BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] (480 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 996 0.0 gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 822 0.0 gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] 822 0.0 gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens] 822 0.0 gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 67 4e-11 gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 67 5e-11 gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 67 5e-11 gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 67 5e-11 gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 63 7e-10 gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ... 63 7e-10 gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ... 63 7e-10 gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 61 2e-09 gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 61 3e-09 gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 60 3e-09 gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 60 4e-09 gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens] 59 7e-09 gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 59 1e-08 gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 58 2e-08 gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 57 3e-08 gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 57 3e-08 gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 57 3e-08 gi|19924099 synapsin I isoform Ia [Homo sapiens] 57 4e-08 gi|19924097 synapsin I isoform Ib [Homo sapiens] 57 4e-08 gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 57 5e-08 gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 57 5e-08 gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 56 6e-08 gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 56 6e-08 gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 56 8e-08 gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 55 2e-07 gi|110735435 collagen, type V, alpha 3 preproprotein [Homo sapiens] 55 2e-07 >gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] Length = 480 Score = 996 bits (2574), Expect = 0.0 Identities = 480/480 (100%), Positives = 480/480 (100%) Query: 1 MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR 60 MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR Sbjct: 1 MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR 60 Query: 61 WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN 120 WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN Sbjct: 61 WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN 120 Query: 121 RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK 180 RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK Sbjct: 121 RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK 180 Query: 181 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAA 240 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAA Sbjct: 181 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAA 240 Query: 241 RPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRAR 300 RPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRAR Sbjct: 241 RPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRAR 300 Query: 301 QDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHG 360 QDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHG Sbjct: 301 QDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHG 360 Query: 361 PASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTT 420 PASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTT Sbjct: 361 PASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTT 420 Query: 421 RTPRRSGASGPKMVADQTSGISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL 480 RTPRRSGASGPKMVADQTSGISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL Sbjct: 421 RTPRRSGASGPKMVADQTSGISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL 480 >gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] Length = 460 Score = 822 bits (2124), Expect = 0.0 Identities = 415/480 (86%), Positives = 420/480 (87%), Gaps = 20/480 (4%) Query: 1 MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR 60 MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR Sbjct: 1 MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR 60 Query: 61 WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN 120 WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN Sbjct: 61 WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN 120 Query: 121 RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK 180 RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK Sbjct: 121 RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK 180 Query: 181 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAA 240 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPAR EG PR R+ + Sbjct: 181 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREG----PRGRAESR 236 Query: 241 RPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRAR 300 PA P L + + P P G RAPG GR P R P A Sbjct: 237 GSGPAQ-PAHLPLPGPAHSPAPPAPELREG------RAPGSTAGRRP----RPREPQAAE 285 Query: 301 QDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHG 360 + SGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHG Sbjct: 286 E-----SGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHG 340 Query: 361 PASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTT 420 PASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTT Sbjct: 341 PASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTT 400 Query: 421 RTPRRSGASGPKMVADQTSGISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL 480 RTPRRSGASGPKMVADQTSGISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL Sbjct: 401 RTPRRSGASGPKMVADQTSGISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL 460 >gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] Length = 460 Score = 822 bits (2124), Expect = 0.0 Identities = 415/480 (86%), Positives = 420/480 (87%), Gaps = 20/480 (4%) Query: 1 MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR 60 MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR Sbjct: 1 MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR 60 Query: 61 WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN 120 WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN Sbjct: 61 WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN 120 Query: 121 RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK 180 RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK Sbjct: 121 RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK 180 Query: 181 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAA 240 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPAR EG PR R+ + Sbjct: 181 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREG----PRGRAESR 236 Query: 241 RPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRAR 300 PA P L + + P P G RAPG GR P R P A Sbjct: 237 GSGPAQ-PAHLPLPGPAHSPAPPAPELREG------RAPGSTAGRRP----RPREPQAAE 285 Query: 301 QDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHG 360 + SGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHG Sbjct: 286 E-----SGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHG 340 Query: 361 PASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTT 420 PASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTT Sbjct: 341 PASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTT 400 Query: 421 RTPRRSGASGPKMVADQTSGISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL 480 RTPRRSGASGPKMVADQTSGISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL Sbjct: 401 RTPRRSGASGPKMVADQTSGISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL 460 >gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens] Length = 460 Score = 822 bits (2124), Expect = 0.0 Identities = 415/480 (86%), Positives = 420/480 (87%), Gaps = 20/480 (4%) Query: 1 MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR 60 MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR Sbjct: 1 MESRQQLLQLVGADITGSPPSIKIFKQLQVLVGTAKYTAETLGPAATTQQVREAADIIAR 60 Query: 61 WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN 120 WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN Sbjct: 61 WSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKN 120 Query: 121 RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK 180 RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK Sbjct: 121 RGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNK 180 Query: 181 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAA 240 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPAR EG PR R+ + Sbjct: 181 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREG----PRGRAESR 236 Query: 241 RPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRAR 300 PA P L + + P P G RAPG GR P R P A Sbjct: 237 GSGPAQ-PAHLPLPGPAHSPAPPAPELREG------RAPGSTAGRRP----RPREPQAAE 285 Query: 301 QDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHG 360 + SGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHG Sbjct: 286 E-----SGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHG 340 Query: 361 PASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTT 420 PASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTT Sbjct: 341 PASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTT 400 Query: 421 RTPRRSGASGPKMVADQTSGISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL 480 RTPRRSGASGPKMVADQTSGISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL Sbjct: 401 RTPRRSGASGPKMVADQTSGISRPPTAGIGTSRLCLGDRQVVPLWFFRRCLPGGILTLSL 460 >gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] Length = 1838 Score = 67.0 bits (162), Expect = 4e-11 Identities = 98/359 (27%), Positives = 119/359 (33%), Gaps = 60/359 (16%) Query: 91 PVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALL 150 P KGS +G PP P G P + GPS + G + Q +GL Sbjct: 1164 PGQKGSKGDKGEQGPPGP-TGPQGPIGQP--GPSGADGEPGPRGQ--------QGLFGQK 1212 Query: 151 LELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQ 210 + PR P PV L P PP ++G G + PP P P+ Sbjct: 1213 GDEGPRGFPG----------PPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGA 1262 Query: 211 P---GPTAPPARVREPGRA-----EGASREPRLRSRAARPPPAPGPGALSRASRSRAAGR 262 P GP PP + PG G + EP L P P G + S AAG Sbjct: 1263 PGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGP 1322 Query: 263 