Guide to the Human Genome
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Name: CTBP2 Sequence: fasta or formatted (985aa) NCBI GI: 145580575
Description:

C-terminal binding protein 2 isoform 2

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [445aa] C-terminal binding protein 2 isoform 1
alt prot [445aa] C-terminal binding protein 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.5        113           3
 C cysteine            1.1         11           1
 D aspartate           3.9         38           1
 E glutamate           5.6         55           2
 F phenylalanine       2.2         22           2
 G glycine             8.1         80           2
 H histidine           2.7         27           2
 I isoleucine          4.0         39           2
 K lysine              2.1         21           1
 L leucine             8.7         86           2
 M methionine          1.5         15           2
 N asparagine          3.0         30           1
 P proline            10.1         99           2
 Q glutamine           4.5         44           2
 R arginine            7.6         75           2
 S serine              8.0         79           3
 T threonine           5.5         54           1
 V valine              5.6         55           2
 W tryptophan          0.8          8           1
 Y tyrosine            3.5         34           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   C-terminal binding protein 2 isoform 2 
CTBP2                 0.423   C-terminal binding protein 2 isoform 1 
CTBP2                 0.423   C-terminal binding protein 2 isoform 1 
CTBP1                 0.355   C-terminal binding protein 1 isoform 2 
CTBP1                 0.355   C-terminal binding protein 1 isoform 1 
PHGDH                 0.057   phosphoglycerate dehydrogenase 
GRHPR                 0.031   glyoxylate reductase/hydroxypyruvate reductase 
TNS1                  0.018   tensin 
FLJ22184              0.017   PREDICTED: hypothetical protein LOC80164 
FLJ22184              0.012   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.012   PREDICTED: hypothetical protein FLJ22184 
CNOT3                 0.011   CCR4-NOT transcription complex, subunit 3 
NACA                  0.011   nascent polypeptide-associated complex alpha subuni...
PLXNB1                0.010   plexin B1 
PLXNB1                0.010   plexin B1 
ABI3BP                0.010   ABI gene family, member 3 (NESH) binding protein [Ho...
PRG4                  0.010   proteoglycan 4 isoform D 
PRG4                  0.010   proteoglycan 4 isoform C 
PRG4                  0.010   proteoglycan 4 isoform B 
PRG4                  0.010   proteoglycan 4 isoform A 
RERE                  0.010   atrophin-1 like protein isoform b 
RERE                  0.010   atrophin-1 like protein isoform a 
RERE                  0.010   atrophin-1 like protein isoform a 
MUC2                  0.010   mucin 2 precursor 
TRIOBP                0.010   TRIO and F-actin binding protein isoform 6 
WNK2                  0.009   WNK lysine deficient protein kinase 2 
TENC1                 0.009   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.009   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.009   tensin like C1 domain containing phosphatase isoform...
MBD6                  0.009   methyl-CpG binding domain protein 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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