     +  +    P P    +  P
Sbjct: 856 CTGQVPS---AEDEPAP--------KKQKLSASVKKEDLKSKHDSSAPDPAPDSADEVMP 904

Query: 186 RPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQ------SSVGAGFPIR 239
             +  +A++ GLE     +  R   PG    P   GH  P   +      +S G+G    
Sbjct: 905 EAVPEVASEPGLESASHPNVDRTYFPG----PPGDGHPEPSPLEDLSPCPASCGSGVVTT 960

Query: 240 VLRRERGPLLREPHRARPPAASVSLAT-GTRPGLTPLL 276
           V    R P      R  P ++  ++A+  +RP  T ++
Sbjct: 961 VTVSGRDP------RTAPSSSCTAVASAASRPDSTHMV 992


>gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens]
          Length = 1189

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 28/158 (17%)

Query: 126 CRGQVPADHCAAEAVGPWRLGPGAKEKKRLSASQARLRSHLQPGAYCQAPGPGPHHQQRP 185
           C GQVP+   A +   P        +K++LSAS  +     +  +    P P    +  P
Sbjct: 856 CTGQVPS---AEDEPAP--------KKQKLSASVKKEDLKSKHDSSAPDPAPDSADEVMP 904

Query: 186 RPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQ------SSVGAGFPIR 239
             +  +A++ GLE     +  R   PG    P   GH  P   +      +S G+G    
Sbjct: 905 EAVPEVASEPGLESASHPNVDRTYFPG----PPGDGHPEPSPLEDLSPCPASCGSGVVTT 960

Query: 240 VLRRERGPLLREPHRARPPAASVSLAT-GTRPGLTPLL 276
           V    R P      R  P ++  ++A+  +RP  T ++
Sbjct: 961 VTVSGRDP------RTAPSSSCTAVASAASRPDSTHMV 992


>gi|169160624 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 284

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 10/90 (11%)

Query: 167 QPGAYCQAPGPGPHHQQRPRPLGSIA-----AQEGLEQLLRLSTPRATLPGARSRPQAHG 221
           +PG    +P P P    RPRP G  A     A  G  +L R   P  TL G  ++ + HG
Sbjct: 173 RPGGGAASPLPAPLLASRPRPRGRCAPDGAQAGVGASRLRRRRAPSGTLNGPYAQDK-HG 231

Query: 222 ----HVGPQESQSSVGAGFPIRVLRRERGP 247
               H    ++ + V    P +V  R  GP
Sbjct: 232 LNQVHAPAGDALTEVRTAVPGQVKPRTLGP 261


>gi|113412136 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 151

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 10/90 (11%)

Query: 167 QPGAYCQAPGPGPHHQQRPRPLGSIA-----AQEGLEQLLRLSTPRATLPGARSRPQAHG 221
           +PG    +P P P    RPRP G  A     A  G  +L R   P  TL G  ++ + HG
Sbjct: 40  RPGGGAASPLPAPLLASRPRPRGRCAPDGAQAGVGASRLRRRRAPSGTLNGPYAQDK-HG 98

Query: 222 ----HVGPQESQSSVGAGFPIRVLRRERGP 247
               H    ++ + V    P +V  R  GP
Sbjct: 99  LNQVHAPAGDALTEVRTAVPGQVKPRTLGP 128


>gi|113408483 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 151

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 10/90 (11%)

Query: 167 QPGAYCQAPGPGPHHQQRPRPLGSIA-----AQEGLEQLLRLSTPRATLPGARSRPQAHG 221
           +PG    +P P P    RPRP G  A     A  G  +L R   P  TL G  ++ + HG
Sbjct: 40  RPGGGAASPLPAPLLASRPRPRGRCAPDGAQAGVGASRLRRRRAPSGTLNGPYAQDK-HG 98

Query: 222 ----HVGPQESQSSVGAGFPIRVLRRERGP 247
               H    ++ + V    P +V  R  GP
Sbjct: 99  LNQVHAPAGDALTEVRTAVPGQVKPRTLGP 128