PGP-GFHGGEKAAAPRAPGG-----GGGRNPGALGRAAPPSRARQDAW-GLSGCATVGLR 315 PGP G G + P G G PG G+ PP D G +G Sbjct: 1323 PGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSP----- 1377 Query: 316 RGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEG--EGTHATHGPASPPGRRHDEEV 373 G G S PP G R+ +G GE EG GP P G + Sbjct: 1378 -GPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGA--PGKP 1434 Query: 374 GAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGPK 432 G LR G +GL +P P G M P G SGPK Sbjct: 1435 GPDGLRGIPGPVGEQGLPGSPGPDGPPGP--------------MGPPGLPGLKGDSGPK 1479 Score = 61.6 bits (148), Expect = 2e-09 Identities = 97/349 (27%), Positives = 115/349 (32%), Gaps = 79/349 (22%) Query: 70 PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHP-GDHHPRH-RKNRGPSAGT 127 P G G+ G + P FP A G GR TP P P G P R RGP T Sbjct: 870 PGLPGYPGRQGPKGSIGFPGFPGANGE--KGGRGTPGKPGPRGQRGPTGPRGERGPRGIT 927 Query: 128 SQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTP---- 183 + G K + P PP G Q P + G K P Sbjct: 928 GKPGPKGNSGG-------------DGPAGPPGERGPNGP----QGPTGFPGPKGPPGPPG 970 Query: 184 -------PRQEGSFGGRPKSQPPLPQETAAP------------APQPGPTAPPARVREPG 224 P Q G G + K+ PP P P PGP PP PG Sbjct: 971 KDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPG 1030 Query: 225 RA--EGASREPRLRSRAARPPP-----------APGP-GALSRASRSRAAGRPGPGFHGG 270 A EG +P + P PGP GAL G PGP G Sbjct: 1031 LAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPG 1090 Query: 271 EKAAAPRA-----PGGGGGRNP-------GALGRAAPPSRARQDAWGLSGCATVGLRRGD 318 E+ A A PG G + P GA G P A +D GL G VGL Sbjct: 1091 ERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRD--GLQG--PVGLP--- 1143 Query: 319 CDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGR 367 AG PP G+ ++ +G GE +G GP P G+ Sbjct: 1144 -GPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGE-QGPPGPTGPQGPIGQ 1190 Score = 55.8 bits (133), Expect = 8e-08 Identities = 63/207 (30%), Positives = 78/207 (37%), Gaps = 29/207 (14%) Query: 174 PVYLGNKPTPPRQEGSFG--GRP--KSQPPLPQETAAPAP--QPGPTAPPARVREPGRA- 226 PV P PP + G G G P K P +T +P P +PGP+ PP + PG A Sbjct: 1340 PVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAG 1399 Query: 227 -EGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGP-GFHG-----GEKAAAPRAP 279 EG E + A P PG A G+PGP G G GE+ P +P Sbjct: 1400 PEGRQGEKGAKGEAGLEGP---PGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQ-GLPGSP 1455 Query: 280 GGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRF 339 G G PG +G P GL G + +G G PP G Sbjct: 1456 GPDG--PPGPMGPPGLP--------GLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGL 1505 Query: 340 CRRRRRRGGGGEGEGTHATHGPASPPG 366 + G GE +G GP PPG Sbjct: 1506 PGPQGSSGPKGE-QGITGPSGPIGPPG 1531 Score = 47.0 bits (110), Expect = 4e-05 Identities = 88/331 (26%), Positives = 110/331 (33%), Gaps = 74/331 (22%) Query: 91 PVAKGSVPSEGRATPPLPHPGDHHPRHRKNR-GPSAGTSQLGKKTQCRSLFLRTKGLCAL 149 P KG G + PP P PGD R GP + G + L KG Sbjct: 639 PGEKGHRGDPGPSGPPGP-PGDDGERGDDGEVGPRGLPGEPGPRG-----LLGPKGPPG- 691 Query: 150 LLELPPRPPPNLQEGGQRAIFQRPPVYLG--NKPTPPRQEGSFGGRPKSQPPLPQETAAP 207 PP PP GQ P +G +P PP Q+G+ G + P PQ P Sbjct: 692 ----PPGPPGVTGMDGQPG----PKGNVGPQGEPGPPGQQGNPGAQGL---PGPQGAIGP 740 Query: 208 APQPGPTAPPARVREPGRAEGASREPRLRS----RAARPPPAP-------GPGALSRASR 256 + GP P PG A+G P + + PP P GP + A Sbjct: 741 PGEKGPLGKPGLPGMPG-ADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADG 799 Query: 257 SRAA-------GRPG-PGFHG-----GEKAA----------APRAPGGGGGRN--PGALG 291 R G G PGF G G++ P P G GG N PG LG Sbjct: 800 IRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLG 859 Query: 292 RAAPPSRARQDAWGLSG----------CATVGLRRGDCDRAGSSQPPATSGNGERCRFCR 341 P + + GL G G + ++ G P G+R Sbjct: 860 --PPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGP 917 Query: 342 RRRRRGGGGEGE----GTHATHGPASPPGRR 368 R R G G+ G GPA PPG R Sbjct: 918 RGERGPRGITGKPGPKGNSGGDGPAGPPGER 948 Score = 45.4 bits (106), Expect = 1e-04 Identities = 70/267 (26%), Positives = 89/267 (33%), Gaps = 27/267 (10%) Query: 157 PPPNLQEGGQRAIFQRP---------PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAP 207 P + QE +AI Q+ P+ L +P P GS G + + PQ Sbjct: 537 PMVSAQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGV 596 Query: 208 APQPGPTAPPARVREPGR--AEGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGP 265 PGP P R G A G + + A PG +G PGP Sbjct: 597 QGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGP 656 Query: 266 ----GFHGGEKAAAPRA-PGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCD 320 G G + PR PG G R G LG PP G++G +G+ Sbjct: 657 PGDDGERGDDGEVGPRGLPGEPGPR--GLLGPKGPPGPPGPP--GVTGMDGQPGPKGNVG 712 Query: 321 RAGSSQPPATSGNGERCRFCRRRRRRGGGGE-----GEGTHATHGPASPPGRRHDEEVGA 375 G PP GN + G GE G G PPG H + G Sbjct: 713 PQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPG--HPGKEGP 770 Query: 376 AVLRAGSGEGSRRGLQLTPPPRRVHGA 402 + G G +G P PR V GA Sbjct: 771 PGEKGGQGPPGPQGPIGYPGPRGVKGA 797 Score = 41.6 bits (96), Expect = 0.002 Identities = 65/231 (28%), Positives = 78/231 (33%), Gaps = 42/231 (18%) Query: 198 PPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAPGPGAL----SR 253 PP P+ A PG P +V +PG G P L P P PG + R Sbjct: 470 PPGPEGPAGLPGPPGTMGPTGQVGDPGE-RGPPGRPGLPGADGLPGP---PGTMLMLPFR 525 Query: 254 ASRSRAAGRPGPGFHGGEKAA------------APRAPGGGGGRNPGALG-------RAA 294 AG GP E A P P G GR PG +G + Sbjct: 526 FGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGLTGR-PGPVGPPGSGGLKGE 584 Query: 295 PPSRARQDAWGLSGCATVGLRRGDCDRAGS----SQPPATSGNGERCRFCRRRRRRGGGG 350 P Q G+ G + G RAGS P T G+R G G Sbjct: 585 PGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDR----GFDGLAGLPG 640 Query: 351 EGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHG 401 E +G GP+ PPG D+ R GE RGL P PR + G Sbjct: 641 E-KGHRGDPGPSGPPGPPGDDGE-----RGDDGEVGPRGLPGEPGPRGLLG 685 Score = 37.4 bits (85), Expect = 0.030 Identities = 32/119 (26%), Positives = 42/119 (35%), Gaps = 37/119 (31%) Query: 183 PPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAARP 242 PP ++G G R P PQ ++ P + G T P + PG P Sbjct: 1493 PPGEQGEKGDRGL---PGPQGSSGPKGEQGITGPSGPIGPPG-----------------P 1532 Query: 243 PPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQ 301 P PGP PG G + ++ P P G G +PG G PP Q Sbjct: 1533 PGLPGP----------------PGPKGAKGSSGPTGPKGEAG-HPGPPGPPGPPGEVIQ 1574 Score = 29.3 bits (64), Expect = 8.3 Identities = 16/50 (32%), Positives = 20/50 (40%) Query: 174 PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREP 223 P+ P P G G + S P P+ A PGP PP V +P Sbjct: 1526 PIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEVIQP 1575 >gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo sapiens] Length = 1818 Score = 66.6 bits (161), Expect = 5e-11 Identities = 94/359 (26%), Positives = 117/359 (32%), Gaps = 59/359 (16%) Query: 70 PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQ 129 P G G+ G P FP A G + G A P P R +RG T + Sbjct: 852 PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGK 911 Query: 130 LGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRP-------PVYLGNKPT 182 G K + PP PP G + P P P Sbjct: 912 PGPKGTSGG-------------DGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPG 958 Query: 183 PPRQEGSFGGRPKSQPPLPQETAAP------------APQPGPTAPPARVREPGRA--EG 228 P Q G G + K+ PP P P PGP PP PG A EG Sbjct: 959 HPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEG 1018 Query: 229 ASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRN-- 286 A +P + + + PA G A G PG GGE P P G G Sbjct: 1019 AKGDPGPQGISGKDGPAGLRGFPGERGLPGAQG--APGLKGGEGPQGPPGPVGSPGERGS 1076 Query: 287 ---------PGALGRAAPPSRA-RQDAWGLSGCATVGLRRGDCDRAGSSQPPATSG---- 332 PG G PP A + A G G R G G P +G Sbjct: 1077 AGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGE 1136 Query: 333 NGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQ 391 +G++ ++ G +GE +GP PPG + VGA + G GE RG Q Sbjct: 1137 DGDKGEIGEPGQKGSKGDKGE-----NGPPGPPGLQ--GPVGAPGIAGGDGEPGPRGQQ 1188 Score = 56.2 bits (134), Expect = 6e-08 Identities = 76/280 (27%), Positives = 96/280 (34%), Gaps = 31/280 (11%) Query: 157 PPPNLQEGGQRAIFQRP---------PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAP 207 P + QE +AI Q+ P+ L +P P GS G + +S P PQ Sbjct: 519 PTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGV 578 Query: 208 APQPGPTAPPARVREPGR--AEGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGP 265 PGPT P + PG G EP + PG G PGP Sbjct: 579 QGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGP 638 Query: 266 ----GFHGGEKAAAPRA-PGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCD 320 G G + PR PG G R G LG P Q G++G +G+ Sbjct: 639 PGDDGMRGEDGEIGPRGLPGEAGPR--GLLGPRGTPGAPGQP--GMAGVDGPPGPKGNMG 694 Query: 321 RAGSSQPPATSGNGERCRFCRRRRRRGGGGE-----GEGTHATHGPASPPGRRHDEEVGA 375 G PP GN + G GE G G PPG H + G Sbjct: 695 PQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPG--HPGKEGQ 752 Query: 376 AVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSN 415 + + G +G P PR V GA G R LK + Sbjct: 753 SGEKGALGPPGPQGPIGYPGPRGVKGA----DGVRGLKGS 788 Score = 52.8 bits (125), Expect = 7e-07 Identities = 65/234 (27%), Positives = 82/234 (35%), Gaps = 25/234 (10%) Query: 174 PVYLGNKPTPPRQEGSFG-----GRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEG 228 P+ L P PP ++G G G P PP P+ P GP PP V G G Sbjct: 1208 PIGLQGLPGPPGEKGENGDVGPMGPP--GPPGPRGPQGPNGADGPQGPPGSVGSVG-GVG 1264 Query: 229 ASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGR-NP 287 EP P A G AG PG G K PG G + NP Sbjct: 1265 EKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKG----PPGDDGPKGNP 1320 Query: 288 GALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGN-GERCRFCRRRRRR 346 G +G P + G +G VG +G+ G PP SG G +R Sbjct: 1321 GPVGFPGDPGPPGEP--GPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPG 1378 Query: 347 GGGGEG----EGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPP 396 G EG +G G PPG+ G + +G+ GL+ P P Sbjct: 1379 AAGAEGRQGEKGAKGEAGAEGPPGK-----TGPVGPQGPAGKPGPEGLRGIPGP 1427 Score = 52.8 bits (125), Expect = 7e-07 Identities = 59/204 (28%), Positives = 71/204 (34%), Gaps = 23/204 (11%) Query: 174 PVYLGNKPTPPRQEGSFG----GRPKSQPPLPQETAAPAP--QPGPTAPPARVREPGR-- 225 PV P PP + G G G K + P + P P + GP PP + PG Sbjct: 1322 PVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAG 1381 Query: 226 AEGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGP-GFHGGEKAAAPRAPGGGGG 