LOC100127891 16408

Name: LOC100127891	Sequence: fasta or formatted (460aa)		NCBI GI: 239509031
Description: PREDICTED: similar to hCG2042508		Not currently referenced in the text
Other entries for this name: alt mRNA {460aa} PREDICTED: similar to hCG2042508 alt mRNA {460aa} PREDICTED: similar to hCG2042508 alt prot {480aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.6 44 2 C cysteine 1.7 8 1 D aspartate 2.0 9 1 E glutamate 4.8 22 2 F phenylalanine 2.0 9 2 G glycine 13.0 60 4 H histidine 3.0 14 2 I isoleucine 2.0 9 2 K lysine 3.0 14 2 L leucine 7.6 35 3 M methionine 1.1 5 1 N asparagine 1.5 7 1 P proline 13.7 63 3 Q glutamine 5.2 24 2 R arginine 12.0 55 6 S serine 7.2 33 2 T threonine 5.9 27 2 V valine 3.3 15 2 W tryptophan 0.7 3 1 Y tyrosine 0.9 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG2042508 LOC100127891 1.000 PREDICTED: similar to hCG2042508 LOC100127891 1.000 PREDICTED: similar to hCG2042508 LOC100127891 0.855 PREDICTED: hypothetical protein SRRM2 0.042 splicing coactivator subunit SRm300 WAS 0.040 Wiskott-Aldrich syndrome protein COL1A1 0.038 alpha 1 type I collagen preproprotein CPSF6 0.038 cleavage and polyadenylation specific factor 6, 68 ... SCAF1 0.038 SR-related CTD-associated factor 1 COL11A1 0.036 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.036 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.036 alpha 1 type XI collagen isoform A preproprotein [Ho... PRB1 0.036 proline-rich protein BstNI subfamily 1 isoform 1 pre... PRB4 0.035 proline-rich protein BstNI subfamily 4 precursor [Ho... COL5A1 0.035 alpha 1 type V collagen preproprotein COL7A1 0.035 alpha 1 type VII collagen precursor PRB2 0.035 proline-rich protein BstNI subfamily 2 SRRM1 0.035 serine/arginine repetitive matrix 1 PDCD7 0.034 programmed cell death 7 SHANK1 0.034 SH3 and multiple ankyrin repeat domains 1 NACA 0.034 nascent polypeptide-associated complex alpha subuni... LOC100293055 0.032 PREDICTED: similar to COL22A1 protein DIAPH1 0.032 diaphanous 1 isoform 2 DIAPH1 0.032 diaphanous 1 isoform 1 WIPF1 0.032 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.032 WAS/WASL interacting protein family, member 1 SYN1 0.032 synapsin I isoform Ia SYN1 0.032 synapsin I isoform Ib PTPN23 0.032 protein tyrosine phosphatase, non-receptor type 23 [... COL22A1 0.032 collagen, type XXII, alpha 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.