Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 239756083

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239756083 PREDICTED: hypothetical protein [Homo sapiens]
         (174 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756083 PREDICTED: hypothetical protein [Homo sapiens]           363   e-101
gi|239750612 PREDICTED: hypothetical protein [Homo sapiens]           363   e-101
gi|239744919 PREDICTED: hypothetical protein XP_002343307 [Homo ...   363   e-101
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom...    49   2e-06
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom...    49   2e-06
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     47   6e-06
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    47   1e-05
gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo sapi...    46   2e-05
gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo sapi...    46   2e-05
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ...    45   2e-05
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ...    45   2e-05
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]            45   2e-05
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]          45   2e-05
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]       45   3e-05
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]       45   3e-05
gi|50345997 E1A binding protein p300 [Homo sapiens]                    45   4e-05
gi|119220552 sidekick 1 [Homo sapiens]                                 44   5e-05
gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens]     44   9e-05
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]           44   9e-05
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]           44   9e-05
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]           44   9e-05
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]      43   1e-04
gi|147903292 nuclear localized factor 1 [Homo sapiens]                 43   1e-04
gi|153792074 proline rich 12 [Homo sapiens]                            43   2e-04
gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo ...    42   3e-04
gi|4507917 WEE1 tyrosine kinase isoform 1 [Homo sapiens]               42   3e-04
gi|153251245 hypothetical protein LOC55150 [Homo sapiens]              42   3e-04
gi|163965366 nascent polypeptide-associated complex alpha subuni...    42   3e-04
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho...    42   4e-04
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho...    42   4e-04

>gi|239756083 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 174

 Score =  363 bits (933), Expect = e-101
 Identities = 174/174 (100%), Positives = 174/174 (100%)

Query: 1   MIPVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLL 60
           MIPVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLL
Sbjct: 1   MIPVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLL 60

Query: 61  ARPGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSGGFPGSRTP 120
           ARPGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSGGFPGSRTP
Sbjct: 61  ARPGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSGGFPGSRTP 120

Query: 121 RAAERTIGPGRRGAPGRRTGPLRENSLPVLRPGVGQTGTAPLARGSRGAGRSPC 174
           RAAERTIGPGRRGAPGRRTGPLRENSLPVLRPGVGQTGTAPLARGSRGAGRSPC
Sbjct: 121 RAAERTIGPGRRGAPGRRTGPLRENSLPVLRPGVGQTGTAPLARGSRGAGRSPC 174


>gi|239750612 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 174

 Score =  363 bits (933), Expect = e-101
 Identities = 174/174 (100%), Positives = 174/174 (100%)

Query: 1   MIPVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLL 60
           MIPVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLL
Sbjct: 1   MIPVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLL 60

Query: 61  ARPGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSGGFPGSRTP 120
           ARPGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSGGFPGSRTP
Sbjct: 61  ARPGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSGGFPGSRTP 120

Query: 121 RAAERTIGPGRRGAPGRRTGPLRENSLPVLRPGVGQTGTAPLARGSRGAGRSPC 174
           RAAERTIGPGRRGAPGRRTGPLRENSLPVLRPGVGQTGTAPLARGSRGAGRSPC
Sbjct: 121 RAAERTIGPGRRGAPGRRTGPLRENSLPVLRPGVGQTGTAPLARGSRGAGRSPC 174


>gi|239744919 PREDICTED: hypothetical protein XP_002343307 [Homo
           sapiens]
          Length = 174

 Score =  363 bits (933), Expect = e-101
 Identities = 174/174 (100%), Positives = 174/174 (100%)

Query: 1   MIPVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLL 60
           MIPVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLL
Sbjct: 1   MIPVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLL 60

Query: 61  ARPGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSGGFPGSRTP 120
           ARPGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSGGFPGSRTP
Sbjct: 61  ARPGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSGGFPGSRTP 120

Query: 121 RAAERTIGPGRRGAPGRRTGPLRENSLPVLRPGVGQTGTAPLARGSRGAGRSPC 174
           RAAERTIGPGRRGAPGRRTGPLRENSLPVLRPGVGQTGTAPLARGSRGAGRSPC
Sbjct: 121 RAAERTIGPGRRGAPGRRTGPLRENSLPVLRPGVGQTGTAPLARGSRGAGRSPC 174


>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
           sapiens]
          Length = 1487

 Score = 48.9 bits (115), Expect = 2e-06
 Identities = 59/203 (29%), Positives = 76/203 (37%), Gaps = 36/203 (17%)

Query: 3   PVGSSPPWPLAPASGPGRP--PERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLL 60
           P  + PP P+ PA GPG P  P  K    P    A+ P   +G R         G A   
Sbjct: 350 PGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTG--ARGPEGAQGPRGEPGTPGSPGPAGAS 407

Query: 61  ARPGT-GRPRRSPRSRSQSVVRVAPPVSPRAPP------LPLRPRLEL------------ 101
             PGT G P     + +  +        PR PP       PL P+ +             
Sbjct: 408 GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQ 467

Query: 102 --QGCPGPGDTSG-----GFPGSRTPRAAERTIG----PGRRGAPGRRTGPLRENSLPVL 150
             +G PGP    G     G  G R  R     +G    PG RGAPG R  P  ++ L   
Sbjct: 468 GPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFP-GQDGLAGP 526

Query: 151 RPGVGQTGTAPLARGSRGAGRSP 173
           +   G+ G + LA G +GA   P
Sbjct: 527 KGAPGERGPSGLA-GPKGANGDP 548



 Score = 34.3 bits (77), Expect = 0.056
 Identities = 50/187 (26%), Positives = 59/187 (31%), Gaps = 34/187 (18%)

Query: 3    PVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLAR 62
            P    PP    PA   G+  +R +  A        P   RG++       P G+      
Sbjct: 1067 PGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQ---GPQGPRGDKGEAGE 1123

Query: 63   PGT-------------GRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRP--RLELQGCPGP 107
            PG              G P     S  Q     A P  PR PP P+ P  +    G PGP
Sbjct: 1124 PGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGP 1183

Query: 108  GDTSGGFPGSRTPRAAERTIG-PGRRGAPGRRTGPLRENSLPVLRPGVGQTGTAPLARGS 166
                 G PG R         G PG  G PG           P   PG G   +A    G 
Sbjct: 1184 ----IGPPGPRGRSGETGPAGPPGNPGPPG-----------PPGPPGPGIDMSAFAGLGP 1228

Query: 167  RGAGRSP 173
            R  G  P
Sbjct: 1229 REKGPDP 1235



 Score = 33.1 bits (74), Expect = 0.12
 Identities = 55/205 (26%), Positives = 66/205 (32%), Gaps = 53/205 (25%)

Query: 9   PWPLAPASGP-------GRPPERKDLVAPPDPTA-------QSPRVLRGLRLLAHRCPPS 54
           P  LA ASG        G P + KD+V P  P         Q PR  RG +       P 
Sbjct: 90  PTDLATASGQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPR 149

Query: 55  GEAKLLARPGTGRPRRSP-----------------------RSRSQSVVRVAP--PVSPR 89
           G       PG   P   P                          +Q  V   P  P+ PR
Sbjct: 150 GRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPR 209

Query: 90  APPLPLRPRLELQGCPGPGDTSGGFPGSRTPRAAERTIGP-GRRGAPGRRTGPLRENSLP 148
            PP P        G PGP     GF G+          GP G RG PG    P  +    
Sbjct: 210 GPPGP-------AGAPGP----QGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAG 258

Query: 149 VLRPGVGQTGTAPLARGSRGAGRSP 173
             +PG       P  +G+RG   +P
Sbjct: 259 --KPGKAGERGPPGPQGARGFPGTP 281



 Score = 32.3 bits (72), Expect = 0.21
 Identities = 53/204 (25%), Positives = 66/204 (32%), Gaps = 49/204 (24%)

Query: 3   PVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLR----------LLAHRCP 52
           P  S P  P  P   PG+P +  +   P     + P   +G R          +  HR  
Sbjct: 233 PGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGY 292

Query: 53  P-----------------SGEAKLLARPGTGRPRRSPRSRSQSVVRVAPPV-------SP 88
           P                 SG       PG   PR  P  R ++    A           P
Sbjct: 293 PGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGP 352

Query: 89  RAPPLPLRPRLELQGCPGPGDTSG--GFPGSRTPRAAERTIG-PGRRGAPGRRTGPLREN 145
             PP P+ P     G PG     G  G  G+R P  A+   G PG  G+PG         
Sbjct: 353 AGPPGPVGP-AGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPG--------- 402

Query: 146 SLPVLRPGVGQTGTAPLARGSRGA 169
             P    G   T   P A+GS GA
Sbjct: 403 --PAGASGNPGTDGIPGAKGSAGA 424



 Score = 32.3 bits (72), Expect = 0.21
 Identities = 49/187 (26%), Positives = 61/187 (32%), Gaps = 44/187 (23%)

Query: 15   ASGPGRPPERKDLVAPPDPTAQS----PRVLRGLRLLAHRCPPSGEAKLLARPGTGRPRR 70
            A+G   PP       PP P   S    P+  RG          SG       PG   P  
Sbjct: 901  AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARG---------DSGPPGRAGEPGLQGPAG 951

Query: 71   SPRSRSQSVVRVAPPVSPRAPPLPL--------------RPRLELQGCPGPGDTSG--GF 114
             P  + +       P     PP P               R      G PGP    G  G 
Sbjct: 952  PPGEKGEP--GDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGA 1009

Query: 115  PGSRTPRAAERTIGP----------GRRGAPGRRTGPLRENSLPVLRPGVGQTGT--APL 162
            PG+   R     +GP          GR G+PG    P R+ +  V +   G+TG   AP 
Sbjct: 1010 PGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGV-KGDRGETGAVGAPG 1068