284 AEG E + A P PG AG+PGP G G PG G Sbjct: 1382 AEGRQGEKGAKGEAGAEGP---PGKTGPVGPQGPAGKPGPEGLRG--------IPGPVGE 1430 Query: 285 RN-PGALGRAAPPSRARQDAW-GLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRR 342 + PGA G+ PP GL G +G G PP G Sbjct: 1431 QGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGT 1490 Query: 343 RRRRGGGGEGEGTHATHGPASPPG 366 + G G+G G GP PPG Sbjct: 1491 QGSPGAKGDG-GIPGPAGPLGPPG 1513 Score = 48.1 bits (113), Expect = 2e-05 Identities = 77/281 (27%), Positives = 96/281 (34%), Gaps = 68/281 (24%) Query: 188 GSFGGRPKSQPPLPQETAAPAPQPGPTAP---------PARVREPGRA-----------E 227 G G R + P P+ A P PGP+ P PGR Sbjct: 814 GQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFP 873 Query: 228 GASREPRLRSRAARPPPAPGPGAL----SRASRSRAAGRPGP-GFHGGEKAAAPRAPGGG 282 GA+ E R A +P P G SR +R G+PGP G GG+ P PG Sbjct: 874 GANGEKGARGVAGKPGPRGQRGPTGPRGSRGARG-PTGKPGPKGTSGGD--GPPGPPGER 930 Query: 283 GGRNP----GALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSG------ 332 G + P G G PP +D GL G +RG+ G + PP G Sbjct: 931 GPQGPQGPVGFPGPKGPPGPPGKD--GLPGHPG---QRGETGFQGKTGPPGPGGVVGPQG 985 Query: 333 -NGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQ 391 GE G GE H GP PPG + GAA G+ +G+ Sbjct: 986 PTGET------------GPIGERGHP--GPPGPPGEQ--GLPGAAGKEGAKGDPGPQGIS 1029 Query: 392 LTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGPK 432 P + G F G R L P G GP+ Sbjct: 1030 GKDGPAGLRG----FPGERGLP----GAQGAPGLKGGEGPQ 1062 Score = 43.1 bits (100), Expect = 6e-04 Identities = 67/249 (26%), Positives = 83/249 (33%), Gaps = 61/249 (24%) Query: 153 LPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFG--GRPKSQPPLPQE-TAAPAP 209 LP RP P Q PP G K P ++G G GR Q P+ A PA Sbjct: 1085 LPGRPGP-----------QGPPGPAGEKGAPG-EKGPQGPAGRDGVQGPVGLPGPAGPAG 1132 Query: 210 QPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHG 269 PG + EPG+ S+ + + PP GP PG G Sbjct: 1133 SPGEDGDKGEIGEPGQK--GSKGDKGENGPPGPPGLQGPVG-------------APGIAG 1177 Query: 270 GEKAAAPRAPGGGGGR--NPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQP 327 G+ PR G G+ + GA G PP GL G +G+ G P Sbjct: 1178 GDGEPGPRGQQGMFGQKGDEGARGFPGPPGPI-----GLQGLPGPPGEKGENGDVGPMGP 1232 Query: 328 PATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSR 387 P G RG +G + GP PPG VG+ G GE Sbjct: 1233 PGPPG------------PRG----PQGPNGADGPQGPPG-----SVGSV---GGVGEKGE 1268 Query: 388 RGLQLTPPP 396 G P P Sbjct: 1269 PGEAGNPGP 1277 Score = 42.0 bits (97), Expect = 0.001 Identities = 104/437 (23%), Positives = 132/437 (30%), Gaps = 116/437 (26%) Query: 74 GDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNR-GPSAGTSQLGK 132 G+ G G P P KG G PP P PGD R GP + G Sbjct: 604 GEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGP-PGDDGMRGEDGEIGPRGLPGEAGP 662 Query: 133 KTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGN-----KPTPPRQE 187 + GL L PR P A PP GN +P PP Q+ Sbjct: 663 R-----------GL------LGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQ 705 Query: 188 GSFG--GRPKSQPPL-------PQETAAPAPQPGPTAPPARVREPGRA--EGASREPRLR 236 G+ G G P Q P+ PQ A PG PP + G++ +GA P + Sbjct: 706 GNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQ 765 Query: 237 SRAARPPPA-----------------------PG----------------------PGAL 251 P P PG G Sbjct: 766 GPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPE 825 Query: 252 SRASRSRAAGRPGPGFHGGEKA--AAPRAPGGGGGRNP-GALGRAAPPSRARQDAWGLSG 308 R+ G PGP GEK P PG G + P G+ G P A G G Sbjct: 826 GPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPG-----ANGEKG 880 Query: 309 CATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRR 368 V + G + G + P R R R G +GT GP PPG R Sbjct: 881 ARGVAGKPGPRGQRGPTGP----------RGSRGARGPTGKPGPKGTSGGDGPPGPPGER 930 Query: 369 HDE----EVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPR 424 + VG + G + GL P G+ ++ + T P Sbjct: 931 GPQGPQGPVGFPGPKGPPGPPGKDGLPGHP--------------GQRGETGFQGKTGPPG 976 Query: 425 RSGASGPKMVADQTSGI 441 G GP+ +T I Sbjct: 977 PGGVVGPQGPTGETGPI 993 Score = 41.2 bits (95), Expect = 0.002 Identities = 67/258 (25%), Positives = 83/258 (32%), Gaps = 65/258 (25%) Query: 165 GQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPG 224 G+ A+ + P + + P P G G PP Q P PG PP R PG Sbjct: 441 GEPAVVE-PGMLVEGPPGPAGPAGIMG------PPGLQGPTGPPGDPGDRGPPGRPGLPG 493 Query: 225 RAEGASREP--------RLRSRAARPPPAPGPGALSRASRSRA-------------AGRP 263 A+G P R ++ P A ++A +A GRP Sbjct: 494 -ADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRP 552 Query: 264 GP-------GFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRR 316 GP G G P+ P G G PG G+ P R R A G G + Sbjct: 553 GPVGGPGSSGAKGESGDPGPQGPRGVQG-PPGPTGK--PGKRGRPGADGGRGMPGEPGAK 609 Query: 317 GDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPG----RRHDEE 372 GD G P G+ G GP PPG R D E Sbjct: 610 GDRGFDGLPGLPGDKGH-------------------RGERGPQGPPGPPGDDGMRGEDGE 650 Query: 373 VGAAVLRAGSGEGSRRGL 390 +G R GE RGL Sbjct: 651 IGP---RGLPGEAGPRGL 665 Score = 30.8 bits (68), Expect = 2.8 Identities = 53/223 (23%), Positives = 65/223 (29%), Gaps = 28/223 (12%) Query: 94 KGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALLLEL 153 KG G+ PP P P RGP G++ + + KG Sbjct: 1347 KGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGA-----KGEAGA---- 1397 Query: 154 PPRPPPNLQEGGQRAIFQRP-PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG 212 PP G + +P P L P P ++G G + PP P P PG Sbjct: 1398 -EGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPM---GPPGLPG 1453 Query: 213 PTAPPARVREPGR----------AEGASREPRLRSRAARPPPAPG----PGALSRASRSR 258 P E G E + R P A G PG Sbjct: 1454 LKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPG 1513 Query: 259 AAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQ 301 G PGP G K + A G PG G PP Q Sbjct: 1514 PPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPGEVIQ 1556 >gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo sapiens] Length = 1767 Score = 66.6 bits (161), Expect = 5e-11 Identities = 94/359 (26%), Positives = 117/359 (32%), Gaps = 59/359 (16%) Query: 70 PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQ 129 P G G+ G P FP A G + G A P P R +RG T + Sbjct: 801 PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGK 860 Query: 130 LGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRP-------PVYLGNKPT 182 G K + PP PP G + P P P Sbjct: 861 PGPKGTSGG-------------DGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPG 907 Query: 183 PPRQEGSFGGRPKSQPPLPQETAAP------------APQPGPTAPPARVREPGRA--EG 228 P Q G G + K+ PP P P PGP PP PG A EG Sbjct: 908 HPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEG 967 Query: 229 ASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRN-- 286 A +P + + + PA G A G PG GGE P P G G Sbjct: 968 AKGDPGPQGISGKDGPAGLRGFPGERGLPGAQG--APGLKGGEGPQGPPGPVGSPGERGS 1025 Query: 287 ---------PGALGRAAPPSRA-RQDAWGLSGCATVGLRRGDCDRAGSSQPPATSG---- 332 PG G PP A + A G G R G G P +G Sbjct: 1026 AGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGE 1085 Query: 333 NGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQ 391 +G++ ++ G +GE +GP PPG + VGA + G GE RG Q Sbjct: 1086 DGDKGEIGEPGQKGSKGDKGE-----NGPPGPPGLQ--GPVGAPGIAGGDGEPGPRGQQ 1137 Score = 56.2 bits (134), Expect = 6e-08 Identities = 76/280 (27%), Positives = 96/280 (34%), Gaps = 31/280 (11%) Query: 157 PPPNLQEGGQRAIFQRP---------PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAP 207 P + QE +AI Q+ P+ L +P P GS G + +S P PQ Sbjct: 468 PTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGV 527 Query: 208 APQPGPTAPPARVREPGR--AEGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGP 265 PGPT P + PG G EP + PG G PGP Sbjct: 528 QGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGP 587 Query: 266 ----GFHGGEKAAAPRA-PGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCD 320 G G + PR PG G R G LG P Q G++G +G+ Sbjct: 588 PGDDGMRGEDGEIGPRGLPGEAGPR--GLLGPRGTPGAPGQP--GMAGVDGPPGPKGNMG 643 Query: 321 RAGSSQPPATSGNGERCRFCRRRRRRGGGGE-----GEGTHATHGPASPPGRRHDEEVGA 375 G PP GN + G GE G G PPG H + G Sbjct: 644 PQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPG--HPGKEGQ 701 Query: 376 AVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSN 415 + + G +G P PR V GA G R LK + Sbjct: 702 SGEKGALGPPGPQGPIGYPGPRGVKGA----DGVRGLKGS 737 Score = 52.8 bits (125), Expect = 7e-07 Identities = 65/234 (27%), Positives = 82/234 (35%), Gaps = 25/234 (10%) Query: 174 PVYLGNKPTPPRQEGSFG-----GRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEG 228 P+ L P PP ++G G G P PP P+ P GP PP V G G Sbjct: 1157 PIGLQGLPGPPGEKGENGDVGPMGPP--GPPGPRGPQGPNGADGPQGPPGSVGSVG-GVG 1213 Query: 229 ASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGR-NP 287 EP P A G AG PG G K PG G + NP Sbjct: 1214 EKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKG----PPGDDGPKGNP 1269 Query: 288 GALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGN-GERCRFCRRRRRR 346 G +G P + G +G VG +G+ G PP SG G +R Sbjct: 1270 GPVGFPGDPGPPGEP--GPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPG 1327 Query: 347 GGGGEG----EGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPP 396 G EG +G G PPG+ G + +G+ GL+ P P Sbjct: 1328 AAGAEGRQGEKGAKGEAGAEGPPGK-----TGPVGPQGPAGKPGPEGLRGIPGP 1376 Score = 52.8 bits (125), Expect = 7e-07 Identities = 59/204 (28%), Positives = 71/204 (34%), Gaps = 23/204 (11%) Query: 174 PVYLGNKPTPPRQEGSFG----GRPKSQPPLPQETAAPAP--QPGPTAPPARVREPGR-- 225 PV P PP + G G G K + P + P P + GP PP + PG Sbjct: 1271 PVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAG 1330 Query: 226 AEGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGP-GFHGGEKAAAPRAPGGGGG 284 AEG E + A P PG AG+PGP G G PG G Sbjct: 1331 AEGRQGEKGAKGEAGAEGP---PGKTGPVGPQGPAGKPGPEGLRG--------IPGPVGE 1379 Query: 285 RN-PGALGRAAPPSRARQDAW-GLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRR 342 + PGA G+ PP GL G +G G PP G Sbjct: 1380 QGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGT 1439 Query: 343 RRRRGGGGEGEGTHATHGPASPPG 366 + G G+G G GP PPG Sbjct: 1440 QGSPGAKGDG-GIPGPAGPLGPPG 1462 Score = 48.1 bits (113), Expect = 2e-05 Identities = 77/281 (27%), Positives = 96/281 (34%), Gaps = 68/281 (24%) Query: 188 GSFGGRPKSQPPLPQETAAPAPQPGPTAP---------PARVREPGRA-----------E 227 G G R + P P+ A P PGP+ P PGR Sbjct: 763 GQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFP 822 Query: 228 GASREPRLRSRAARPPPAPGPGAL----SRASRSRAAGRPGP-GFHGGEKAAAPRAPGGG 