Guide to the Human Genome
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Name: C19orf73 Sequence: fasta or formatted (129aa) NCBI GI: 153251245
Description:

hypothetical protein LOC55150

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         12           2
 C cysteine            3.1          4           1
 D aspartate           1.6          2           1
 E glutamate           1.6          2           1
 F phenylalanine       2.3          3           1
 G glycine            10.9         14           3
 H histidine           1.6          2           1
 I isoleucine          0.0          0           0
 K lysine              2.3          3           1
 L leucine            11.6         15           2
 M methionine          1.6          2           1
 N asparagine          0.0          0           0
 P proline            16.3         21           3
 Q glutamine           3.1          4           1
 R arginine           14.0         18           2
 S serine              7.0          9           2
 T threonine           5.4          7           1
 V valine              7.0          9           2
 W tryptophan          1.6          2           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC55150 
LOC100293112          0.069   PREDICTED: hypothetical protein 
LOC100288817          0.069   PREDICTED: hypothetical protein 
LOC100288817          0.069   PREDICTED: hypothetical protein XP_002343307 
WASL                  0.049   Wiskott-Aldrich syndrome gene-like protein 
ARTN                  0.049   neurotrophic factor artemin isoform 2 
ARTN                  0.049   neurotrophic factor artemin isoform 1 precursor [Ho...
ARTN                  0.049   neurotrophic factor artemin isoform 3 precursor [Ho...
ARTN                  0.049   neurotrophic factor artemin isoform 1 precursor [Ho...
ARTN                  0.049   neurotrophic factor artemin isoform 3 precursor [Ho...
LOC100292723          0.049   PREDICTED: hypothetical protein 
GGN                   0.049   gametogenetin 
LOC100292934          0.040   PREDICTED: hypothetical protein 
PRR21                 0.040   proline rich 21 
LOC100290755          0.040   PREDICTED: hypothetical protein XP_002346496 
LOC100291632          0.040   PREDICTED: hypothetical protein XP_002344527 
LOC100288471          0.040   PREDICTED: hypothetical protein 
LOC100288471          0.040   PREDICTED: hypothetical protein XP_002343034 
KLF2                  0.036   Kruppel-like factor 
GLTSCR1               0.036   glioma tumor suppressor candidate region gene 1 [Ho...
PRB2                  0.036   proline-rich protein BstNI subfamily 2 
HIVEP3                0.036   human immunodeficiency virus type I enhancer bindin...
HIVEP3                0.036   human immunodeficiency virus type I enhancer bindin...
ATF7                  0.032   activating transcription factor 7 isoform 2 
ATF7                  0.032   activating transcription factor 7 isoform 1 
ARHGEF5               0.032   rho guanine nucleotide exchange factor 5 
AGAP2                 0.028   centaurin, gamma 1 isoform PIKE-L 
FLJ22184              0.028   PREDICTED: hypothetical protein FLJ22184 
NHS                   0.028   Nance-Horan syndrome protein isoform 1 
PRB1                  0.028   proline-rich protein BstNI subfamily 1 isoform 1 pre...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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