Query: 163  ARGSRGA 169
            A G  G+
Sbjct: 1069 APGPPGS 1075



 Score = 28.5 bits (62), Expect = 3.1
 Identities = 45/169 (26%), Positives = 53/169 (31%), Gaps = 20/169 (11%)

Query: 9   PWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLARPGTGRP 68
           P P  P   PG   E     A  +P    P    G R         G      + G   P
Sbjct: 473 PGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGER------GAPGNRGFPGQDGLAGP 526

Query: 69  RRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLE----LQGCPGPGDTSGGFPGSRTPRAAE 124
           + +P  R  S +   P  +   P  P  P L     L G PG     G    S  P    
Sbjct: 527 KGAPGERGPSGL-AGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDG 585

Query: 125 RTIGPGRRGAPGRR-----TGPLRENSLPVLRPGVGQTGTAPLARGSRG 168
           R   PG +GA G+       GP   N      PG       P A G RG
Sbjct: 586 RPGPPGPQGARGQPGVMGFPGPKGANG----EPGKAGEKGLPGAPGLRG 630


>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
           sapiens]
          Length = 1418

 Score = 48.9 bits (115), Expect = 2e-06
 Identities = 59/203 (29%), Positives = 76/203 (37%), Gaps = 36/203 (17%)

Query: 3   PVGSSPPWPLAPASGPGRP--PERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLL 60
           P  + PP P+ PA GPG P  P  K    P    A+ P   +G R         G A   
Sbjct: 281 PGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTG--ARGPEGAQGPRGEPGTPGSPGPAGAS 338

Query: 61  ARPGT-GRPRRSPRSRSQSVVRVAPPVSPRAPP------LPLRPRLEL------------ 101
             PGT G P     + +  +        PR PP       PL P+ +             
Sbjct: 339 GNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQ 398

Query: 102 --QGCPGPGDTSG-----GFPGSRTPRAAERTIG----PGRRGAPGRRTGPLRENSLPVL 150
             +G PGP    G     G  G R  R     +G    PG RGAPG R  P  ++ L   
Sbjct: 399 GPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFP-GQDGLAGP 457

Query: 151 RPGVGQTGTAPLARGSRGAGRSP 173
           +   G+ G + LA G +GA   P
Sbjct: 458 KGAPGERGPSGLA-GPKGANGDP 479



 Score = 34.3 bits (77), Expect = 0.056
 Identities = 50/187 (26%), Positives = 59/187 (31%), Gaps = 34/187 (18%)

Query: 3    PVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLAR 62
            P    PP    PA   G+  +R +  A        P   RG++       P G+      
Sbjct: 998  PGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQ---GPQGPRGDKGEAGE 1054

Query: 63   PGT-------------GRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRP--RLELQGCPGP 107
            PG              G P     S  Q     A P  PR PP P+ P  +    G PGP
Sbjct: 1055 PGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGP 1114

Query: 108  GDTSGGFPGSRTPRAAERTIG-PGRRGAPGRRTGPLRENSLPVLRPGVGQTGTAPLARGS 166
                 G PG R         G PG  G PG           P   PG G   +A    G 
Sbjct: 1115 ----IGPPGPRGRSGETGPAGPPGNPGPPG-----------PPGPPGPGIDMSAFAGLGP 1159

Query: 167  RGAGRSP 173
            R  G  P
Sbjct: 1160 REKGPDP 1166



 Score = 32.3 bits (72), Expect = 0.21
 Identities = 53/204 (25%), Positives = 66/204 (32%), Gaps = 49/204 (24%)

Query: 3   PVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLR----------LLAHRCP 52
           P  S P  P  P   PG+P +  +   P     + P   +G R          +  HR  
Sbjct: 164 PGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGY 223

Query: 53  P-----------------SGEAKLLARPGTGRPRRSPRSRSQSVVRVAPPV-------SP 88
           P                 SG       PG   PR  P  R ++    A           P
Sbjct: 224 PGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGP 283

Query: 89  RAPPLPLRPRLELQGCPGPGDTSG--GFPGSRTPRAAERTIG-PGRRGAPGRRTGPLREN 145
             PP P+ P     G PG     G  G  G+R P  A+   G PG  G+PG         
Sbjct: 284 AGPPGPVGP-AGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPG--------- 333

Query: 146 SLPVLRPGVGQTGTAPLARGSRGA 169
             P    G   T   P A+GS GA
Sbjct: 334 --PAGASGNPGTDGIPGAKGSAGA 355



 Score = 32.3 bits (72), Expect = 0.21
 Identities = 49/187 (26%), Positives = 61/187 (32%), Gaps = 44/187 (23%)

Query: 15   ASGPGRPPERKDLVAPPDPTAQS----PRVLRGLRLLAHRCPPSGEAKLLARPGTGRPRR 70
            A+G   PP       PP P   S    P+  RG          SG       PG   P  
Sbjct: 832  AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARG---------DSGPPGRAGEPGLQGPAG 882

Query: 71   SPRSRSQSVVRVAPPVSPRAPPLPL--------------RPRLELQGCPGPGDTSG--GF 114
             P  + +       P     PP P               R      G PGP    G  G 
Sbjct: 883  PPGEKGEP--GDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGA 940

Query: 115  PGSRTPRAAERTIGP----------GRRGAPGRRTGPLRENSLPVLRPGVGQTGT--APL 162
            PG+   R     +GP          GR G+PG    P R+ +  V +   G+TG   AP 
Sbjct: 941  PGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGV-KGDRGETGAVGAPG 999

Query: 163  ARGSRGA 169
            A G  G+
Sbjct: 1000 APGPPGS 1006



 Score = 28.5 bits (62), Expect = 3.1
 Identities = 45/169 (26%), Positives = 53/169 (31%), Gaps = 20/169 (11%)

Query: 9   PWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLARPGTGRP 68
           P P  P   PG   E     A  +P    P    G R         G      + G   P
Sbjct: 404 PGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGER------GAPGNRGFPGQDGLAGP 457

Query: 69  RRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLE----LQGCPGPGDTSGGFPGSRTPRAAE 124
           + +P  R  S +   P  +   P  P  P L     L G PG     G    S  P    
Sbjct: 458 KGAPGERGPSGL-AGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDG 516

Query: 125 RTIGPGRRGAPGRR-----TGPLRENSLPVLRPGVGQTGTAPLARGSRG 168
           R   PG +GA G+       GP   N      PG       P A G RG
Sbjct: 517 RPGPPGPQGARGQPGVMGFPGPKGANG----EPGKAGEKGLPGAPGLRG 561


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 47.4 bits (111), Expect = 6e-06
 Identities = 56/182 (30%), Positives = 69/182 (37%), Gaps = 16/182 (8%)

Query: 3   PVGSSPPWPLAPASGPGRPPERKDLVA----PPDPTAQSPRVLRGLRLLAHRCPPSGEAK 58
           P    PP P+A A+ P R P      A     P P    PR  R   L A   PP+  A 
Sbjct: 131 PAPPPPPAPVA-AAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAP--PPAPAAP 187

Query: 59  LLARPGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDT--SGGFPG 116
               P  G  R  P + +     + PP  P APP   +P       P  G    +GG   
Sbjct: 188 PAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAAR 247

Query: 117 SRTPRAAERTIGPGRRGAPGRRT-----GPLRENSLPVLRPGVGQTGTAPLARGSRGAGR 171
             + R   R +G G  GA GR T     G L E +    R    + G   L RG R  GR
Sbjct: 248 PVSLREVVRYLG-GSGGAGGRLTRGRVQGLLEEEAAARGRLERTRLGALALPRGDR-PGR 305

Query: 172 SP 173
           +P
Sbjct: 306 AP 307


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 36/115 (31%), Positives = 48/115 (41%), Gaps = 13/115 (11%)

Query: 66  GRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGP------GDTSGGFPGSRT 119
           G   R+P +R+  ++   PP SPR PP      L + G  G        + +GG  G+  
Sbjct: 11  GAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATI 70

Query: 120 PRAAERTIGPGRRGAP-----GRRTGPLRENSL-PVLRPGVGQTGTAPLARGSRG 168
           P +A R  GP R   P     G R  P +  S  PV  PG     T P   G +G
Sbjct: 71  PESAPRA-GPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKG 124



 Score = 40.0 bits (92), Expect = 0.001
 Identities = 55/180 (30%), Positives = 66/180 (36%), Gaps = 26/180 (14%)

Query: 3   PVGSSPPW---PLAPASGPGRPPERKDLVAPPDPTA----QSPRVLRGLRLLAHRCPPSG 55
           P  ++PP    P  PAS PG+ P       P  P A    Q+P VL    L     PP  
Sbjct: 482 PALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPP-- 539

Query: 56  EAKLLARPGTGRPRRSPR---SRSQSVVRVAPPVSPRAPPLPLR-PRLELQGCPGPGDTS 111
                A P    PRR P      S S  R+   ++P  PP P R P   L G    G +S
Sbjct: 540 -----ASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSS 594

Query: 112 GGFPGSRTPRAAERTIGPGRRGAPGRRTGPLRENSLPVLRPGVGQTGTAP--LARGSRGA 169
                + TP    R    G  G  G    P  +  L    P     G AP    RG+ GA
Sbjct: 595 S---ATSTPEEL-RGYDSGPEG--GAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGA 648



 Score = 36.2 bits (82), Expect = 0.015
 Identities = 54/221 (24%), Positives = 68/221 (30%), Gaps = 57/221 (25%)

Query: 5   GSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLAR-- 62
           G   P     + GP   P R      P P  Q     +GLR+ A      G+A    +  
Sbjct: 91  GERAPPAKNTSPGPVSSPGRASGTTRPGPLGQ-----KGLRISAEETVARGKATEAPKRS 145