282 GA+ E R A +P P G SR +R G+PGP G GG+ P PG Sbjct: 823 GANGEKGARGVAGKPGPRGQRGPTGPRGSRGARG-PTGKPGPKGTSGGD--GPPGPPGER 879 Query: 283 GGRNP----GALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSG------ 332 G + P G G PP +D GL G +RG+ G + PP G Sbjct: 880 GPQGPQGPVGFPGPKGPPGPPGKD--GLPGHPG---QRGETGFQGKTGPPGPGGVVGPQG 934 Query: 333 -NGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQ 391 GE G GE H GP PPG + GAA G+ +G+ Sbjct: 935 PTGET------------GPIGERGHP--GPPGPPGEQ--GLPGAAGKEGAKGDPGPQGIS 978 Query: 392 LTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGPK 432 P + G F G R L P G GP+ Sbjct: 979 GKDGPAGLRG----FPGERGLP----GAQGAPGLKGGEGPQ 1011 Score = 43.1 bits (100), Expect = 6e-04 Identities = 67/249 (26%), Positives = 83/249 (33%), Gaps = 61/249 (24%) Query: 153 LPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFG--GRPKSQPPLPQE-TAAPAP 209 LP RP P Q PP G K P ++G G GR Q P+ A PA Sbjct: 1034 LPGRPGP-----------QGPPGPAGEKGAPG-EKGPQGPAGRDGVQGPVGLPGPAGPAG 1081 Query: 210 QPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHG 269 PG + EPG+ S+ + + PP GP PG G Sbjct: 1082 SPGEDGDKGEIGEPGQK--GSKGDKGENGPPGPPGLQGPVG-------------APGIAG 1126 Query: 270 GEKAAAPRAPGGGGGR--NPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQP 327 G+ PR G G+ + GA G PP GL G +G+ G P Sbjct: 1127 GDGEPGPRGQQGMFGQKGDEGARGFPGPPGPI-----GLQGLPGPPGEKGENGDVGPMGP 1181 Query: 328 PATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSR 387 P G RG +G + GP PPG VG+ G GE Sbjct: 1182 PGPPG------------PRG----PQGPNGADGPQGPPG-----SVGSV---GGVGEKGE 1217 Query: 388 RGLQLTPPP 396 G P P Sbjct: 1218 PGEAGNPGP 1226 Score = 42.0 bits (97), Expect = 0.001 Identities = 104/437 (23%), Positives = 132/437 (30%), Gaps = 116/437 (26%) Query: 74 GDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNR-GPSAGTSQLGK 132 G+ G G P P KG G PP P PGD R GP + G Sbjct: 553 GEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGP-PGDDGMRGEDGEIGPRGLPGEAGP 611 Query: 133 KTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGN-----KPTPPRQE 187 + GL L PR P A PP GN +P PP Q+ Sbjct: 612 R-----------GL------LGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQ 654 Query: 188 GSFG--GRPKSQPPL-------PQETAAPAPQPGPTAPPARVREPGRA--EGASREPRLR 236 G+ G G P Q P+ PQ A PG PP + G++ +GA P + Sbjct: 655 GNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQ 714 Query: 237 SRAARPPPA-----------------------PG----------------------PGAL 251 P P PG G Sbjct: 715 GPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPE 774 Query: 252 SRASRSRAAGRPGPGFHGGEKA--AAPRAPGGGGGRNP-GALGRAAPPSRARQDAWGLSG 308 R+ G PGP GEK P PG G + P G+ G P A G G Sbjct: 775 GPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPG-----ANGEKG 829 Query: 309 CATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRR 368 V + G + G + P R R R G +GT GP PPG R Sbjct: 830 ARGVAGKPGPRGQRGPTGP----------RGSRGARGPTGKPGPKGTSGGDGPPGPPGER 879 Query: 369 HDE----EVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPR 424 + VG + G + GL P G+ ++ + T P Sbjct: 880 GPQGPQGPVGFPGPKGPPGPPGKDGLPGHP--------------GQRGETGFQGKTGPPG 925 Query: 425 RSGASGPKMVADQTSGI 441 G GP+ +T I Sbjct: 926 PGGVVGPQGPTGETGPI 942 Score = 41.2 bits (95), Expect = 0.002 Identities = 67/258 (25%), Positives = 83/258 (32%), Gaps = 65/258 (25%) Query: 165 GQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPG 224 G+ A+ + P + + P P G G PP Q P PG PP R PG Sbjct: 390 GEPAVVE-PGMLVEGPPGPAGPAGIMG------PPGLQGPTGPPGDPGDRGPPGRPGLPG 442 Query: 225 RAEGASREP--------RLRSRAARPPPAPGPGALSRASRSRA-------------AGRP 263 A+G P R ++ P A ++A +A GRP Sbjct: 443 -ADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRP 501 Query: 264 GP-------GFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRR 316 GP G G P+ P G G PG G+ P R R A G G + Sbjct: 502 GPVGGPGSSGAKGESGDPGPQGPRGVQG-PPGPTGK--PGKRGRPGADGGRGMPGEPGAK 558 Query: 317 GDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPG----RRHDEE 372 GD G P G+ G GP PPG R D E Sbjct: 559 GDRGFDGLPGLPGDKGH-------------------RGERGPQGPPGPPGDDGMRGEDGE 599 Query: 373 VGAAVLRAGSGEGSRRGL 390 +G R GE RGL Sbjct: 600 IGP---RGLPGEAGPRGL 614 Score = 30.8 bits (68), Expect = 2.8 Identities = 53/223 (23%), Positives = 65/223 (29%), Gaps = 28/223 (12%) Query: 94 KGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALLLEL 153 KG G+ PP P P RGP G++ + + KG Sbjct: 1296 KGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGA-----KGEAGA---- 1346 Query: 154 PPRPPPNLQEGGQRAIFQRP-PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG 212 PP G + +P P L P P ++G G + PP P P PG Sbjct: 1347 -EGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPM---GPPGLPG 1402 Query: 213 PTAPPARVREPGR----------AEGASREPRLRSRAARPPPAPG----PGALSRASRSR 258 P E G E + R P A G PG Sbjct: 1403 LKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPG 1462 Query: 259 AAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQ 301 G PGP G K + A G PG G PP Q Sbjct: 1463 PPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPGEVIQ 1505 >gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo sapiens] Length = 1806 Score = 66.6 bits (161), Expect = 5e-11 Identities = 94/359 (26%), Positives = 117/359 (32%), Gaps = 59/359 (16%) Query: 70 PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQ 129 P G G+ G P FP A G + G A P P R +RG T + Sbjct: 840 PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGK 899 Query: 130 LGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRP-------PVYLGNKPT 182 G K + PP PP G + P P P Sbjct: 900 PGPKGTSGG-------------DGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPG 946 Query: 183 PPRQEGSFGGRPKSQPPLPQETAAP------------APQPGPTAPPARVREPGRA--EG 228 P Q G G + K+ PP P P PGP PP PG A EG Sbjct: 947 HPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEG 1006 Query: 229 ASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRN-- 286 A +P + + + PA G A G PG GGE P P G G Sbjct: 1007 AKGDPGPQGISGKDGPAGLRGFPGERGLPGAQG--APGLKGGEGPQGPPGPVGSPGERGS 1064 Query: 287 ---------PGALGRAAPPSRA-RQDAWGLSGCATVGLRRGDCDRAGSSQPPATSG---- 332 PG G PP A + A G G R G G P +G Sbjct: 1065 AGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGE 1124 Query: 333 NGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQ 391 +G++ ++ G +GE +GP PPG + VGA + G GE RG Q Sbjct: 1125 DGDKGEIGEPGQKGSKGDKGE-----NGPPGPPGLQ--GPVGAPGIAGGDGEPGPRGQQ 1176 Score = 56.2 bits (134), Expect = 6e-08 Identities = 76/280 (27%), Positives = 96/280 (34%), Gaps = 31/280 (11%) Query: 157 PPPNLQEGGQRAIFQRP---------PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAP 207 P + QE +AI Q+ P+ L +P P GS G + +S P PQ Sbjct: 507 PTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGV 566 Query: 208 APQPGPTAPPARVREPGR--AEGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGP 265 PGPT P + PG G EP + PG G PGP Sbjct: 567 QGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGP 626 Query: 266 ----GFHGGEKAAAPRA-PGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCD 320 G G + PR PG G R G LG P Q G++G +G+ Sbjct: 627 PGDDGMRGEDGEIGPRGLPGEAGPR--GLLGPRGTPGAPGQP--GMAGVDGPPGPKGNMG 682 Query: 321 RAGSSQPPATSGNGERCRFCRRRRRRGGGGE-----GEGTHATHGPASPPGRRHDEEVGA 375 G PP GN + G GE G G PPG H + G Sbjct: 683 PQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPG--HPGKEGQ 740 Query: 376 AVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSN 415 + + G +G P PR V GA G R LK + Sbjct: 741 SGEKGALGPPGPQGPIGYPGPRGVKGA----DGVRGLKGS 776 Score = 52.8 bits (125), Expect = 7e-07 Identities = 65/234 (27%), Positives = 82/234 (35%), Gaps = 25/234 (10%) Query: 174 PVYLGNKPTPPRQEGSFG-----GRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEG 228 P+ L P PP ++G G G P PP P+ P GP PP V G G Sbjct: 1196 PIGLQGLPGPPGEKGENGDVGPMGPP--GPPGPRGPQGPNGADGPQGPPGSVGSVG-GVG 1252 Query: 229 ASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGR-NP 287 EP P A G AG PG G K PG G + NP Sbjct: 1253 EKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKG----PPGDDGPKGNP 1308 Query: 288 GALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGN-GERCRFCRRRRRR 346 G +G P + G +G VG +G+ G PP SG G +R Sbjct: 1309 GPVGFPGDPGPPGEP--GPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPG 1366 Query: 347 GGGGEG----EGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPP 396 G EG +G G PPG+ G + +G+ GL+ P P Sbjct: 1367 AAGAEGRQGEKGAKGEAGAEGPPGK-----TGPVGPQGPAGKPGPEGLRGIPGP 1415 Score = 52.8 bits (125), Expect = 7e-07 Identities = 59/204 (28%), Positives = 71/204 (34%), Gaps = 23/204 (11%) Query: 174 PVYLGNKPTPPRQEGSFG----GRPKSQPPLPQETAAPAP--QPGPTAPPARVREPGR-- 225 PV P PP + G G G K + P + P P + GP PP + PG Sbjct: 1310 PVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAG 1369 Query: 226 AEGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGP-GFHGGEKAAAPRAPGGGGG 284 AEG E + A P PG AG+PGP G G PG G Sbjct: 1370 AEGRQGEKGAKGEAGAEGP---PGKTGPVGPQGPAGKPGPEGLRG--------IPGPVGE 1418 Query: 285 RN-PGALGRAAPPSRARQDAW-GLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRR 342 + PGA G+ PP GL G +G G PP G Sbjct: 1419 QGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGT 1478 Query: 343 RRRRGGGGEGEGTHATHGPASPPG 366 + G G+G G GP PPG Sbjct: 1479 QGSPGAKGDG-GIPGPAGPLGPPG 1501 Score = 48.1 bits (113), Expect = 2e-05 Identities = 77/281 (27%), Positives = 96/281 (34%), Gaps = 68/281 (24%) Query: 188 GSFGGRPKSQPPLPQETAAPAPQPGPTAP---------PARVREPGRA-----------E 227 G G R + P P+ A P PGP+ P PGR Sbjct: 802 GQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFP 861 Query: 228 GASREPRLRSRAARPPPAPGPGAL----SRASRSRAAGRPGP-GFHGGEKAAAPRAPGGG 282 GA+ E R A +P P G SR +R G+PGP G GG+ P PG Sbjct: 862 GANGEKGARGVAGKPGPRGQRGPTGPRGSRGARG-PTGKPGPKGTSGGD--GPPGPPGER 918 Query: 283 GGRNP----GALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSG------ 332 G + P G G PP +D GL G +RG+ G + PP G Sbjct: 919 GPQGPQGPVGFPGPKGPPGPPGKD--GLPGHPG---QRGETGFQGKTGPPGPGGVVGPQG 973 Query: 333 -NGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQ 391 GE G GE H GP PPG + GAA G+ +G+ Sbjct: 974 PTGET------------GPIGERGHP--GPPGPPGEQ--GLPGAAGKEGAKGDPGPQGIS 1017 Query: 392 LTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGPK 432 P + G F G R L P G GP+ Sbjct: 1018 GKDGPAGLRG----FPGERGLP----GAQGAPGLKGGEGPQ 1050 Score = 43.1 bits (100), Expect = 6e-04 Identities = 67/249 (26%), Positives = 83/249 (33%), Gaps = 61/249 (24%) Query: 153 LPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFG--GRPKSQPPLPQE-TAAPAP 209 LP RP P Q PP G K P ++G G GR Q P+ A PA Sbjct: 1073 LPGRPGP-----------QGPPGPAGEKGAPG-EKGPQGPAGRDGVQGPVGLPGPAGPAG 1120 Query: 210 QPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHG 269 PG + EPG+ S+ + + PP GP PG G Sbjct: 1121 SPGEDGDKGEIGEPGQK--GSKGDKGENGPPGPPGLQGPVG-------------APGIAG 1165 Query: 270 GEKAAAPRAPGGGGGR--NPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQP 327 G+ PR G G+ + GA G PP GL G +G+ G P Sbjct: 1166 GDGEPGPRGQQGMFGQKGDEGARGFPGPPGPI-----GLQGLPGPPGEKGENGDVGPMGP 1220 Query: 328 PATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSR 387 P G RG +G + GP PPG VG+ G GE Sbjct: 1221 PGPPG------------PRG----PQGPNGADGPQGPPG-----SVGSV---GGVGEKGE 1256 Query: 388 RGLQLTPPP 396 G P P Sbjct: 1257 PGEAGNPGP 1265 Score = 42.0 bits (97), Expect = 0.001 Identities = 104/437 (23%), Positives = 132/437 (30%), Gaps = 116/437 (26%) Query: 74 GDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNR-GPSAGTSQLGK 132 G+ G G P P KG G PP P PGD R GP + G Sbjct: 592 GEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGP-PGDDGMRGEDGEIGPRGLPGEAGP 650 Query: 133 KTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGN-----KPTPPRQE 187 + GL L PR P A PP GN +P PP Q+ Sbjct: 651 R-----------GL------LGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQ 693 Query: 188 GSFG--GRPKSQPPL-------PQETAAPAPQPGPTAPPARVREPGRA--EGASREPRLR 236 G+ G G P Q P+ PQ A PG PP + G++ +GA P + Sbjct: 694 GNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQ 753 Query: 237 SRAARPPPA-----------------------PG----------------------PGAL 251 P P PG G Sbjct: 754 GPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPE 813 Query: 252 SRASRSRAAGRPGPGFHGGEKA--AAPRAPGGGGGRNP-GALGRAAPPSRARQDAWGLSG 308 R+ G PGP GEK P PG G + P G+ G P A G G Sbjct: 814 GPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPG-----ANGEKG 868 Query: 309 CATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRR 368 V + G + G + P R R R G +GT GP PPG R Sbjct: 869 ARGVAGKPGPRGQRGPTGP----------RGSRGARGPTGKPGPKGTSGGDGPPGPPGER 918 Query: 369 HDE----EVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPR 424 + VG + G + GL P G+ ++ + T P Sbjct: 919 GPQGPQGPVGFPGPKGPPGPPGKDGLPGHP--------------GQRGETGFQGKTGPPG 964 Query: 425 RSGASGPKMVADQTSGI 441 G GP+ +T I Sbjct: 965 PGGVVGPQGPTGETGPI 981 Score = 41.2 bits (95), Expect = 0.002 Identities = 67/258 (25%), Positives = 83/258 (32%), Gaps = 65/258 (25%) Query: 165 GQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPG 224 G+ A+ + P + + P P G G PP Q P PG PP R PG Sbjct: 429 GEPAVVE-PGMLVEGPPGPAGPAGIMG------PPGLQGPTGPPGDPGDRGPPGRPGLPG 481 Query: 225 RAEGASREP--------RLRSRAARPPPAPGPGALSRASRSRA-------------AGRP 263 A+G P R ++ P A ++A +A GRP Sbjct: 482 -ADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRP 540 Query: 264 GP-------GFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRR 316 GP G G P+ P G G PG G+ P R R A G G + Sbjct: 541 GPVGGPGSSGAKGESGDPGPQGPRGVQG-PPGPTGK--PGKRGRPGADGGRGMPGEPGAK 597 Query: 317 GDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPG----RRHDEE 372 GD G P G+ G GP PPG R D E Sbjct: 598 GDRGFDGLPGLPGDKGH-------------------RGERGPQGPPGPPGDDGMRGEDGE 638 Query: 373 VGAAVLRAGSGEGSRRGL 390 +G R GE RGL Sbjct: 639 IGP---RGLPGEAGPRGL 653 Score = 30.8 bits (68), Expect = 2.8 Identities = 53/223 (23%), Positives = 65/223 (29%), Gaps = 28/223 (12%) Query: 94 KGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALLLEL 153 KG G+ PP P P RGP G++ + + KG Sbjct: 1335 KGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGA-----KGEAGA---- 1385 Query: 154 PPRPPPNLQEGGQRAIFQRP-PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG 212 PP G + +P P L P P ++G G + PP P P PG Sbjct: 1386 -EGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPM---GPPGLPG 1441 Query: 213 PTAPPARVREPGR----------AEGASREPRLRSRAARPPPAPG----PGALSRASRSR 258 P E G E + R P A G PG Sbjct: 1442 LKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPG 1501 Query: 259 AAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQ 301 G PGP G K + A G PG G PP Q Sbjct: 1502 PPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPGEVIQ 1544 >gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein [Homo sapiens] Length = 1650 Score = 62.8 bits (151), Expect = 7e-10 Identities = 100/371 (26%), Positives = 122/371 (32%), Gaps = 83/371 (22%) Query: 70 PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRH-RKNRGPSAGTS 128 P G G+ G L P FP A G + G + P G+ P R RGP T Sbjct: 712 PGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPR-GERGPTGPRGQRGPRGATG 770 Query: 129 QLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIF--QRPPVYLGNKPTP--- 183 + G K T G P PP G+R + Q P + G K P Sbjct: 771 KSGAKG--------TSGGDG------PHGPP-----GERGLPGPQGPNGFPGPKGPPGPP 811 Query: 184 --------PRQEGSFGGRPKSQPPLPQETAAP------------APQPGPTAPPARVREP 223 P Q G G + K+ PP P P PGP PP P Sbjct: 812 GKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLP 871 Query: 224 GRA--EGASREPRLRSRAARPPPAP---GPGALS--RASRSRAAGRPGPGFHGGEKAAAP 276 G A EG +P PP AP GP L R GPG G E + P Sbjct: 872 GTAGKEGTKGDP-------GPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGP 924 Query: 277 RAPGGGGGRN-----------PGALGRAAPPSRARQDA----WGLSGCATVGLRRGDCDR 321 P G G PG G PP A + G G +G Sbjct: 925 PGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGL 984 Query: 322 AGSSQPPATSG-NGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRA 380 G + PP +G +G++ ++ G +GE HGP PPG VG Sbjct: 985 PGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGE-----HGPPGPPG--PIGPVGQPGAAG 1037 Query: 381 GSGEGSRRGLQ 391 GE RG Q Sbjct: 1038 ADGEPGARGPQ 1048 Score = 50.1 bits (118), Expect = 5e-06 Identities = 67/260 (25%), Positives = 88/260 (33%), Gaps = 45/260 (17%) Query: 154 PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPR------QEGSFGGRPKSQPPLPQETAAP 207 PP P + G + PV P PP Q+G+ G R + P + +P Sbjct: 1164 PPGPKGPTGDDGPKG--NPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEP--GQPGSP 1219 Query: 208 APQPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAP--GPGALSRASRSRAAGRPGP 265 P G PP + + G A E R + A+ P PG + AG+PGP Sbjct: 1220 GPT-GENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGP 1278 Query: 266 -GFHGGEKAAAPRAPGGGGGRN-PGALGRAAPPSRARQDAW-GLSGCATVGLRRGDCDRA 322 G G PG G + PGA G+A PP GL G A +G Sbjct: 1279 DGLRG--------LPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLI 1330 Query: 323 GSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGS 382 G PP G +G GP PG++ E+G Sbjct: 1331 GLIGPPGEQGE-------------------KGDRGLPGPQGSPGQK--GEMGIPGASGPI 1369 Query: 383 GEGSRRGLQLTPPPRRVHGA 402 G G GL P+ GA Sbjct: 1370 GPGGPPGLPGPAGPKGAKGA 1389 Score = 45.1 bits (105), Expect = 1e-04 Identities = 69/252 (27%), Positives = 86/252 (34%), Gaps = 46/252 (18%) Query: 174 PVYLGNKPTPPRQEGSFG-----GRPKSQPPLPQETAAPAPQPGPTAPPARVRE---PGR 225 P+ L P P ++G G G P PP P+ A P GP PP V PG Sbjct: 1068 PIGLQGLPGPSGEKGETGDVGPMGPPG--PPGPRGPAGPNGADGPQGPPGGVGNLGPPGE 1125 Query: 226 --AEGASREPRLRSRAARPPPAPGP-GALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGG 282 G S P ++ P GP G S G PGP P+ P G Sbjct: 1126 KGEPGESGSPGIQGE----PGVKGPRGERGEKGESGQPGEPGP--------PGPKGPTGD 1173 Query: 283 GG--RNPGALGRAAPPS-------RARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGN 333 G NPG +G P R + A G G + G G + PP G Sbjct: 1174 DGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGK 1233 Query: 334 GERCRFCRRRRRRGG-GGEGE-------GTHATHGPASPPGRRHDEEVGAAVLRAGSGEG 385 R+GG G +G+ G GPA P G+ + G L G+ Sbjct: 1234 RGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPD--GLRGLPGSVGQQ 1291 Query: 386 SRRGL--QLTPP 395 R G Q PP Sbjct: 1292 GRPGATGQAGPP 1303 Score = 43.5 bits (101), Expect = 4e-04 Identities = 93/361 (25%), Positives = 113/361 (31%), Gaps = 90/361 (24%) Query: 110 PGDHHPRHRKNRGPSAGTSQLGK-KTQCRSLFLRTKGLCALLLE---LPP-----RPPPN 160 P + P HR R P S+L + + Q T G +LE LPP P Sbjct: 236 PQNQQP-HRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEEEILESSLLPPLEEAAHGPRG 294 Query: 161 LQ-EGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPAR 219 L+ E G+ A+ + P + + P P G G PP Q P PG PP R Sbjct: 295 LKGEKGEPAVLE-PGMLVEGPPGPEGPAGLIG------PPGIQGNPGPVGDPGERGPPGR 347 Query: 220 VREPGRAEGASREP--------RLRSRAARPPPAPG--------------------PGAL 251 PG ++GA P R S P PG + Sbjct: 348 AGLPG-SDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLALRGPPGPM 406 Query: 252 SRASRSRAAGRPG-PGFHGGEKAAAPRAPGGGGGRN--PGALGRAA-------------P 295 R G+PG PG G P+ P G G PG GR P Sbjct: 407 GYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGDP 466 Query: 296 PSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGE---- 351 + + GL G RGD G PP G RG GE Sbjct: 467 GVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDG------------ERGDDGEIGPR 514 Query: 352 ---GE-GTHATHGPASPPG-------RRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVH 400 GE G GP PPG R D G GE G Q TP + + Sbjct: 515 GLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLP 574 Query: 401 G 401 G Sbjct: 575 G 575 Score = 42.0 bits (97), Expect = 0.001 Identities = 50/191 (26%), Positives = 62/191 (32%), Gaps = 40/191 (20%) Query: 174 PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGR--AEGASR 231 PV L PP G G + + P + T + GP PP + G+ A GA Sbjct: 981 PVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADG 1040 Query: 232 EPRLR-------------SRAARPPPA-------PGP-GALSRASRSRAAGRPGPGFHGG 270 EP R +R PP PGP G G PGP Sbjct: 1041 EPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGP----- 1095 Query: 271 EKAAAPRAPGGGGGRN-----PGALGRAAPPSR----ARQDAWGLSGCATVGLRRGDCDR 321 PR P G G + PG +G PP + G+ G V RG+ Sbjct: 1096 ---PGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGE 1152 Query: 322 AGSSQPPATSG 332 G S P G Sbjct: 1153 KGESGQPGEPG 1163 Score = 38.5 bits (88), Expect = 0.014 Identities = 93/357 (26%), Positives = 116/357 (32%), Gaps = 69/357 (19%) Query: 70 PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLP----HPGDHHPRHRKNRGPSA 125 P ++G G+ A G P P KG +G P LP H GD + GP Sbjct: 445 PGKAGRRGRAGADGARGMPGDPGVKGDRGFDG--LPGLPGEKGHRGDTGAQGLP--GPPG 500 Query: 126 GTSQLGKKTQCRSLFLR----TKGLCALLLELPPRPPPNLQ-EGGQRAIF--QRPPVYLG 178 + G + L +GL L P+ PP + G R + Q P LG Sbjct: 