>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
          Length = 1682

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 37/115 (32%), Positives = 44/115 (38%), Gaps = 13/115 (11%)

Query: 132 ADHC---AAEAVGPWRLGPGAKEKKR--LSASQARLRSHLQPGAYCQAPGPGPHHQQRPR 186
           ADH    A E     RLGP A   ++  L A  A     L PG     P P P   + P 
Sbjct: 422 ADHYQTPALEVSHHGRLGPSAHSSRKPFLGAPAATPHLSLPPGPSSPPPPPCPRLLRPPP 481

Query: 187 PLGSI------AAQEGLEQLLRL--STPRATLPGARSRPQAHGHVGPQESQSSVG 233
           P   +      AA+E  E L  L   T     P     P   G +GP  S+ SVG
Sbjct: 482 PPAWLKGPACRAAREDGEILEELFFGTEGPPRPAPPPLPHREGFLGPPASRFSVG 536


>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 40/141 (28%), Positives = 52/141 (36%), Gaps = 17/141 (12%)

Query: 167 QPGAYCQAPGPGPHHQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQ 226
           +P A  QAP P P    RP P     +  G ++  RL     +L  +     + G  GP 
Sbjct: 299 RPSASSQAPPPPPP-PSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPL 357

Query: 227 ESQSSVGAGFPIRVLRRERGPLLREPHRARPPAASVSL---------------ATGTRPG 271
               S     P+R      GPL   P  +R  + S +L                +G RP 
Sbjct: 358 PPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPP 417

Query: 272 LTPLLPSYWALTPGPAPSRLI 292
           L P  PS  A  P P PS  I
Sbjct: 418 LPPDRPSAGA-PPPPPPSTSI 437


>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 40/141 (28%), Positives = 52/141 (36%), Gaps = 17/141 (12%)

Query: 167 QPGAYCQAPGPGPHHQQRPRPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQ 226
           +P A  QAP P P    RP P     +  G ++  RL     +L  +     + G  GP 
Sbjct: 299 RPSASSQAPPPPPP-PSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPL 357

Query: 227 ESQSSVGAGFPIRVLRRERGPLLREPHRARPPAASVSL---------------ATGTRPG 271
               S     P+R      GPL   P  +R  + S +L                +G RP 
Sbjct: 358 PPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPP 417

Query: 272 LTPLLPSYWALTPGPAPSRLI 292
           L P  PS  A  P P PS  I
Sbjct: 418 LPPDRPSAGA-PPPPPPSTSI 437


>gi|145580575 C-terminal binding protein 2 isoform 2 [Homo sapiens]
          Length = 985

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 6/116 (5%)

Query: 186 RPLGSIAAQEGLEQLLRLSTPRATLPGARSRPQAHGHVGPQESQSSVGAGFPIRVLRRER 245
           R L  +A     E  LR       LP ARS   +H         +S+GA  P++      
Sbjct: 340 RVLSRLANSCRTEMQLRRQDRGGPLPRARSSSFSHRSELLHGDLASLGAAAPLQTASPRA 399

Query: 246 GPLLREPHRARPPAASVSLATGTRPGL---TPLLPS---YWALTPGPAPSRLISTY 295
           G   R P  A       + AT + PG+    P  PS   Y + TP    +RL  TY
Sbjct: 400 GDPARRPSSAPSQHLLETAATYSAPGVGTHAPHFPSNSGYSSPTPCALTARLSPTY 455


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,432,752
Number of Sequences: 37866
Number of extensions: 876942
Number of successful extensions: 3625
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 170
Number of HSP's that attempted gapping in prelim test: 3470
Number of HSP's gapped (non-prelim): 345
length of query: 303
length of database: 18,247,518
effective HSP length: 102
effective length of query: 201
effective length of database: 14,385,186
effective search space: 2891422386
effective search space used: 2891422386
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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