Query: 63  --------------PGTGRPRRSPRSRSQ----SVVRVAPPVSPRAP------------- 91
                         PGT  P  + RSR+      + R AP   PR P             
Sbjct: 146 ALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASE 205

Query: 92  -----PLPLRPRLELQGCPGPGDTSGGFPGSRTPRAAERTIGPGRRGAPGRRTGPL--RE 144
                P P   R    G       S     S TP ++    GP  RG P     P   + 
Sbjct: 206 HSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKP 265

Query: 145 NSLPVLR------------PGVGQTGTAPLARGSRGAGRSP 173
             L  LR            P +G   ++PLA  S  A  SP
Sbjct: 266 KGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSP 306



 Score = 35.4 bits (80), Expect = 0.025
 Identities = 31/110 (28%), Positives = 41/110 (37%), Gaps = 15/110 (13%)

Query: 3   PVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPP--------- 53
           P  + P   L P   P  PP    L     P+ Q+P  L    L A   PP         
Sbjct: 354 PPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPF 413

Query: 54  SGEAKLLARPGTGRPRRSPRSRSQSVVRV------APPVSPRAPPLPLRP 97
           S  A     P    P ++P S +   ++V      +PP+SP A P P  P
Sbjct: 414 SPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP 463



 Score = 34.7 bits (78), Expect = 0.043
 Identities = 39/139 (28%), Positives = 51/139 (36%), Gaps = 22/139 (15%)

Query: 3   PVGSSPPWPLAPA-SGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKL-- 59
           P   +PP   AP    P  PP    +     P  Q+P  L    L   + PP     L  
Sbjct: 427 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALAT 486

Query: 60  -----LARPGTGRPRRSPRSRSQSVVR---VAPPVSPRAPPLPLRPRLELQGCPGPGDTS 111
                L  P    P ++P S S S+       PP  P+APP+   P L++   P      
Sbjct: 487 PPLQALPSPPASFPGQAPFSPSASLPMSPLATPP--PQAPPVLAAPLLQVPPSP------ 538

Query: 112 GGFPGSRTPRAAERTIGPG 130
              P S T +A  R   PG
Sbjct: 539 ---PASPTLQAPRRPPTPG 554



 Score = 32.0 bits (71), Expect = 0.28
 Identities = 53/212 (25%), Positives = 72/212 (33%), Gaps = 46/212 (21%)

Query: 5   GSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLR-----GLRLLAHRC-------- 51
           G++   P A A G   P        PP  T  + RVL      G + LA R         
Sbjct: 11  GAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATI 70

Query: 52  ----PPSGEAKLLARPGTGRPRRSPRSRSQSVVRVAPP--VSPRAPPLPL---------- 95
               P +G  +    P +GR  R+P +++ S   V+ P   S    P PL          
Sbjct: 71  PESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAE 130

Query: 96  ----------RPRLELQGCPGPGDTSGGFPGSRTPRAAERTIGPGR-----RGAPGRRTG 140
                      P+          DTSG  PG+ +P  A R+   G      R AP  R  
Sbjct: 131 ETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPR 190

Query: 141 PLRENSLPVLRPGVGQTGT--APLARGSRGAG 170
           P  E     +      + T  +P AR    AG
Sbjct: 191 PPTEGPRKSVSSASEHSTTEPSPAARRRPSAG 222



 Score = 29.6 bits (65), Expect = 1.4
 Identities = 33/112 (29%), Positives = 40/112 (35%), Gaps = 35/112 (31%)

Query: 3   PVGSSP---PWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKL 59
           P+ SSP   P P AP S P  PP  + L +PP                    PPS     
Sbjct: 289 PLSSSPLATPSPSAPPS-PSAPPSLQTLPSPP------------------ATPPSQATTS 329

Query: 60  LARPGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRL----ELQGCPGP 107
           L          SP  ++      +PP+SP A P P  P       LQ  P P
Sbjct: 330 LG---------SPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSP 372


>gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo
           sapiens]
          Length = 678

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 46/149 (30%), Positives = 52/149 (34%), Gaps = 30/149 (20%)

Query: 30  PPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLAR---PGTGRPRRSPRSRSQSVVRVAPPV 86
           PP P A     +R   +L +  PP   ++LL R   P   R R SP        R  PP 
Sbjct: 46  PPAPPAPGAAQIRAAEVLVYGAPPGRVSRLLERFDPPAAPRRRGSPER-----ARPPPPP 100

Query: 87  SPRAPPLPLRPRLELQGCPGPGDTSGGFPGSRT---------------PRAAERTIG--- 128
            P APP P          PGP    G  PG+R                PR   R  G   
Sbjct: 101 PPPAPPRPPPAAPSPPAAPGPRG-GGASPGARRSDFLQKTGSNSFTVHPRGLHRGAGARL 159

Query: 129 -PGRRGAPGRRTGPLRENSLPVLRPGVGQ 156
                 AP  R GP   N L    PG GQ
Sbjct: 160 LSNGHSAPEPRAGP--ANRLAGSPPGSGQ 186


>gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo
           sapiens]
          Length = 650

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 46/149 (30%), Positives = 52/149 (34%), Gaps = 30/149 (20%)

Query: 30  PPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLAR---PGTGRPRRSPRSRSQSVVRVAPPV 86
           PP P A     +R   +L +  PP   ++LL R   P   R R SP        R  PP 
Sbjct: 46  PPAPPAPGAAQIRAAEVLVYGAPPGRVSRLLERFDPPAAPRRRGSPER-----ARPPPPP 100

Query: 87  SPRAPPLPLRPRLELQGCPGPGDTSGGFPGSRT---------------PRAAERTIG--- 128
            P APP P          PGP    G  PG+R                PR   R  G   
Sbjct: 101 PPPAPPRPPPAAPSPPAAPGPRG-GGASPGARRSDFLQKTGSNSFTVHPRGLHRGAGARL 159

Query: 129 -PGRRGAPGRRTGPLRENSLPVLRPGVGQ 156
                 AP  R GP   N L    PG GQ
Sbjct: 160 LSNGHSAPEPRAGP--ANRLAGSPPGSGQ 186


>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
           sapiens]
          Length = 384

 Score = 45.4 bits (106), Expect = 2e-05
 Identities = 50/179 (27%), Positives = 65/179 (36%), Gaps = 40/179 (22%)

Query: 16  SGPGRPPER-KDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLARPGTGRPRRSPRS 74
           SG   P  R +    PP P  +SP    G        PP                R  + 
Sbjct: 70  SGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPP----------------RPSQH 113

Query: 75  RSQSVVRVAPP------VSPRAPPLPLRPRLELQGCPGPGDTSGGFPGSRTPRAAERTIG 128
           +S S +R A P       S RA P P  P+   +  PG   + G  PGSR   + +    
Sbjct: 114 QSGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGAR 173

Query: 129 PGR-------------RGAPGRRTGPLRENSLPV-LRPGVGQTGTAPLARGSRGAGRSP 173
           P R             R AP R   P R   LP+  RPG   +GT   + G+ G+G  P
Sbjct: 174 PSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPG---SGTGARSCGTWGSGGGP 229


>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
           sapiens]
          Length = 384

 Score = 45.4 bits (106), Expect = 2e-05
 Identities = 50/179 (27%), Positives = 65/179 (36%), Gaps = 40/179 (22%)

Query: 16  SGPGRPPER-KDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLARPGTGRPRRSPRS 74
           SG   P  R +    PP P  +SP    G        PP                R  + 
Sbjct: 70  SGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPP----------------RPSQH 113

Query: 75  RSQSVVRVAPP------VSPRAPPLPLRPRLELQGCPGPGDTSGGFPGSRTPRAAERTIG 128
           +S S +R A P       S RA P P  P+   +  PG   + G  PGSR   + +    
Sbjct: 114 QSGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGAR 173

Query: 129 PGR-------------RGAPGRRTGPLRENSLPV-LRPGVGQTGTAPLARGSRGAGRSP 173
           P R             R AP R   P R   LP+  RPG   +GT   + G+ G+G  P
Sbjct: 174 PSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPG---SGTGARSCGTWGSGGGP 229


>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 384

 Score = 45.4 bits (106), Expect = 2e-05
 Identities = 50/179 (27%), Positives = 65/179 (36%), Gaps = 40/179 (22%)

Query: 16  SGPGRPPER-KDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLARPGTGRPRRSPRS 74
           SG   P  R +    PP P  +SP    G        PP                R  + 
Sbjct: 70  SGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPP----------------RPSQH 113

Query: 75  RSQSVVRVAPP------VSPRAPPLPLRPRLELQGCPGPGDTSGGFPGSRTPRAAERTIG 128
           +S S +R A P       S RA P P  P+   +  PG   + G  PGSR   + +    
Sbjct: 114 QSGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGAR 173

Query: 129 PGR-------------RGAPGRRTGPLRENSLPV-LRPGVGQTGTAPLARGSRGAGRSP 173
           P R             R AP R   P R   LP+  RPG   +GT   + G+ G+G  P
Sbjct: 174 PSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPG---SGTGARSCGTWGSGGGP 229


>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
          Length = 2944

 Score = 45.4 bits (106), Expect = 2e-05
 Identities = 50/162 (30%), Positives = 55/162 (33%), Gaps = 15/162 (9%)

Query: 3    PVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLAR 62
            P    PP P+ P    G   E+ D   P DP        RGLR       P GE      
Sbjct: 1618 PGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGD 1677

Query: 63   PGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSGGFPGSRTPRA 122
            PG      SP S        + P   R  P P  P   L    GPG    G PG R    
Sbjct: 1678 PGEDGRNGSPGS--------SGPKGDRGEPGPPGPPGRLVD-TGPGAREKGEPGDRGQEG 1728