501 EDGERGDDGEIGPRGLPGESGPRGL------LGPKGPPGIPGPPGVRGMDGPQGPKGSLG 554 Query: 179 --NKPTPPRQEGSFG--GRPKSQPPL-PQETAAPAPQPGPTAPPARVREPGRAEGASREP 233 +P PP Q+G+ G G P Q + P P +PG P PG G P Sbjct: 555 PQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHP-GKEGPP 613 Query: 234 RLRSRAARPPPA-----PGPGALSRASRSRAA-------GRPG-PGFHGGEKAAAPRA-- 278 + P PGP + R G G PGF G R Sbjct: 614 GTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEV 673 Query: 279 --PGGGGGRNP-------GALGRAAPPS-RARQDAWGLSGCATVGLRRGDCDRAGSSQPP 328 PG G P G G PP + G+ G R+G G P Sbjct: 674 GVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFP 733 Query: 329 ATSGN-------------GERCRFCRRRRRRGGGGEGE----GTHATHGPASPPGRR 368 SG GER R +R G G+ GT GP PPG R Sbjct: 734 GASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 790 Score = 36.2 bits (82), Expect = 0.068 Identities = 78/303 (25%), Positives = 97/303 (32%), Gaps = 67/303 (22%) Query: 181 PTPPRQEGSFGGRPKSQP-PLPQETAAPAPQPGPTAPPARVREPG-RAEGASREPR--LR 236 P PP ++G G + P LP E + P GP PP PG R + P+ L Sbjct: 496 PGPPGEDGERGDDGEIGPRGLPGE-SGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLG 554 Query: 237 SRAARPPPA----------PGP-GALSRASRSRAAGRPG-PGFHGGE-------KAAAPR 277 + PP PGP GA+ G+PG PG G + K P Sbjct: 555 PQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPG 614 Query: 278 APGGGGGRNP-GALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGN--- 333 G G P G LG P G+ G + +G G P G+ Sbjct: 615 TKGNQGPSGPQGPLGYPGPR--------GVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGV 666 Query: 334 -GERCRFCRRRRRRGGGGEG-EGTHATHGPASPPGRRHDE-------------------E 372 G+R R G EG +G G PPG ++ Sbjct: 667 KGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGS 726 Query: 373 VGAAVLRAGSGEGSRRGLQLTPPPRRVHGAL----QRFGGGRNLKSNWMSTTRTPRRSGA 428 +G SGE RGL PR G QR G KS T SG Sbjct: 727 LGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGT------SGG 780 Query: 429 SGP 431 GP Sbjct: 781 DGP 783 Score = 30.0 bits (66), Expect = 4.9 Identities = 42/153 (27%), Positives = 47/153 (30%), Gaps = 30/153 (19%) Query: 174 PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPAR--VREPGRAEGASR 231 P KP P G G + P A P PGP PP +R A+G Sbjct: 1269 PAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGP---PGPVGPPGLPGLRGDAGAKGEKG 1325 Query: 232 EPRL------------RSRAARPPP--APG-------PGALSRASRSRAAGRPGPGFHGG 270 P L + P P +PG PGA G PGP G Sbjct: 1326 HPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKG 1385 Query: 271 EKAAAPRAPGGGGGRN--PGALGRAAPPSRARQ 301 K A PGG G G G PP Q Sbjct: 1386 AKGAT--GPGGPKGEKGVQGPPGHPGPPGEVIQ 1416 >gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein [Homo sapiens] Length = 1629 Score = 62.8 bits (151), Expect = 7e-10 Identities = 100/371 (26%), Positives = 122/371 (32%), Gaps = 83/371 (22%) Query: 70 PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRH-RKNRGPSAGTS 128 P G G+ G L P FP A G + G + P G+ P R RGP T Sbjct: 691 PGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPR-GERGPTGPRGQRGPRGATG 749 Query: 129 QLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIF--QRPPVYLGNKPTP--- 183 + G K T G P PP G+R + Q P + G K P Sbjct: 750 KSGAKG--------TSGGDG------PHGPP-----GERGLPGPQGPNGFPGPKGPPGPP 790 Query: 184 --------PRQEGSFGGRPKSQPPLPQETAAP------------APQPGPTAPPARVREP 223 P Q G G + K+ PP P P PGP PP P Sbjct: 791 GKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLP 850 Query: 224 GRA--EGASREPRLRSRAARPPPAP---GPGALS--RASRSRAAGRPGPGFHGGEKAAAP 276 G A EG +P PP AP GP L R GPG G E + P Sbjct: 851 GTAGKEGTKGDP-------GPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGP 903 Query: 277 RAPGGGGGRN-----------PGALGRAAPPSRARQDA----WGLSGCATVGLRRGDCDR 321 P G G PG G PP A + G G +G Sbjct: 904 PGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGL 963 Query: 322 AGSSQPPATSG-NGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRA 380 G + PP +G +G++ ++ G +GE HGP PPG VG Sbjct: 964 PGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGE-----HGPPGPPG--PIGPVGQPGAAG 1016 Query: 381 GSGEGSRRGLQ 391 GE RG Q Sbjct: 1017 ADGEPGARGPQ 1027 Score = 50.1 bits (118), Expect = 5e-06 Identities = 67/260 (25%), Positives = 88/260 (33%), Gaps = 45/260 (17%) Query: 154 PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPR------QEGSFGGRPKSQPPLPQETAAP 207 PP P + G + PV P PP Q+G+ G R + P + +P Sbjct: 1143 PPGPKGPTGDDGPKG--NPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEP--GQPGSP 1198 Query: 208 APQPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAP--GPGALSRASRSRAAGRPGP 265 P G PP + + G A E R + A+ P PG + AG+PGP Sbjct: 1199 GPT-GENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGP 1257 Query: 266 -GFHGGEKAAAPRAPGGGGGRN-PGALGRAAPPSRARQDAW-GLSGCATVGLRRGDCDRA 322 G G PG G + PGA G+A PP GL G A +G Sbjct: 1258 DGLRG--------LPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLI 1309 Query: 323 GSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGS 382 G PP G +G GP PG++ E+G Sbjct: 1310 GLIGPPGEQGE-------------------KGDRGLPGPQGSPGQK--GEMGIPGASGPI 1348 Query: 383 GEGSRRGLQLTPPPRRVHGA 402 G G GL P+ GA Sbjct: 1349 GPGGPPGLPGPAGPKGAKGA 1368 Score = 45.1 bits (105), Expect = 1e-04 Identities = 76/282 (26%), Positives = 94/282 (33%), Gaps = 56/282 (19%) Query: 163 EGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVRE 222 EGGQR Q + + P+Q+ S RP++Q P Q P G PA V E Sbjct: 229 EGGQRERPQNQQPHRAQRS--PQQQPSRLHRPQNQEPQSQAAHGPRGLKGEKGEPA-VLE 285 Query: 223 PGRAEGASREPRLRSRAARPPPA---PGP-------GALSRASRSRAAGRPGP------- 265 PG P + PP PGP G RA + G PGP Sbjct: 286 PGMLVEGPPGPEGPAGLIGPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLML 345 Query: 266 ----GFHGGEKA---------------------AAPRAPGGGGGRNPGALGRAAPPSRAR 300 G GG+K P P G GR PG LG+ P Sbjct: 346 PFRFGSGGGDKGPVVAAQEAQAQAILQQARLALRGPPGPMGYTGR-PGPLGQPGSP---- 400 Query: 301 QDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHG 360 GL G + +G G + PP +G R R G G +G G Sbjct: 401 ----GLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGDPGV-KGDRGFDG 455 Query: 361 -PASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHG 401 P P + H + GA L GE RG PR + G Sbjct: 456 LPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPG 497 Score = 45.1 bits (105), Expect = 1e-04 Identities = 69/252 (27%), Positives = 86/252 (34%), Gaps = 46/252 (18%) Query: 174 PVYLGNKPTPPRQEGSFG-----GRPKSQPPLPQETAAPAPQPGPTAPPARVRE---PGR 225 P+ L P P ++G G G P PP P+ A P GP PP V PG Sbjct: 1047 PIGLQGLPGPSGEKGETGDVGPMGPPG--PPGPRGPAGPNGADGPQGPPGGVGNLGPPGE 1104 Query: 226 --AEGASREPRLRSRAARPPPAPGP-GALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGG 282 G S P ++ P GP G S G PGP P+ P G Sbjct: 1105 KGEPGESGSPGIQGE----PGVKGPRGERGEKGESGQPGEPGP--------PGPKGPTGD 1152 Query: 283 GG--RNPGALGRAAPPS-------RARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGN 333 G NPG +G P R + A G G + G G + PP G Sbjct: 1153 DGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGK 1212 Query: 334 GERCRFCRRRRRRGG-GGEGE-------GTHATHGPASPPGRRHDEEVGAAVLRAGSGEG 385 R+GG G +G+ G GPA P G+ + G L G+ Sbjct: 1213 RGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPD--GLRGLPGSVGQQ 1270 Query: 386 SRRGL--QLTPP 395 R G Q PP Sbjct: 1271 GRPGATGQAGPP 1282 Score = 42.0 bits (97), Expect = 0.001 Identities = 50/191 (26%), Positives = 62/191 (32%), Gaps = 40/191 (20%) Query: 174 PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGR--AEGASR 231 PV L PP G G + + P + T + GP PP + G+ A GA Sbjct: 960 PVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADG 1019 Query: 232 EPRLR-------------SRAARPPPA-------PGP-GALSRASRSRAAGRPGPGFHGG 270 EP R +R PP PGP G G PGP Sbjct: 1020 EPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGP----- 1074 Query: 271 EKAAAPRAPGGGGGRN-----PGALGRAAPPSR----ARQDAWGLSGCATVGLRRGDCDR 321 PR P G G + PG +G PP + G+ G V RG+ Sbjct: 1075 ---PGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGE 1131 Query: 322 AGSSQPPATSG 332 G S P G Sbjct: 1132 KGESGQPGEPG 1142 Score = 38.5 bits (88), Expect = 0.014 Identities = 93/357 (26%), Positives = 116/357 (32%), Gaps = 69/357 (19%) Query: 70 PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLP----HPGDHHPRHRKNRGPSA 125 P ++G G+ A G P P KG +G P LP H GD + GP Sbjct: 424 PGKAGRRGRAGADGARGMPGDPGVKGDRGFDG--LPGLPGEKGHRGDTGAQGLP--GPPG 479 Query: 126 GTSQLGKKTQCRSLFLR----TKGLCALLLELPPRPPPNLQ-EGGQRAIF--QRPPVYLG 178 + G + L +GL L P+ PP + G R + Q P LG Sbjct: 480 EDGERGDDGEIGPRGLPGESGPRGL------LGPKGPPGIPGPPGVRGMDGPQGPKGSLG 533 Query: 179 --NKPTPPRQEGSFG--GRPKSQPPL-PQETAAPAPQPGPTAPPARVREPGRAEGASREP 233 +P PP Q+G+ G G P Q + P P +PG P PG G P Sbjct: 534 PQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHP-GKEGPP 592 Query: 234 RLRSRAARPPPA-----PGPGALSRASRSRAA-------GRPG-PGFHGGEKAAAPRA-- 278 + P PGP + R G G PGF G R Sbjct: 593 GTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEV 652 Query: 279 --PGGGGGRNP-------GALGRAAPPS-RARQDAWGLSGCATVGLRRGDCDRAGSSQPP 328 PG G P G G PP + G+ G R+G G P Sbjct: 653 GVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFP 712 Query: 329 ATSGN-------------GERCRFCRRRRRRGGGGEGE----GTHATHGPASPPGRR 368 SG GER R +R G G+ GT GP PPG R Sbjct: 713 GASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 769 Score = 36.2 bits (82), Expect = 0.068 Identities = 78/303 (25%), Positives = 97/303 (32%), Gaps = 67/303 (22%) Query: 181 PTPPRQEGSFGGRPKSQP-PLPQETAAPAPQPGPTAPPARVREPG-RAEGASREPR--LR 236 P PP ++G G + P LP E + P GP PP PG R + P+ L Sbjct: 475 PGPPGEDGERGDDGEIGPRGLPGE-SGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLG 533 Query: 237 SRAARPPPA----------PGP-GALSRASRSRAAGRPG-PGFHGGE-------KAAAPR 277 + PP PGP GA+ G+PG PG G + K P Sbjct: 534 PQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPG 593 Query: 278 APGGGGGRNP-GALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGN--- 333 G G P G LG P G+ G + +G G P G+ Sbjct: 594 TKGNQGPSGPQGPLGYPGPR--------GVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGV 645 Query: 334 -GERCRFCRRRRRRGGGGEG-EGTHATHGPASPPGRRHDE-------------------E 372 G+R R G EG +G G PPG ++ Sbjct: 646 KGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGS 705 Query: 373 VGAAVLRAGSGEGSRRGLQLTPPPRRVHGAL----QRFGGGRNLKSNWMSTTRTPRRSGA 428 +G SGE RGL PR G QR G KS T SG Sbjct: 706 LGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGT------SGG 759 Query: 429 SGP 431 GP Sbjct: 760 DGP 762 Score = 30.0 