CCDC88C 4701

Name: CCDC88C	Sequence: fasta or formatted (2028aa)		NCBI GI: 148762940
Description: DVL-binding protein DAPLE		Referenced in: Coiled-Coil Proteins Tubulins and Microtubules
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 161 4 C cysteine 1.0 20 1 D aspartate 4.6 93 2 E glutamate 11.6 235 3 F phenylalanine 1.3 26 1 G glycine 4.5 91 2 H histidine 2.8 57 2 I isoleucine 2.2 45 2 K lysine 7.1 145 3 L leucine 13.6 275 3 M methionine 1.5 31 1 N asparagine 3.9 80 2 P proline 4.9 100 3 Q glutamine 7.1 143 2 R arginine 7.0 141 2 S serine 8.5 173 3 T threonine 5.0 102 3 V valine 3.7 75 1 W tryptophan 0.5 11 1 Y tyrosine 1.2 24 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 DVL-binding protein DAPLE CCDC88A 0.402 coiled-coil domain containing 88A isoform 2 CCDC88A 0.398 coiled-coil domain containing 88A isoform 1 CCDC88B 0.124 coiled-coil domain containing 88 CENPF 0.040 centromere protein F HOOK3 0.038 golgi-associated microtubule-binding protein HOOK3 [... CEP250 0.037 centrosomal protein 2 MYH14 0.037 myosin, heavy chain 14 isoform 1 MYH14 0.037 myosin, heavy chain 14 isoform 2 MYH14 0.037 myosin, heavy chain 14 isoform 3 MYH10 0.037 myosin, heavy polypeptide 10, non-muscle GCC2 0.037 GRIP and coiled-coil domain-containing 2 MYH3 0.037 myosin, heavy chain 3, skeletal muscle, embryonic [H... NUMA1 0.037 nuclear mitotic apparatus protein 1 MYH11 0.036 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.036 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... CENPE 0.036 centromere protein E PLEC1 0.036 plectin 1 isoform 11 PLEC1 0.036 plectin 1 isoform 10 PLEC1 0.036 plectin 1 isoform 8 PLEC1 0.036 plectin 1 isoform 7 PLEC1 0.036 plectin 1 isoform 6 PLEC1 0.036 plectin 1 isoform 3 PLEC1 0.036 plectin 1 isoform 2 PLEC1 0.036 plectin 1 isoform 1 MYH6 0.036 myosin heavy chain 6 MYH7 0.036 myosin, heavy chain 7, cardiac muscle, beta EEA1 0.036 early endosome antigen 1, 162kD MYH9 0.036 myosin, heavy polypeptide 9, non-muscle TRIP11 0.036 thyroid hormone receptor interactor 11 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.