Query: 123  AERTIG-PGRRGAPGRR-----TGPLRENSLPVLRPGVGQTG 158
                 G PG  GAPG R      GP      P +R   G+ G
Sbjct: 1729 PRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKG 1770



 Score = 36.2 bits (82), Expect = 0.015
 Identities = 55/188 (29%), Positives = 70/188 (37%), Gaps = 36/188 (19%)

Query: 3    PVGS--SPPWPLAPA-SGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKL 59
            PVG    P  P AP  +GP  P     L   P  T    R L G         P G + L
Sbjct: 2178 PVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTGAVGLPGPPGPSGL 2237

Query: 60   LARPG----------TGRPRRSPR--SRSQSVVRVAPPVSPRAP--PLPLRPRLELQGCP 105
            +   G          TG+P    R  +  +   R +P V P +P  P P+ P+ E     
Sbjct: 2238 VGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGV-PGSPGLPGPVGPKGEPGPTG 2296

Query: 106  GPGDTSGGFPGSRTPRAAERTIGPGRRGAPGRRTGPLRENSLPVLRPGVGQTGTAPLARG 165
             PG    G PG++           G +GAPG   G L      V  PG       P  RG
Sbjct: 2297 APGQAVVGLPGAK-----------GEKGAPGGLAGDL------VGEPGAKGDRGLPGPRG 2339

Query: 166  SRG-AGRS 172
             +G AGR+
Sbjct: 2340 EKGEAGRA 2347



 Score = 30.0 bits (66), Expect = 1.1
 Identities = 31/89 (34%), Positives = 35/89 (39%), Gaps = 11/89 (12%)

Query: 53   PSGEAKLLARPGTGRPRRSPRSRSQSVVRVAPPVSPRAPP-LPLRPRLELQGCPGPGDTS 111
            P G++     PG   P   P  R     R  P   P+ PP L L  R    G PGP   +
Sbjct: 1980 PKGDSGEQGPPGKEGPIGFPGERGLKGDRGDP--GPQGPPGLALGER----GPPGPSGLA 2033

Query: 112  G--GFPGSRTPRAAERTIGPGRRGAPGRR 138
            G  G PG   P    R  G G  G PG R
Sbjct: 2034 GEPGKPG--IPGLPGRAGGVGEAGRPGER 2060



 Score = 28.9 bits (63), Expect = 2.3
 Identities = 30/89 (33%), Positives = 34/89 (38%), Gaps = 9/89 (10%)

Query: 88   PRAPPLPLRPRLELQGCPGPGDTSGGFPGSRTPRAAERTIGPGRRGAPGRRTGPLRENSL 147
            PR  P P+      +G PG     G       P    RT  PG +G PG  T    E   
Sbjct: 1242 PRPEPCPVYCPKGQKGEPGEMGLRGQVGPPGDPGLPGRTGAPGPQGPPGSATAK-GERGF 1300

Query: 148  PVL--RPG----VGQTGT--APLARGSRG 168
            P    RPG     G  GT  AP  +GS G
Sbjct: 1301 PGADGRPGSPGRAGNPGTPGAPGLKGSPG 1329


>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
          Length = 1120

 Score = 45.1 bits (105), Expect = 3e-05
 Identities = 60/197 (30%), Positives = 71/197 (36%), Gaps = 31/197 (15%)

Query: 1   MIPVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLL 60
           M P GS  P   AP   PG P     L  PP      PR  R    L+   P  G+A+  
Sbjct: 675 MYPQGS--PSSPAPGPPPGAPWAFSYLAGPPATPPDPPRPKRRSHSLSRPGPTEGDAEGE 732

Query: 61  ARPGTG-----------RPRRSPRSR-SQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPG 108
           A    G           RP RS   R S SV       +PR+    LR R +    P P 
Sbjct: 733 AEGPVGSTLGSYATLTRRPGRSALVRTSPSVTPTPARGTPRSQSFALRARRKGPPPPPPK 792

Query: 109 DTSGGFPGSRTPRAAERTIGPGRRGAPGRRTGPLRENSLPVLRPG--------------- 153
             S     S  P   + + GP + GA G R   L E + P   PG               
Sbjct: 793 RLSSVSGPSPEPPPLDESPGP-KEGATGPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEE 851

Query: 154 VGQTGTAPLARGSRGAG 170
            G  GT P +RGS G G
Sbjct: 852 PGPEGTPP-SRGSSGEG 867



 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 43/149 (28%), Positives = 56/149 (37%), Gaps = 12/149 (8%)

Query: 3    PVGSSPPWP---LAPASGPGRPPERKDLVAPPDPTAQSPRVLRGL--RLLAHRCPPSGEA 57
            P  SS P P     PA G   P      + PP P    P +      R      PP+  A
Sbjct: 949  PPASSLPQPEPSSLPAQGVPTPLAPSPAMQPPVPPCPGPGLESSAASRWNGETEPPAAPA 1008

Query: 58   KLLARPGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPL-RPRLELQGCPGPGDTSGGFPG 116
             LL  PG G   +        +    P ++PR  P P+  PR E  G  GPG        
Sbjct: 1009 ALLKVPGAGTAPKPVSVACTQLAFSGPKLAPRLGPRPVPPPRPESTGTVGPGQAQQRLEQ 1068

Query: 117  SRTP-----RAAERTIG-PGRRGAPGRRT 139
            + +      RAAE++IG   + G P   T
Sbjct: 1069 TSSSLAAALRAAEKSIGTKEQEGTPSAST 1097


>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
          Length = 1202

 Score = 45.1 bits (105), Expect = 3e-05
 Identities = 60/197 (30%), Positives = 71/197 (36%), Gaps = 31/197 (15%)

Query: 1   MIPVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLL 60
           M P GS  P   AP   PG P     L  PP      PR  R    L+   P  G+A+  
Sbjct: 757 MYPQGS--PSSPAPGPPPGAPWAFSYLAGPPATPPDPPRPKRRSHSLSRPGPTEGDAEGE 814

Query: 61  ARPGTG-----------RPRRSPRSR-SQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPG 108
           A    G           RP RS   R S SV       +PR+    LR R +    P P 
Sbjct: 815 AEGPVGSTLGSYATLTRRPGRSALVRTSPSVTPTPARGTPRSQSFALRARRKGPPPPPPK 874

Query: 109 DTSGGFPGSRTPRAAERTIGPGRRGAPGRRTGPLRENSLPVLRPG--------------- 153
             S     S  P   + + GP + GA G R   L E + P   PG               
Sbjct: 875 RLSSVSGPSPEPPPLDESPGP-KEGATGPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEE 933

Query: 154 VGQTGTAPLARGSRGAG 170
            G  GT P +RGS G G
Sbjct: 934 PGPEGTPP-SRGSSGEG 949



 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 43/149 (28%), Positives = 56/149 (37%), Gaps = 12/149 (8%)

Query: 3    PVGSSPPWP---LAPASGPGRPPERKDLVAPPDPTAQSPRVLRGL--RLLAHRCPPSGEA 57
            P  SS P P     PA G   P      + PP P    P +      R      PP+  A
Sbjct: 1031 PPASSLPQPEPSSLPAQGVPTPLAPSPAMQPPVPPCPGPGLESSAASRWNGETEPPAAPA 1090

Query: 58   KLLARPGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPL-RPRLELQGCPGPGDTSGGFPG 116
             LL  PG G   +        +    P ++PR  P P+  PR E  G  GPG        
Sbjct: 1091 ALLKVPGAGTAPKPVSVACTQLAFSGPKLAPRLGPRPVPPPRPESTGTVGPGQAQQRLEQ 1150

Query: 117  SRTP-----RAAERTIG-PGRRGAPGRRT 139
            + +      RAAE++IG   + G P   T
Sbjct: 1151 TSSSLAAALRAAEKSIGTKEQEGTPSAST 1179


>gi|50345997 E1A binding protein p300 [Homo sapiens]
          Length = 2414

 Score = 44.7 bits (104), Expect = 4e-05
 Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 17/95 (17%)

Query: 3   PVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLAR 62
           PV + P  P  P S    PP R+    P  PT Q P+ ++          PS    L A 
Sbjct: 862 PVPTPPAMPPGPQSQALHPPPRQ---TPTPPTTQLPQQVQ----------PS----LPAA 904

Query: 63  PGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRP 97
           P   +P++ PRS+  +   V  P +P  PP P  P
Sbjct: 905 PSADQPQQQPRSQQSTAASVPTPTAPLLPPQPATP 939



 Score = 35.0 bits (79), Expect = 0.033
 Identities = 53/191 (27%), Positives = 73/191 (38%), Gaps = 51/191 (26%)

Query: 3    PVGSSPPW-PLAPASGPGRPPERKDLVAPPDP--TAQSPRVLRGLRLLAHRCPPSGEAKL 59
            P  S PP+ P   A+GP    +    V PP P  TAQ P  L G        PP    ++
Sbjct: 1879 PPNSMPPYLPRTQAAGPVSQGKAAGQVTPPTPPQTAQPP--LPG--------PPPAAVEM 1928

Query: 60   LAR----PGTGRPRRSPRSRSQSVVRVAPPVSPRAP------PLPLRPRLELQGCPGPGD 109
              +      T R     +   + +    PP++P AP      P+   P   L+  PG G 
Sbjct: 1929 AMQIQRAAETQRQMAHVQIFQRPIQHQMPPMTPMAPMGMNPPPMTRGPSGHLE--PGMGP 1986

Query: 110  TS---------GGFPG-----SRTPRAAERTIGPGRRGAPGRRTGPLRENSLPVLRPGVG 155
            T          GG P      S  PR A  ++   + G P         N  P  +PG+G
Sbjct: 1987 TGMQQQPPWSQGGLPQPQQLQSGMPRPAMMSVA--QHGQP--------LNMAP--QPGLG 2034

