Guide to the Human Genome
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Name: FLJ33544 Sequence: fasta or formatted (235aa) NCBI GI: 113428936
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {235aa} PREDICTED: hypothetical protein
alt prot {235aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6         25           3
 C cysteine            1.7          4           1
 D aspartate           3.0          7           1
 E glutamate           2.6          6           1
 F phenylalanine       2.6          6           1
 G glycine             9.8         23           2
 H histidine           1.7          4           1
 I isoleucine          3.0          7           1
 K lysine              3.8          9           2
 L leucine             6.8         16           2
 M methionine          0.9          2           1
 N asparagine          1.7          4           1
 P proline            15.3         36           2
 Q glutamine           5.1         12           2
 R arginine           10.6         25           2
 S serine             11.1         26           2
 T threonine           4.3         10           2
 V valine              2.6          6           1
 W tryptophan          1.3          3           1
 Y tyrosine            1.7          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
FLJ33544              0.991   PREDICTED: hypothetical protein 
FLJ33544              0.981   PREDICTED: hypothetical protein 
LOC100130360          0.047   PREDICTED: hypothetical protein 
SFPQ                  0.032   splicing factor proline/glutamine rich (polypyrimidin...
FLJ22184              0.030   PREDICTED: hypothetical protein FLJ22184 
LOC100291737          0.028   PREDICTED: hypothetical protein XP_002345024 
LOC100290757          0.028   PREDICTED: hypothetical protein XP_002347750 
LOC100289291          0.028   PREDICTED: hypothetical protein XP_002343521 
EGR4                  0.028   early growth response 4 
MED15                 0.028   mediator complex subunit 15 isoform a 
TULP4                 0.026   tubby like protein 4 isoform 1 
RIMBP3B               0.026   RIMS binding protein 3B 
RIMBP3C               0.026   RIMS binding protein 3C 
TNS1                  0.026   tensin 
RIMBP3                0.026   DKFZP434H0735 protein 
MBD6                  0.026   methyl-CpG binding domain protein 6 
LOC100293865          0.024   PREDICTED: hypothetical protein 
LOC100289975          0.024   PREDICTED: hypothetical protein XP_002347602 
LOC100288043          0.024   PREDICTED: hypothetical protein XP_002343426 
CABP1                 0.024   calcium binding protein 1 isoform 3 
LOC100293980          0.024   PREDICTED: hypothetical protein 
LOC100290741          0.022   PREDICTED: hypothetical protein XP_002346521 
LOC100288445          0.022   PREDICTED: hypothetical protein XP_002342359 
MLL2                  0.022   myeloid/lymphoid or mixed-lineage leukemia 2 
ATXN2L                0.022   ataxin 2 related protein isoform C 
GLTSCR1               0.022   glioma tumor suppressor candidate region gene 1 [Ho...
ATXN2L                0.022   ataxin 2 related protein isoform E 
ATXN2L                0.019   ataxin 2 related protein isoform B 
ATXN2L                0.019   ataxin 2 related protein isoform A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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