Query: 156  QTGTAPLARGS 166
            Q G +PL  G+
Sbjct: 2035 QVGISPLKPGT 2045


>gi|119220552 sidekick 1 [Homo sapiens]
          Length = 2213

 Score = 44.3 bits (103), Expect = 5e-05
 Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 13/80 (16%)

Query: 55  GEAKLLARPGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSG-G 113
           G A+   R G GRPR SP  R++      P ++PR  P P RPR   +     GDT+G G
Sbjct: 15  GGAEPPERAGPGRPRGSPPGRAR------PSLAPRPGPEPSRPRAAPE--TSGGDTAGAG 66

Query: 114 FPGSRTPRAAERTIGPGRRG 133
             G R  RAA+  +GPGRRG
Sbjct: 67  RCGGR--RAAK--LGPGRRG 82


>gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens]
          Length = 1669

 Score = 43.5 bits (101), Expect = 9e-05
 Identities = 45/153 (29%), Positives = 57/153 (37%), Gaps = 21/153 (13%)

Query: 7   SPPWPLAPAS----GPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLAR 62
           SP +P  P      G   P   K    PP P    P ++ G         P GE      
Sbjct: 300 SPGFPGEPGYPGLIGRQGPQGEKGEAGPPGP----PGIVIGTG-------PLGEKGERGY 348

Query: 63  PGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSG--GFPGSRTP 120
           PGT  PR  P  +    +    P  P  P LP+  +    G PG     G  GFPG+  P
Sbjct: 349 PGTPGPRGEPGPKGFPGL----PGQPGPPGLPVPGQAGAPGFPGERGEKGDRGFPGTSLP 404

Query: 121 RAAERTIGPGRRGAPGRRTGPLRENSLPVLRPG 153
             + R   PG  G+PG    P   N +   +PG
Sbjct: 405 GPSGRDGLPGPPGSPGPPGQPGYTNGIVECQPG 437



 Score = 30.0 bits (66), Expect = 1.1
 Identities = 41/146 (28%), Positives = 57/146 (39%), Gaps = 17/146 (11%)

Query: 17  GPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLARPGT-GRPRRSPRSR 75
           GP  PP   ++  P  P A+  R L G   +A    P G   L+ +PG  G P       
Sbjct: 480 GPQGPPG--EIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGLIGQPGAKGEP------- 530

Query: 76  SQSVVRVAPPVSPRAPPLPLRPRLE-LQGCPGPGDTSGGFPGSRTPRAAERTIG-PGRRG 133
            +    +        P  P +P +    G PG      G PG   P+ +  ++G  G RG
Sbjct: 531 GEFYFDLRLKGDKGDPGFPGQPGMTGRAGSPG----RDGHPGLPGPKGSPGSVGLKGERG 586

Query: 134 APGRRTGP-LRENSLPVLRPGVGQTG 158
            PG    P  R ++ P   PG G  G
Sbjct: 587 PPGGVGFPGSRGDTGPPGPPGYGPAG 612



 Score = 27.3 bits (59), Expect = 6.8
 Identities = 42/154 (27%), Positives = 60/154 (38%), Gaps = 25/154 (16%)

Query: 9    PWPLAPASGPGRPPERKDLVAPPDPTAQ------SPRVLRGLRLLAHRCPPSGEAKLLAR 62
            P    P   PG   ++ D+  P  P +       S +  +G +    +  P GE      
Sbjct: 911  PGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGD 970

Query: 63   PGT-GRPRRSPRSRS--QSVVRVAPPVS--PRAPPLPLRPR-----LELQGCPG------ 106
            PGT G P +  ++    Q   +  P +S  P AP LP  P+     + L G PG      
Sbjct: 971  PGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLP-GPKGSVGGMGLPGTPGEKGVPG 1029

Query: 107  -PGDT-SGGFPGSRTPRAAERTIGPGRRGAPGRR 138
             PG   S G PG +  +  +   GP   G PG R
Sbjct: 1030 IPGPQGSPGLPGDKGAKGEKGQAGPPGIGIPGLR 1063


>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
          Length = 460

 Score = 43.5 bits (101), Expect = 9e-05
 Identities = 54/177 (30%), Positives = 69/177 (38%), Gaps = 34/177 (19%)

Query: 4   VGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLARP 63
           +G+ P  P    S  GRP  +  L  P +  A +P+            PP       ARP
Sbjct: 177 LGNKPTPPRQEGSFGGRPKSQPPL--PQETAAPAPQP-------GPTAPP-------ARP 220

Query: 64  GTGRPRRSPRSRSQSVVRVAPPVSPRAPPLP------LRPRLELQGCPGPGDTSGGFPGS 117
                R  PR R++S  R + P  P   PLP        P  EL+    PG T+G  P  
Sbjct: 221 PAYESREGPRGRAES--RGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRP 278

Query: 118 RTPRAAER----TIGPGRRGAPGRRTGPLRENSLPVLRPGVGQTGTAPLARGSRGAG 170
           R P+AAE     T+G  RRG   R       +S P    G G+       R  RG G
Sbjct: 279 REPQAAEESGCATVGL-RRGDCDR-----AGSSQPPATSGNGERCRFCRRRRRRGGG 329


>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
          Length = 460

 Score = 43.5 bits (101), Expect = 9e-05
 Identities = 54/177 (30%), Positives = 69/177 (38%), Gaps = 34/177 (19%)

Query: 4   VGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLARP 63
           +G+ P  P    S  GRP  +  L  P +  A +P+            PP       ARP
Sbjct: 177 LGNKPTPPRQEGSFGGRPKSQPPL--PQETAAPAPQP-------GPTAPP-------ARP 220

Query: 64  GTGRPRRSPRSRSQSVVRVAPPVSPRAPPLP------LRPRLELQGCPGPGDTSGGFPGS 117
                R  PR R++S  R + P  P   PLP        P  EL+    PG T+G  P  
Sbjct: 221 PAYESREGPRGRAES--RGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRP 278

Query: 118 RTPRAAER----TIGPGRRGAPGRRTGPLRENSLPVLRPGVGQTGTAPLARGSRGAG 170
           R P+AAE     T+G  RRG   R       +S P    G G+       R  RG G
Sbjct: 279 REPQAAEESGCATVGL-RRGDCDR-----AGSSQPPATSGNGERCRFCRRRRRRGGG 329


>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
          Length = 460

 Score = 43.5 bits (101), Expect = 9e-05
 Identities = 54/177 (30%), Positives = 69/177 (38%), Gaps = 34/177 (19%)

Query: 4   VGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLARP 63
           +G+ P  P    S  GRP  +  L  P +  A +P+            PP       ARP
Sbjct: 177 LGNKPTPPRQEGSFGGRPKSQPPL--PQETAAPAPQP-------GPTAPP-------ARP 220

Query: 64  GTGRPRRSPRSRSQSVVRVAPPVSPRAPPLP------LRPRLELQGCPGPGDTSGGFPGS 117
                R  PR R++S  R + P  P   PLP        P  EL+    PG T+G  P  
Sbjct: 221 PAYESREGPRGRAES--RGSGPAQPAHLPLPGPAHSPAPPAPELREGRAPGSTAGRRPRP 278

Query: 118 RTPRAAER----TIGPGRRGAPGRRTGPLRENSLPVLRPGVGQTGTAPLARGSRGAG 170
           R P+AAE     T+G  RRG   R       +S P    G G+       R  RG G
Sbjct: 279 REPQAAEESGCATVGL-RRGDCDR-----AGSSQPPATSGNGERCRFCRRRRRRGGG 329


>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
          Length = 1466

 Score = 43.1 bits (100), Expect = 1e-04
 Identities = 59/185 (31%), Positives = 75/185 (40%), Gaps = 25/185 (13%)

Query: 8   PPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLARPG-TG 66
           P  P+ P    G+P ++ +  AP  P    PR   G R       P G A     PG  G
Sbjct: 763 PTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGER---GETGPPGPAGFPGAPGQNG 819

Query: 67  RP-----RRSPRSRSQ-SVVRVAPP---VSPRAPPLPLRPRLELQGCPGPGDTSGGFPGS 117
            P     R +P  + +     VA P     P  PP P   + E +G PG G  + GFPG+
Sbjct: 820 EPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGE-RGSPG-GPGAAGFPGA 877

Query: 118 R----TPRAAERTIGPGRRGAPGR--RTGPLRENSLPVLRPGV-GQTGTA--PLARGSRG 168
           R     P +      PG  G+PG+    GP      P   PGV G  G A  P  +GS G
Sbjct: 878 RGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPG-SPGVSGPKGDAGQPGEKGSPG 936

Query: 169 AGRSP 173
           A   P
Sbjct: 937 AQGPP 941



 Score = 40.0 bits (92), Expect = 0.001
 Identities = 54/185 (29%), Positives = 64/185 (34%), Gaps = 31/185 (16%)

Query: 2   IPVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLA 61
           +P  +  P P+ P   PG          P  P A   R   G R    +  P G      
Sbjct: 289 LPGENGAPGPMGPRGAPGERGR------PGLPGAAGARGNDGARGSDGQPGPPGP----- 337

Query: 62  RPGTGRPRRSPRSRSQSVVRVAPPVSP--------RAPPLPLRPRLELQGCPGPGDTSGG 113
            PGT     SP ++ +    V P  SP        R  P P +     QG PGP   +G 
Sbjct: 338 -PGTAGFPGSPGAKGE----VGPAGSPGSNGAPGQRGEPGP-QGHAGAQGPPGPPGINGS 391

Query: 114 FPGSRTPRAAERTIGPGRRGAPGRRTGPLRENSLPVLRPGVGQTGT-----APLARGSRG 168
             G      A     PG  GA G   GP   N  P LR G G+ G       P  RG RG
Sbjct: 392 PGGKGEMGPAGIPGAPGLMGARGP-PGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERG 450

Query: 169 AGRSP 173
               P
Sbjct: 451 EAGIP 455



 Score = 33.5 bits (75), Expect = 0.095
 Identities = 52/196 (26%), Positives = 61/196 (31%), Gaps = 51/196 (26%)

Query: 8   PPWPLAPASG--PGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLARPGT 65
           P  P  P S   PG P  + +   P  P    PR   G+  +    P   +      PG 
Sbjct: 539 PGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGV--MGFPGPKGNDGA----PGK 592

Query: 66  GRPRRSPRSRSQSVVRVAPP-----VSPRAPPLPLRPRLE-----------LQGCPGPGD 109
              R  P           PP       P+ PP P  P  +           LQG PG G 
Sbjct: 593 NGERGGPGGPGPQ----GPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGG 648

Query: 110 TSG--GFPGSRTPRAAERTIG----------PGRRGAPGRRTGPLRENSLPVLRPGVGQT 157
             G  G PG   P+      G          PG RG PG           P LR G G  
Sbjct: 649 PPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLA-------GAPGLRGGAGPP 701

Query: 158 GTAPLARGSRGAGRSP 173
           G      G +GA   P
Sbjct: 702 G----PEGGKGAAGPP 713



 Score = 32.7 bits (73), Expect = 0.16
 Identities = 51/160 (31%), Positives = 59/160 (36%), Gaps = 31/160 (19%)

Query: 4   VGSSPPWPLAPASG-PGRPPERKDLVAPPDPTAQSPRVLRGLR-LLAHRC--PPSGEAKL 59
           +G S P      SG PGRP ER     P  P  + P  + G   +  HR     +GE   
Sbjct: 221 IGPSGPAGKDGESGRPGRPGERG---LPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGE 277

Query: 60  LARPGTGRPRRSPRSRSQSVVRVAP-PVSPR-APPLPLRPRLE-------------LQGC 104
              PG       P          AP P+ PR AP    RP L                G 
Sbjct: 278 TGAPGLKGENGLPGENG------APGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQ 331

Query: 105 PGPGDTSG--GFPGSRTPRAAERTIG-PGRRGAPGRRTGP 141
           PGP    G  GFPGS   +      G PG  GAPG+R  P
Sbjct: 332 PGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEP 371



 Score = 31.6 bits (70), Expect = 0.36
 Identities = 36/124 (29%), Positives = 43/124 (34%), Gaps = 11/124 (8%)

Query: 17  GPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLARPGTGRPRRSPRSRS 76
           GP  P   K    PP P        +GL+ L     P GE      PG      +P +  
Sbjct: 621 GPTGPGGDKGDTGPPGP--------QGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPG 672

Query: 77  QSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSGGFPGSRTPRAAERTIGPGRRGAPG 136
                 AP    R PP  L     L+G  GP    GG   +  P        PG +G PG
Sbjct: 673 GKGDAGAP--GERGPP-GLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPG 729

Query: 137 RRTG 140
            R G
Sbjct: 730 ERGG 733



 Score = 31.2 bits (69), Expect = 0.47
 Identities = 51/197 (25%), Positives = 62/197 (31%), Gaps = 50/197 (25%)

Query: 3    PVGSSPPWPLAPA-----------SGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRC 51
            P    PP P+ PA           +GP   P        P P  Q PR  +G        
Sbjct: 1046 PGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGP--QGPRGDKGETGERGAA 1103

Query: 52   PPSGEAKLLARPGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTS 111
               G       PG   P     +  Q  +    P  PR P  P  P       PG   TS
Sbjct: 1104 GIKGHRGFPGNPGA--PGSPGPAGQQGAIGSPGPAGPRGPVGPSGP-------PGKDGTS 1154

Query: 112  G--------GFPGSRTPRAAERTIG-------PGRRGAPGRRTGPLRENSLPVLRPGVGQ 156
            G        G  G+R  R +E + G       PG  GAPG   G            GVG 
Sbjct: 1155 GHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCG------------GVGA 1202

Query: 157  TGTAPLARGSRGAGRSP 173
               A +  G +  G +P
Sbjct: 1203 AAIAGIG-GEKAGGFAP 1218



 Score = 30.4 bits (67), Expect = 0.81
 Identities = 39/139 (28%), Positives = 44/139 (31%), Gaps = 25/139 (17%)

Query: 5   GSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLARPG 64
           G+  P        PG   ER +   P  P A+      G           GE      PG
Sbjct: 430 GAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDG---------SPGEPGANGLPG 480

Query: 65  TGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSG--GFPGSRTPRA 122
               R +P  R         P  P   P    P  E +G PGP    G  G PG      
Sbjct: 481 AAGERGAPGFRG--------PAGPNGIPGEKGPAGE-RGAPGPAGPRGAAGEPGRDGVPG 531

Query: 123 AERTIGPGRRGAPGRRTGP 141
                GPG RG PG   GP
Sbjct: 532 -----GPGMRGMPGSPGGP 545


>gi|147903292 nuclear localized factor 1 [Homo sapiens]
          Length = 369

 Score = 43.1 bits (100), Expect = 1e-04
 Identities = 62/189 (32%), Positives = 78/189 (41%), Gaps = 41/189 (21%)

Query: 2   IPVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRL---LAHRCPPSGEAK 58
           +P    P  P AP  G  RPP+        D  A+ PR  R LR+   L  R   +G ++
Sbjct: 150 VPRAPGPATPAAP--GCPRPPQ--------DALARRPRGCRLLRVPDGLLSRALRAGRSR 199

Query: 59  LLARP---GTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSGGFP 115
            L R     +G   +  R+ SQS  R AP  SP +  +P   RLE +     G  + G  
Sbjct: 200 RLTRVRSVSSGNEDKERRAGSQSPAR-APSTSPPSSRVPFPERLEAE-----GTVALGRA 253

Query: 116 GSRTPRAAERTIGPGR------------RGAPGRRTGPLRENSLPVLRPGVGQTGTAPLA 163
           G     AAE   G GR             GAPG R    R +   VLRP     GTA L 
Sbjct: 254 GDALRLAAEYCPGTGRLRLRLLRAESPAGGAPGPRAVSCRLSL--VLRP----PGTA-LR 306

Query: 164 RGSRGAGRS 172
           + S   GRS
Sbjct: 307 QCSTVVGRS 315


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 49/165 (29%), Positives = 69/165 (41%), Gaps = 29/165 (17%)

Query: 5    GSSPPWPLAPASGPG----------RPPERKDLVAPPDPTA-QSPRVLRGLRLLAHRCPP 53
            GSS P P APA  P           +PPE+    A P+P A + P +LR +     +   
Sbjct: 1688 GSSAPPPKAPAPPPKPETPEKTTSEKPPEQTPETAMPEPPAPEKPSLLRPVEKEKEKEKV 1747

Query: 54   S-GEAKLLARPGTG----RPRRSPRSRSQSVVRV--APPVSPRAPPLPLRPRLELQGCPG 106
            + GE  L     T     RP RS  +   +  R+  A P   +A P P + +  L+   G
Sbjct: 1748 TRGERPLRGERATSGRQTRPERSLATGQPATSRLPKARPTKVKAEPPPKKRKKWLKEAGG 1807

Query: 107  PGDTSGGFPGSRTPRAAERTIGPG-----RRGAPGR--RTGPLRE 144
                 GG PGS    +++    PG      R  PGR  +T  +RE
Sbjct: 1808 NATAGGGPPGS----SSDSESSPGAPSEDERAVPGRLLKTRAMRE 1848



 Score = 38.9 bits (89), Expect = 0.002
 Identities = 33/106 (31%), Positives = 44/106 (41%), Gaps = 12/106 (11%)

Query: 51   CPPSGEAKLLARPGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDT 110
            CPP+        PG   PRR  R R  +  +   P  PR  P  +RP LE+    GP   
Sbjct: 1143 CPPN--------PGPDGPRR--RGRKPTKAKRDGPPRPRGRPR-IRP-LEVPTTAGPASA 1190

Query: 111  SGGFPGSRTPRAAERTIGPGRRGAPGRRTGPLRENSLPVLRPGVGQ 156
            S    G++ PR   R  G     A G R  PL+   + +  P  G+
Sbjct: 1191 STPTDGAKKPRGRGRGRGRKAEEAGGTRLEPLKPLKIKLSVPKAGE 1236



 Score = 34.7 bits (78), Expect = 0.043
 Identities = 51/180 (28%), Positives = 59/180 (32%), Gaps = 54/180 (30%)

Query: 6   SSPPWP---LAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLAR 62
           S+ P P   L  A GP  P     LV PP P    P VL      +H   PS  A  +  
Sbjct: 773 STQPTPHGLLLEAGGPDLP-----LVLPPPPPQLLPSVL------SHAPSPSPSASKV-- 819

Query: 63  PGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLR----------------PRL------- 99
              G     P +R     +  PP  P  PP+PL+                PRL       
Sbjct: 820 ---GVHLLEPATRD-GAPQPPPPPPPPPPPMPLQLEAHLRSHGLEPAAPSPRLRPEESLD 875

Query: 100 ------ELQGC-----PGPGDTSGGFPGSRTPRAAERTIGPGRRGAPGRRTGPLRENSLP 148
                 EL G      P PGDT  G P S     A     P  +G    R  PL     P
Sbjct: 876 PPGAMQELLGALEPLPPAPGDTGVGPPNSEGKDPAGAYRSPSPQGTKAPRFVPLTSICFP 935



 Score = 32.7 bits (73), Expect = 0.16
 Identities = 47/198 (23%), Positives = 64/198 (32%), Gaps = 40/198 (20%)

Query: 12  LAPAS-GPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLL---------A 61
           L PA  GP + P  +    PPDP      +     LLA     +  A+           A
Sbjct: 214 LGPAGLGPAQTPPYRP--GPPDPPPPPRHLPTQFNLLASSSAAAAAAEQSSPQLYNFSGA 271

Query: 62  RPGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLP-----LRPRLELQGC------------ 104
            PG   P R+   +   +     P S + PP P     L+  L   G             
Sbjct: 272 APGPPPPERALPRQDTVIKHYQRPASAQPPPPPPPAHALQHYLSCGGSYPSMGHRANLAC 331

Query: 105 ---------PGPGDTSGGFPGSRTPRAAERTIGPGRRGAPGRRTGPLRENSLPVLRPGVG 155
                    PG G+ S   P   T  A+ R  GP   G  G   G       P+++    
Sbjct: 332 SPLGGGEPSPGAGEPSKAGPSGATAGASGRATGPEAAGGGGAGGG--GGGYRPIIQSPGY 389

Query: 156 QTGTAPLARGSRGAGRSP 173
           +TG       + GA R P
Sbjct: 390 KTGKGGYGAAAGGATRPP 407



 Score = 30.8 bits (68), Expect = 0.62
 Identities = 41/164 (25%), Positives = 57/164 (34%), Gaps = 28/164 (17%)

Query: 15  ASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLARPGTGRPRRSPRS 74
           + GP +PP       PP P         GL       P   + +L    G   P   P +
Sbjct: 476 SGGPPQPPS-----GPPPP---------GLATCQSYSPDQLQGQLYGVQG--EPYPGPAA 519

Query: 75  RSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSGGFPGS--------RTPRAAERT 126
            SQ +   +P +S      P        G  GP    GG   S        ++P A  R 
Sbjct: 520 HSQGLPTASPSLSYSTGHSPALSGHG--GGWGPSSLGGGGEASPSHIIRPLQSPPATGRP 577

Query: 127 IGPGRRGAPGRRTGPLRENSLPVLRPGVGQTGTAPLARGSRGAG 170
            G G  GAPG+    +  ++  +  PG G       A G +G G
Sbjct: 578 PGVGSPGAPGKYLSSVLASAPFLAPPGAGSYAAG--AGGYKGKG 619



 Score = 30.8 bits (68), Expect = 0.62
 Identities = 48/185 (25%), Positives = 67/185 (36%), Gaps = 35/185 (18%)

Query: 3    PVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLR--GLRLLAHRCPPSGEAKLL 60
            P    PP P APAS P     +  L +P   + +  ++L+     LL  R PP    K L
Sbjct: 1040 PPPPPPPPPPAPASEP-----KGGLTSPIFCSTKPKKLLKTSSFHLLRRRDPPFQTPKKL 1094

Query: 61   ARPGTGRPRRSPRSRSQSVVRVAPPVSP------RAPPLPLRPRLELQGCPGPGDTSGGF 114
                        ++   + +R+ P   P      R+ P  L P  ++  CP         
Sbjct: 1095 YAQEYEFEADEDKADVPADIRLNPRRLPDLVSSCRSRPA-LSPLGDIDFCPPN------- 1146

Query: 115  PGSRTPRAAERTIGPGRRGAPGRRTGPLRENSLPVLRPGVGQTGTAPL--------ARGS 166
            PG   PR        GR+    +R GP R    P +RP    T   P         A+  
Sbjct: 1147 PGPDGPRRR------GRKPTKAKRDGPPRPRGRPRIRPLEVPTTAGPASASTPTDGAKKP 1200

Query: 167  RGAGR 171
            RG GR
Sbjct: 1201 RGRGR 1205



 Score = 30.8 bits (68), Expect = 0.62
 Identities = 33/100 (33%), Positives = 41/100 (41%), Gaps = 10/100 (10%)

Query: 11   PLAPASG-PGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLARPGTGRPR 69
            PLAPA+  PG PP      A  + T + P       LL  + PP+       +P    P 
Sbjct: 1423 PLAPAAAVPGPPPLPGLPSANSNGTPEPP-------LLEEKPPPTPPPAPTPQPQPPPPP 1475

Query: 70   RSPRSRSQSVVR-VAP-PVSPRAPPLPLRPRLELQGCPGP 107
              P+    S    VAP P SP  PPLP  P   +   P P
Sbjct: 1476 PPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPP 1515



 Score = 30.0 bits (66), Expect = 1.1
 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)

Query: 8    PPWPLAPASGPGRPPERKDLVAPP-DPTAQSP 38
            PP P  P+  P  PP    L APP +P A SP
Sbjct: 1504 PPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSP 1535



 Score = 28.5 bits (62), Expect = 3.1
 Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 3    PVGSSPPWPLAPASGP-GRPPERKDLVAPPDPTAQSPRVL 41
            P   SPP P  PA+ P   PPE     +P DP     R L
Sbjct: 1507 PAMPSPPPPPPPAAAPLAAPPEEPAAPSPEDPELPDTRPL 1546


>gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo
           sapiens]
          Length = 398

 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 42/138 (30%), Positives = 47/138 (34%), Gaps = 29/138 (21%)

Query: 3   PVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLAR 62
           P    PP P  P   P RPP          P    PR            PP+ E      
Sbjct: 179 PPARLPPAPPGPLLRPARPPR---------PYFPRPRT-----------PPTCEP----- 213

Query: 63  PGTGRPRRSPRSRSQSVVRVAPPVSPR----APPLPLRPRLELQGCPGPGDTSGGFPGSR 118
           P    P   P  RS+ V+   PPV PR     PPL LR  L  +G   P   S    G  
Sbjct: 214 PSRKLPPPLPLCRSRWVLAPPPPVRPRLRVLTPPLALRCALPERGSRTPSTRSAVLSGRV 273

Query: 119 TPRAAERTIGPGRRGAPG 136
                E T+ P  R A G
Sbjct: 274 AGLGTELTLTPSSRRAHG 291


>gi|4507917 WEE1 tyrosine kinase isoform 1 [Homo sapiens]
          Length = 646

 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 41/133 (30%), Positives = 48/133 (36%), Gaps = 13/133 (9%)

Query: 8   PPWPLAPASGPGRP-PERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLARPGTG 66
           P  PL PA  P  P PER+     P P   SP  L    LL   CP + EA        G
Sbjct: 58  PDSPLPPARSPTEPGPERR---RSPGPAPGSPGELEEDLLLPGACPGADEA--------G 106

Query: 67  RPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSGGFPGSRTPRAAERT 126
                     +     +P  SP AP   L        C GPGD S    G+R      R+
Sbjct: 107 GGAEGDSWEEEGFGSSSPVKSPAAPYF-LGSSFSPVRCGGPGDASPRGCGARRAGEGRRS 165

Query: 127 IGPGRRGAPGRRT 139
             P   G P  +T
Sbjct: 166 PRPDHPGTPPHKT 178


>gi|153251245 hypothetical protein LOC55150 [Homo sapiens]
          Length = 129

 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 37/111 (33%), Positives = 49/111 (44%), Gaps = 10/111 (9%)

Query: 5   GSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVL------RGLRLLAHRCPPSGEAK 58
           G S  W  AP S P RPP  ++L A P P   +  V+      R  RL+    PP+    
Sbjct: 23  GVSARWARAPHSAPLRPP--RELHAAPPPATPTQTVVRPAGFPRRTRLMVRSAPPTQRPP 80

Query: 59  LLARPGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGD 109
             +   +G  R+    R Q+++RV   V   AP   LRPRL     P P D
Sbjct: 81  TGSGCVSGLWRKGLGLRPQTLLRVGSVVLSSAP--ALRPRLGPCLRPPPSD 129


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 39/151 (25%), Positives = 53/151 (35%), Gaps = 9/151 (5%)

Query: 11   PLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLARPGTGRPRR 70
            P +P  GP  PP +    AP  P A  P +  GL    H+  P+        P  G P  
Sbjct: 1248 PPSPKGGPATPPPKG---APTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSP-KGGPAT 1303

Query: 71   SPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSGGFPGSRTPRAAERTIGPG 130
            SP   + +     PP SP+  P    P+    G P P   +   P       A      G
Sbjct: 1304 SPPKGAPTPPAATPP-SPKGSPGTPPPK----GAPTPPAVTPPSPKGTPTLPATTPSSKG 1358

Query: 131  RRGAPGRRTGPLRENSLPVLRPGVGQTGTAP 161
                P  + GP    + P  + G   T  +P
Sbjct: 1359 GPTTPSSKEGPTPPAATPSHKGGPAMTPPSP 1389



 Score = 34.3 bits (77), Expect = 0.056
 Identities = 47/187 (25%), Positives = 62/187 (33%), Gaps = 26/187 (13%)

Query: 3    PVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHR--------CPPS 54
            P  ++PP   +P  GP  P  +    AP  P A  P    GL    H+         PPS
Sbjct: 1082 PPAATPP---SPKGGPATPSPKG---APMPPAATPPSPKGGLATPPHKGAPTTPAATPPS 1135

Query: 55   GEAKLLARPGTGRPRR------SPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPG 108
             +  L   P  G P        SP+    +      P +P A P   +  L      G  
Sbjct: 1136 PKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAP 1195

Query: 109  DTSGGFPGSRTPRAAERTIGPGRRGAP--GRRTGPLRENSLPVLRPGVGQTGTAPLARGS 166
             T    P S  P+    T  P  +GAP     T P  +  L    P    T  A      
Sbjct: 1196 TTPAATPPS--PKGGLAT--PSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSP 1251

Query: 167  RGAGRSP 173
            +G   +P
Sbjct: 1252 KGGPATP 1258



 Score = 31.6 bits (70), Expect = 0.36
 Identities = 35/136 (25%), Positives = 45/136 (33%), Gaps = 17/136 (12%)

Query: 3    PVGSSPPWPLAPASGPGRP---PERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKL 59
            P G+  P  + P S  G P   P  K    PP  T  SP+       L    P +  A L
Sbjct: 1005 PKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATL 1064

Query: 60   LARPGTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSGGFPGSRT 119
               P       +P  +       A P SP+  P    P+    G P P       P +  
Sbjct: 1065 ---PSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPK----GAPMP-------PAATP 1110

Query: 120  PRAAERTIGPGRRGAP 135
            P        P  +GAP
Sbjct: 1111 PSPKGGLATPPHKGAP 1126



 Score = 30.4 bits (67), Expect = 0.81
 Identities = 41/175 (23%), Positives = 53/175 (30%), Gaps = 29/175 (16%)

Query: 3    PVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLAR 62
            P G+  P    P S  G P       AP  P A  P    G    + +  P+  A     
Sbjct: 936  PKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPS 995

Query: 63   P----------------------GTGRPRRSPRSRSQSVVRVAPPVSPR----APPLPL- 95
            P                        G P  +P  +  S    A P SP+    A PLP  
Sbjct: 996  PKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKG 1055

Query: 96   RPRLELQGCPGP--GDTSGGFPGSRTPRAAERTIGPGRRGAPGRRTGPLRENSLP 148
             P       P P  G  +    G+ TP AA      G    P  +  P+   + P
Sbjct: 1056 APTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATP 1110



 Score = 29.6 bits (65), Expect = 1.4
 Identities = 37/155 (23%), Positives = 55/155 (35%), Gaps = 14/155 (9%)

Query: 11   PLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLAR-PGTGRPR 69
            P +P   P  P  R+D +A P  T  S +    L       PP+       + P    P+
Sbjct: 1510 PSSPKEVPATPSSRRDPIA-PTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPK 1568

Query: 70   RSPRSRSQSVVRVAPPVSP---RAPPLPLRPRLELQGCPGPGDTSGGFPGSRTPRAAERT 126
             +P + S       P V+P   +  P P +  L       P       P + TP + E+ 
Sbjct: 1569 EAPATPSSKEASSPPAVTPSTYKGAPSP-KELLIPPAVTSPSPKEAPTPPAVTPPSPEK- 1626

Query: 127  IGPGRRGAPGRRTGPLRENSLPVLRPGVGQTGTAP 161
             GP      G  T P      PV    +  + T+P
Sbjct: 1627 -GPATPAPKGTPTSP------PVTPSSLKDSPTSP 1654



 Score = 29.3 bits (64), Expect = 1.8
 Identities = 21/88 (23%), Positives = 28/88 (31%), Gaps = 14/88 (15%)

Query: 11   PLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLARPGTGRPRR 70
            PL+P   P  P  R+    P       P V                  L   P T  P+ 
Sbjct: 1409 PLSPKKAPATPVTREGAATPSKGDLTPPAVT--------------PVSLKKAPATSAPKG 1454

Query: 71   SPRSRSQSVVRVAPPVSPRAPPLPLRPR 98
             P + S       P V+P +P  P  P+
Sbjct: 1455 GPATPSSKGDPTLPAVTPPSPKEPPAPK 1482


>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
           sapiens]
          Length = 1818

 Score = 41.6 bits (96), Expect = 4e-04
 Identities = 49/173 (28%), Positives = 63/173 (36%), Gaps = 26/173 (15%)

Query: 8   PPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLL----ARP 63
           PP P  PA   G P  +     P DP  + P    GL        P G   +L       
Sbjct: 455 PPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGD 514

Query: 64  GTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSG--------GFP 115
           G+  P  S +      +     ++ R PP P    + L G PGP    G        G P
Sbjct: 515 GSKGPTISAQEAQAQAILQQARIALRGPPGP----MGLTGRPGPVGGPGSSGAKGESGDP 570

Query: 116 GSRTPRAAERTIGPGRRGAPGRRTGPLRENSLPVLRPGVGQTGTAPLARGSRG 168
           G + PR  +    PG  G PG+R  P  +        G G  G  P A+G RG
Sbjct: 571 GPQGPRGVQGP--PGPTGKPGKRGRPGADG-------GRGMPG-EPGAKGDRG 613



 Score = 30.8 bits (68), Expect = 0.62
 Identities = 40/138 (28%), Positives = 49/138 (35%), Gaps = 14/138 (10%)

Query: 8   PPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLARPGTGR 67
           PP P       GRP        P +P A+  R   GL  L       GE      PG   
Sbjct: 581 PPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPG--- 637

Query: 68  PRRSPRSRSQSVVRVAPPVSPRAPPLPLRPR--LELQGCPG-PGDTSGGFPGSRTPRAAE 124
           P      R +        + PR  P    PR  L  +G PG PG    G  G   P   +
Sbjct: 638 PPGDDGMRGED-----GEIGPRGLPGEAGPRGLLGPRGTPGAPGQP--GMAGVDGPPGPK 690

Query: 125 RTIGP-GRRGAPGRRTGP 141
             +GP G  G PG++  P
Sbjct: 691 GNMGPQGEPGPPGQQGNP 708



 Score = 26.9 bits (58), Expect = 8.9
 Identities = 44/174 (25%), Positives = 56/174 (32%), Gaps = 19/174 (10%)

Query: 3    PVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLAR 62
            P    PP P      PG P +R +           P  + G +       P GE      
Sbjct: 942  PGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGP 1001

Query: 63   PGTGRPRRSPRSRSQSVVRVAPP---VSPRAPPLPLRPRLELQGCPG----PGDTSG--- 112
            PG    +  P +  +   +  P    +S +  P  LR     +G PG    PG   G   
Sbjct: 1002 PGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGP 1061

Query: 113  -------GFPGSRTPRAAERTIG-PGRRGAPGRRTGPLRENSLPVLRPGVGQTG 158
                   G PG R        IG PGR G  G   GP  E   P  +   G  G
Sbjct: 1062 QGPPGPVGSPGERGSAGTAGPIGLPGRPGPQG-PPGPAGEKGAPGEKGPQGPAG 1114


>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
           sapiens]
          Length = 1767

 Score = 41.6 bits (96), Expect = 4e-04
 Identities = 49/173 (28%), Positives = 63/173 (36%), Gaps = 26/173 (15%)

Query: 8   PPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLL----ARP 63
           PP P  PA   G P  +     P DP  + P    GL        P G   +L       
Sbjct: 404 PPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGD 463

Query: 64  GTGRPRRSPRSRSQSVVRVAPPVSPRAPPLPLRPRLELQGCPGPGDTSG--------GFP 115
           G+  P  S +      +     ++ R PP P    + L G PGP    G        G P
Sbjct: 464 GSKGPTISAQEAQAQAILQQARIALRGPPGP----MGLTGRPGPVGGPGSSGAKGESGDP 519

Query: 116 GSRTPRAAERTIGPGRRGAPGRRTGPLRENSLPVLRPGVGQTGTAPLARGSRG 168
           G + PR  +    PG  G PG+R  P  +        G G  G  P A+G RG
Sbjct: 520 GPQGPRGVQGP--PGPTGKPGKRGRPGADG-------GRGMPG-EPGAKGDRG 562



 Score = 30.8 bits (68), Expect = 0.62
 Identities = 40/138 (28%), Positives = 49/138 (35%), Gaps = 14/138 (10%)

Query: 8   PPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLARPGTGR 67
           PP P       GRP        P +P A+  R   GL  L       GE      PG   
Sbjct: 530 PPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPG--- 586

Query: 68  PRRSPRSRSQSVVRVAPPVSPRAPPLPLRPR--LELQGCPG-PGDTSGGFPGSRTPRAAE 124
           P      R +        + PR  P    PR  L  +G PG PG    G  G   P   +
Sbjct: 587 PPGDDGMRGED-----GEIGPRGLPGEAGPRGLLGPRGTPGAPGQP--GMAGVDGPPGPK 639

Query: 125 RTIGP-GRRGAPGRRTGP 141
             +GP G  G PG++  P
Sbjct: 640 GNMGPQGEPGPPGQQGNP 657



 Score = 26.9 bits (58), Expect = 8.9
 Identities = 44/174 (25%), Positives = 56/174 (32%), Gaps = 19/174 (10%)

Query: 3    PVGSSPPWPLAPASGPGRPPERKDLVAPPDPTAQSPRVLRGLRLLAHRCPPSGEAKLLAR 62
            P    PP P      PG P +R +           P  + G +       P GE      
Sbjct: 891  PGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGP 950

Query: 63   PGTGRPRRSPRSRSQSVVRVAPP---VSPRAPPLPLRPRLELQGCPG----PGDTSG--- 112
            PG    +  P +  +   +  P    +S +  P  LR     +G PG    PG   G   
Sbjct: 951  PGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGP 1010

Query: 113  -------GFPGSRTPRAAERTIG-PGRRGAPGRRTGPLRENSLPVLRPGVGQTG 158
                   G PG R        IG PGR G  G   GP  E   P  +   G  G
Sbjct: 1011 QGPPGPVGSPGERGSAGTAGPIGLPGRPGPQG-PPGPAGEKGAPGEKGPQGPAG 1063


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.139    0.444 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,007,032
Number of Sequences: 37866
Number of extensions: 790564
Number of successful extensions: 6317
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 1049
Number of HSP's that attempted gapping in prelim test: 4482
Number of HSP's gapped (non-prelim): 2525
length of query: 174
length of database: 18,247,518
effective HSP length: 95
effective length of query: 79
effective length of database: 14,650,248
effective search space: 1157369592
effective search space used: 1157369592
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press