bits (66), Expect = 4.9 Identities = 42/153 (27%), Positives = 47/153 (30%), Gaps = 30/153 (19%) Query: 174 PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPAR--VREPGRAEGASR 231 P KP P G G + P A P PGP PP +R A+G Sbjct: 1248 PAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGP---PGPVGPPGLPGLRGDAGAKGEKG 1304 Query: 232 EPRL------------RSRAARPPP--APG-------PGALSRASRSRAAGRPGPGFHGG 270 P L + P P +PG PGA G PGP G Sbjct: 1305 HPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKG 1364 Query: 271 EKAAAPRAPGGGGGRN--PGALGRAAPPSRARQ 301 K A PGG G G G PP Q Sbjct: 1365 AKGAT--GPGGPKGEKGVQGPPGHPGPPGEVIQ 1395 >gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein [Homo sapiens] Length = 1736 Score = 62.8 bits (151), Expect = 7e-10 Identities = 100/371 (26%), Positives = 122/371 (32%), Gaps = 83/371 (22%) Query: 70 PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRH-RKNRGPSAGTS 128 P G G+ G L P FP A G + G + P G+ P R RGP T Sbjct: 798 PGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPR-GERGPTGPRGQRGPRGATG 856 Query: 129 QLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIF--QRPPVYLGNKPTP--- 183 + G K T G P PP G+R + Q P + G K P Sbjct: 857 KSGAKG--------TSGGDG------PHGPP-----GERGLPGPQGPNGFPGPKGPPGPP 897 Query: 184 --------PRQEGSFGGRPKSQPPLPQETAAP------------APQPGPTAPPARVREP 223 P Q G G + K+ PP P P PGP PP P Sbjct: 898 GKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLP 957 Query: 224 GRA--EGASREPRLRSRAARPPPAP---GPGALS--RASRSRAAGRPGPGFHGGEKAAAP 276 G A EG +P PP AP GP L R GPG G E + P Sbjct: 958 GTAGKEGTKGDP-------GPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGP 1010 Query: 277 RAPGGGGGRN-----------PGALGRAAPPSRARQDA----WGLSGCATVGLRRGDCDR 321 P G G PG G PP A + G G +G Sbjct: 1011 PGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGL 1070 Query: 322 AGSSQPPATSG-NGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRA 380 G + PP +G +G++ ++ G +GE HGP PPG VG Sbjct: 1071 PGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGE-----HGPPGPPG--PIGPVGQPGAAG 1123 Query: 381 GSGEGSRRGLQ 391 GE RG Q Sbjct: 1124 ADGEPGARGPQ 1134 Score = 50.1 bits (118), Expect = 5e-06 Identities = 67/260 (25%), Positives = 88/260 (33%), Gaps = 45/260 (17%) Query: 154 PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPR------QEGSFGGRPKSQPPLPQETAAP 207 PP P + G + PV P PP Q+G+ G R + P + +P Sbjct: 1250 PPGPKGPTGDDGPKG--NPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEP--GQPGSP 1305 Query: 208 APQPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAP--GPGALSRASRSRAAGRPGP 265 P G PP + + G A E R + A+ P PG + AG+PGP Sbjct: 1306 GPT-GENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGP 1364 Query: 266 -GFHGGEKAAAPRAPGGGGGRN-PGALGRAAPPSRARQDAW-GLSGCATVGLRRGDCDRA 322 G G PG G + PGA G+A PP GL G A +G Sbjct: 1365 DGLRG--------LPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLI 1416 Query: 323 GSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGS 382 G PP G +G GP PG++ E+G Sbjct: 1417 GLIGPPGEQGE-------------------KGDRGLPGPQGSPGQK--GEMGIPGASGPI 1455 Query: 383 GEGSRRGLQLTPPPRRVHGA 402 G G GL P+ GA Sbjct: 1456 GPGGPPGLPGPAGPKGAKGA 1475 Score = 45.1 bits (105), Expect = 1e-04 Identities = 69/252 (27%), Positives = 86/252 (34%), Gaps = 46/252 (18%) Query: 174 PVYLGNKPTPPRQEGSFG-----GRPKSQPPLPQETAAPAPQPGPTAPPARVRE---PGR 225 P+ L P P ++G G G P PP P+ A P GP PP V PG Sbjct: 1154 PIGLQGLPGPSGEKGETGDVGPMGPPG--PPGPRGPAGPNGADGPQGPPGGVGNLGPPGE 1211 Query: 226 --AEGASREPRLRSRAARPPPAPGP-GALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGG 282 G S P ++ P GP G S G PGP P+ P G Sbjct: 1212 KGEPGESGSPGIQGE----PGVKGPRGERGEKGESGQPGEPGP--------PGPKGPTGD 1259 Query: 283 GG--RNPGALGRAAPPS-------RARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGN 333 G NPG +G P R + A G G + G G + PP G Sbjct: 1260 DGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGK 1319 Query: 334 GERCRFCRRRRRRGG-GGEGE-------GTHATHGPASPPGRRHDEEVGAAVLRAGSGEG 385 R+GG G +G+ G GPA P G+ + G L G+ Sbjct: 1320 RGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPD--GLRGLPGSVGQQ 1377 Query: 386 SRRGL--QLTPP 395 R G Q PP Sbjct: 1378 GRPGATGQAGPP 1389 Score = 43.1 bits (100), Expect = 6e-04 Identities = 75/298 (25%), Positives = 89/298 (29%), Gaps = 79/298 (26%) Query: 163 EGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVRE 222 E G+ A+ + P + + P P G G PP Q P PG PP R Sbjct: 384 EKGEPAVLE-PGMLVEGPPGPEGPAGLIG------PPGIQGNPGPVGDPGERGPPGRAGL 436 Query: 223 PGRAEGASREP--------RLRSRAARPPPAPG--------------------PGALSRA 254 PG ++GA P R S P PG + Sbjct: 437 PG-SDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLALRGPPGPMGYT 495 Query: 255 SRSRAAGRPG-PGFHGGEKAAAPRAPGGGGGRN--PGALGRAA-------------PPSR 298 R G+PG PG G P+ P G G PG GR P + Sbjct: 496 GRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGDPGVK 555 Query: 299 ARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGE------- 351 + GL G RGD G PP G RG GE Sbjct: 556 GDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDG------------ERGDDGEIGPRGLP 603 Query: 352 GE-GTHATHGPASPPG-------RRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHG 401 GE G GP PPG R D G GE G Q TP + + G Sbjct: 604 GESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPG 661 Score = 42.0 bits (97), Expect = 0.001 Identities = 50/191 (26%), Positives = 62/191 (32%), Gaps = 40/191 (20%) Query: 174 PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGR--AEGASR 231 PV L PP G G + + P + T + GP PP + G+ A GA Sbjct: 1067 PVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADG 1126 Query: 232 EPRLR-------------SRAARPPPA-------PGP-GALSRASRSRAAGRPGPGFHGG 270 EP R +R PP PGP G G PGP Sbjct: 1127 EPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGP----- 1181 Query: 271 EKAAAPRAPGGGGGRN-----PGALGRAAPPSR----ARQDAWGLSGCATVGLRRGDCDR 321 PR P G G + PG +G PP + G+ G V RG+ Sbjct: 1182 ---PGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGE 1238 Query: 322 AGSSQPPATSG 332 G S P G Sbjct: 1239 KGESGQPGEPG 1249 Score = 38.5 bits (88), Expect = 0.014 Identities = 93/357 (26%), Positives = 116/357 (32%), Gaps = 69/357 (19%) Query: 70 PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLP----HPGDHHPRHRKNRGPSA 125 P ++G G+ A G P P KG +G P LP H GD + GP Sbjct: 531 PGKAGRRGRAGADGARGMPGDPGVKGDRGFDG--LPGLPGEKGHRGDTGAQGLP--GPPG 586 Query: 126 GTSQLGKKTQCRSLFLR----TKGLCALLLELPPRPPPNLQ-EGGQRAIF--QRPPVYLG 178 + G + L +GL L P+ PP + G R + Q P LG Sbjct: 587 EDGERGDDGEIGPRGLPGESGPRGL------LGPKGPPGIPGPPGVRGMDGPQGPKGSLG 640 Query: 179 --NKPTPPRQEGSFG--GRPKSQPPL-PQETAAPAPQPGPTAPPARVREPGRAEGASREP 233 +P PP Q+G+ G G P Q + P P +PG P PG G P Sbjct: 641 PQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHP-GKEGPP 699 Query: 234 RLRSRAARPPPA-----PGPGALSRASRSRAA-------GRPG-PGFHGGEKAAAPRA-- 278 + P PGP + R G G PGF G R Sbjct: 700 GTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEV 759 Query: 279 --PGGGGGRNP-------GALGRAAPPS-RARQDAWGLSGCATVGLRRGDCDRAGSSQPP 328 PG G P G G PP + G+ G R+G G P Sbjct: 760 GVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFP 819 Query: 329 ATSGN-------------GERCRFCRRRRRRGGGGEGE----GTHATHGPASPPGRR 368 SG GER R +R G G+ GT GP PPG R Sbjct: 820 GASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGER 876 Score = 36.2 bits (82), Expect = 0.068 Identities = 78/303 (25%), Positives = 97/303 (32%), Gaps = 67/303 (22%) Query: 181 PTPPRQEGSFGGRPKSQP-PLPQETAAPAPQPGPTAPPARVREPG-RAEGASREPR--LR 236 P PP ++G G + P LP E + P GP PP PG R + P+ L Sbjct: 582 PGPPGEDGERGDDGEIGPRGLPGE-SGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLG 640 Query: 237 SRAARPPPA----------PGP-GALSRASRSRAAGRPG-PGFHGGE-------KAAAPR 277 + PP PGP GA+ G+PG PG G + K P Sbjct: 641 PQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPG 700 Query: 278 APGGGGGRNP-GALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGN--- 333 G G P G LG P G+ G + +G G P G+ Sbjct: 701 TKGNQGPSGPQGPLGYPGPR--------GVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGV 752 Query: 334 -GERCRFCRRRRRRGGGGEG-EGTHATHGPASPPGRRHDE-------------------E 372 G+R R G EG +G G PPG ++ Sbjct: 753 KGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGS 812 Query: 373 VGAAVLRAGSGEGSRRGLQLTPPPRRVHGAL----QRFGGGRNLKSNWMSTTRTPRRSGA 428 +G SGE RGL PR G QR G KS T SG Sbjct: 813 LGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGT------SGG 866 Query: 429 SGP 431 GP Sbjct: 867 DGP 869 Score = 30.0 bits (66), Expect = 4.9 Identities = 42/153 (27%), Positives = 47/153 (30%), Gaps = 30/153 (19%) Query: 174 PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPAR--VREPGRAEGASR 231 P KP P G G + P A P PGP PP +R A+G Sbjct: 1355 PAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGP---PGPVGPPGLPGLRGDAGAKGEKG 1411 Query: 232 EPRL------------RSRAARPPP--APG-------PGALSRASRSRAAGRPGPGFHGG 270 P L + P P +PG PGA G PGP G Sbjct: 1412 HPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKG 1471 Query: 271 EKAAAPRAPGGGGGRN--PGALGRAAPPSRARQ 301 K A PGG G G G PP Q Sbjct: 1472 AKGAT--GPGGPKGEKGVQGPPGHPGPPGEVIQ 1502 >gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] Length = 1464 Score = 61.2 bits (147), Expect = 2e-09 Identities = 93/357 (26%), Positives = 120/357 (33%), Gaps = 67/357 (18%) Query: 69 NPKRSGDMGKYHAHGH---LRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSA 125 NP G G A+G AP FP A+G +G PP P P ++G + Sbjct: 387 NPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTG 446 Query: 126 GTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPR 185 + G + + P P +EG + A + P L P PP Sbjct: 447 AKGEPGP------------------VGVQGPPGPAGEEGKRGARGEPGPTGL---PGPPG 485 Query: 186 QEGSFGGR--PKSQPPL-PQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAARP 242 + G G R P + P+ A PGP P E GR G + P + Sbjct: 486 ERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGR-PGEAGLPGAKGLTG-S 543 Query: 243 PPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRN-------PGALGRAAP 295 P +PGP G PGP G P PG G R PG G A Sbjct: 544 PGSPGPDG--------KTGPPGPAGQDGR----PGPPGPPGARGQAGVMGFPGPKGAAGE 591 Query: 296 PSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGT 355 P +A + G+ G G AG+ PP +G R G G Sbjct: 592 PGKAGER--GVPGPPGAVGPAGKDGEAGAQGPPGPAGPA-------GERGEQGPAGSPGF 642 Query: 356 HATHGPASPPGR--RHDEEVGAAVLRAGSGEGSR--------RGLQLTPPPRRVHGA 402 GPA PPG + E+ L A G+R RG+Q P P GA Sbjct: 643 QGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGA 699 Score = 58.9 bits (141), Expect = 1e-08 Identities = 68/241 (28%), Positives = 86/241 (35%), Gaps = 32/241 (13%) Query: 181 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPT-----APPARVREPGRAEGASREPRL 235 P P G+ G + PP P A P PG A P R +G EP Sbjct: 316 PGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGP 375 Query: 236 RSRAARPPPAPGPGALSRASRSRAAGRPG----PGFHGGEKAAAPRAPGGGGGRNPGALG 291 A PA PGA + A G PG PGF G + P+ PGG G + Sbjct: 376 PGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGE 435 Query: 292 RAAPPSRARQDAWGLSGCATVGLR-----RGDCDRAGSSQPPATSG----NGERCRFCRR 342 AP S+ A G G VG++ G+ + G+ P +G GE Sbjct: 436 PGAPGSKGDTGAKGEPG--PVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGE------- 486 Query: 343 RRRRGGGGEG-EGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHG 401 R G G G G GP P G R G A + GE R G P + + G Sbjct: 487 --RGGPGSRGFPGADGVAGPKGPAGERGSP--GPAGPKGSPGEAGRPGEAGLPGAKGLTG 542 Query: 402 A 402 + Sbjct: 543 S 543 Score = 57.4 bits (137), Expect = 3e-08 Identities = 67/250 (26%), Positives = 81/250 (32%), Gaps = 40/250 (16%) Query: 194 PKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAP-GP---- 248 PK +P P E AP Q GP P PG A + A PP P GP Sbjct: 285 PKGEPGSPGENGAPG-QMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPP 343 Query: 249 ------GALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQD 302 GA A G GP GE A G NPGA G+ P ++ Sbjct: 344 GFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQ--PGAKGANG 401 Query: 303 AWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPA 362 A G++G RG G PP GN + G GE G GP Sbjct: 402 APGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGE-PGPVGVQGPP 460 Query: 363 SPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRT 422 P +GE +RG + P P + G GG + Sbjct: 461 GP-----------------AGEEGKRGARGEPGPTGLPGPPGERGG--------PGSRGF 495 Query: 423 PRRSGASGPK 432 P G +GPK Sbjct: 496 PGADGVAGPK 505 Score = 50.8 bits (120), Expect = 3e-06 Identities = 66/271 (24%), Positives = 83/271 (30%), Gaps = 79/271 (29%) Query: 181 PTPPR-QEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPAR-----------------VRE 222 P PR EG G R + PP P A PA PG P R Sbjct: 357 PQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARG 416 Query: 223 PGRAEGASREPRLRSRAARPPPAPG-------------------PGALSRASRSRAAGRP 263 P +G P + + P APG PG + A G P Sbjct: 417 PSGPQGPGGPPGPKGNSGEPG-APGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEP 475 Query: 264 GP----------------GFHGGEKAAAPRAPGGGGGRNPGALG-RAAPPSRARQDAWGL 306 GP GF G + A P+ P G G +PG G + +P R GL Sbjct: 476 GPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERG-SPGPAGPKGSPGEAGRPGEAGL 534 Query: 307 SGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPG 366 G + G G + PP +G R GP PPG Sbjct: 535 PGAKGLTGSPGSPGPDGKTGPPGPAGQDGR----------------------PGPPGPPG 572 Query: 367 RRHDEEV-GAAVLRAGSGEGSRRGLQLTPPP 396 R V G + +GE + G + P P Sbjct: 573 ARGQAGVMGFPGPKGAAGEPGKAGERGVPGP 603 Score = 50.1 bits (118), Expect = 5e-06 Identities = 57/205 (27%), Positives = 73/205 (35%), Gaps = 36/205 (17%) Query: 181 PTPPRQEGSFGGR-PKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRA 239 P PP G G + P +P P + P+ GP PP + + G A + Sbjct: 190 PGPPGAPGPQGFQGPPGEPGEPGASGPMGPR-GPPGPPGKNGDDGEA----------GKP 238 Query: 240 ARPPPAPGPGALSRASRSRAAGRPG----PGFHGGEKA------AAPRAPGGGGGRN--P 287 RP PG AG PG GF G + A A P+ G G N P Sbjct: 239 GRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAP 298 Query: 288 GALG-RAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRR 346 G +G R P R R A G +G RG+ G++ PP +G F + Sbjct: 299 GQMGPRGLPGERGRPGAPGPAGA------RGNDGATGAAGPPGPTGPAGPPGFPGAVGAK 352 Query: 347 GGGGE-----GEGTHATHGPASPPG 366 G G EG G PPG Sbjct: 353 GEAGPQGPRGSEGPQGVRGEPGPPG 377 Score = 47.4 bits (111), Expect = 3e-05 Identities = 84/337 (24%), Positives = 103/337 (30%), Gaps = 56/337 (16%) Query: 70 PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPH-----PGDHHPRHRKN-RGP 123 P G++G A G + P A G + GR PP P PG P ++ +GP Sbjct: 850 PGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGP 909 Query: 124 SAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTP 183 T G+ + PP PP E G P P P Sbjct: 910 RGETGPAGRPGEVG----------------PPGPPGPAGEKGSPGA--DGPAGAPGTPGP 951 Query: 184 PRQEGSFG--GRPKSQ-----PPLPQETAAPAPQ-----PGPTAPPARVREPGRAEGASR 231 G G G P + P LP + P Q G PP + PG A Sbjct: 952 QGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGE 1011 Query: 232 EPRLRSRAARPPPA--PGPGALSRASRSRAAGRPG-PGFHGGEKAAAPRAPGGGGGRN-- 286 R + A P PGA + AG PG PG G P G G Sbjct: 1012 SGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGP 1071 Query: 287 ---------PGALGRAAPPS-RARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGER 336 GA G A P R + G G + RG G PP + G Sbjct: 1072 AGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGP 1131 Query: 337 CRFCRRRRRRGGGGEG-----EGTHATHGPASPPGRR 368 RG G +G + GP PPG R Sbjct: 1132 SGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPR 1168 Score = 46.2 bits (108), Expect = 7e-05 Identities = 103/389 (26%), Positives = 130/389 (33%), Gaps = 55/389 (14%) Query: 73 SGDMGKYHAHGHLRAPVFPVAKGSVPSEG----RATPPLPHP-GDHHPRHRKNRGPSAGT 127 +G G A G AP P ++G+ +G R LP P GD R + GP Sbjct: 700 NGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGD-----RGDAGPKGAD 754 Query: 128 SQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQE 187 GK +GL + PP P + G+ P G P Sbjct: 755 GSPGKDG--------VRGLTGPIG--PPGPAGAPGDKGESG----PSGPAG----PTGAR 796 Query: 188 GSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRA--EGASREPRLRSRAARPPPA 245 G+ G R + PP P A P PG P EPG A +G + P A P P Sbjct: 797 GAPGDRGEPGPPGPAGFAGP---PGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPI 853 Query: 246 PGPGALSRASRSRAAGRPGP-GFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAW 304 GA +AG PG GF G P PG G A PP Sbjct: 854 GNVGAPGAKGARGSAGPPGATGFPGAAGRVGP----------PGPSGNAGPP--GPPGPA 901 Query: 305 GLSGCATVGLRRGDCDRAGSSQPPATSG-NGERCRFCRRRRRRGGGGEG-EGTHATHGPA 362 G G G R G PP G GE+ G G +G G Sbjct: 902 GKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVV 961 Query: 363 SPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFG----GGRNLKSNWMS 418 PG+R E G L SGE ++G R G + G G + + Sbjct: 962 GLPGQR--GERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPG 1019 Query: 419 TTRTPRRSGASGPKMVADQTSGISRPPTA 447 +P R G+ G K +T G + PP A Sbjct: 1020 AEGSPGRDGSPGAKGDRGET-GPAGPPGA 1047 Score = 40.0 bits (92), Expect = 0.005 Identities = 63/225 (28%), Positives = 77/225 (34%), Gaps = 61/225 (27%) Query: 201 PQETAAPAPQPGPTAPPARVREPGR----------------AEGASREPRLR----SRAA 240 P+ P GP PP R PG+ G + P+L ++ Sbjct: 113 PKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKST 172 Query: 241 RPPPAPGP-GALSRASRSRAAGRPGP-GFHG-----GEKAAA----PRAPGGGGGRN--- 286 PGP G G PGP GF G GE A+ PR P G G+N Sbjct: 173 GGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDD 232 Query: 287 -----PGALGRAAPPSRARQDAWGLSGCATV-GLR-----------RGDCDRAGSSQPPA 329 PG G PP Q A GL G A + G++ +GD AG P Sbjct: 233 GEAGKPGRPGERGPP--GPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPG 290 Query: 330 TSG-NGERCRFCRR-----RRRRGGGGE--GEGTHATHGPASPPG 366 + G NG + R R R G G G G A PPG Sbjct: 291 SPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPG 335 Score = 33.1 bits (74), Expect = 0.57 Identities = 38/140 (27%), Positives = 45/140 (32%), Gaps = 23/140 (16%) Query: 181 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPG----RAEGASREPRLR 236 P P G G R ++ P P P GP P + G + + + R Sbjct: 1054 PGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGF 1113 Query: 237 SRAARPPPAPG-PGALSRASRSRAAGRPGP-------GFHGGEKAAAPRAPGGGGGRN-- 286 S PP PG PG + S AG GP G G P P G GR Sbjct: 1114 SGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGD 1173 Query: 287 ---------PGALGRAAPPS 297 PG G PPS Sbjct: 1174 AGPVGPPGPPGPPGPPGPPS 1193 >gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] Length = 1626 Score = 60.8 bits (146), Expect = 3e-09 Identities = 97/347 (27%), Positives = 113/347 (32%), Gaps = 82/347 (23%) Query: 74 GDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRK-NRGPSAGTSQLGK 132 G+ G GH AP P A+G + EGR P PG R +K + GP LG Sbjct: 657 GEQGAPGPRGHQGAPGPPGARGPIGPEGRDGP----PGLQGLRGKKGDMGPPGIPGLLG- 711 Query: 133 KTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGG 192 L+ PP PP G G P P + G F G Sbjct: 712 ------------------LQGPPGPPGVPGPPGP-----------GGSPGLPGEIG-FPG 741 Query: 193 RPKSQPPLPQETAAPAPQPGPTAPPARVREPGR--AEGASREPRLRSRAARPPPAPGPGA 250 +P PP P GP PP EPG +G +P LR A PG Sbjct: 742 KP--GPPGPTGPPGKDGPNGPPGPPGTKGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGE 799 Query: 251 LSRASRSRAAGRPG----------------PGFHG--GEKA-AAPRAPGGGGG------- 284 A A G PG PG G GEK A P P G G Sbjct: 800 KGEAGLPGAPGFPGVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTP 859 Query: 285 --RNPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRR 342 R PG G P + D GL G + R G+ G + PP G Sbjct: 860 HPRMPGEQG----PKGEKGDP-GLPGEPGLQGRPGELGPQGPTGPPGAKGQ----EGAHG 910 Query: 343 RRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRG 389 G G GP+ PPG VGA LR G+ RG Sbjct: 911 APGAAGNPGAPGHVGAPGPSGPPG-----SVGAPGLRGTPGKDGERG 952 Score = 59.3 bits (142), Expect = 7e-09 Identities = 91/334 (27%), Positives = 115/334 (34%), Gaps = 48/334 (14%) Query: 70 PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPP-------LPH-PGDHHPRHRKNR 121 P G G+ G P P +G + +G A P LP PG P R + Sbjct: 761 PGPPGTKGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEAGLPGAPG--FPGVRGEK 818 Query: 122 GPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKP 181 G +LG KG E P PP L G ++F P G + Sbjct: 819 GDQGEKGELGLPG--------LKGDRGEKGEAGPAGPPGLP--GTTSLFTPHPRMPGEQG 868 Query: 182 TPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGR--AEGASREPRLRSRA 239 P+ E G P +P L PQ GPT PP + G A GA+ P Sbjct: 869 --PKGEKGDPGLP-GEPGLQGRPGELGPQ-GPTGPPGAKGQEGAHGAPGAAGNPGAPGHV 924 Query: 240 ARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPR--APGGGGGR-NPGALGRAAPP 296 P P+ PG++ G PG GEK AA +PG G R +PGA G PP Sbjct: 925 GAPGPSGPPGSVGAPG---LRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPP 981 Query: 297 SRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGE-GEGT 355 + + GL GS P G C R GG+ +G Sbjct: 982 GKGKDGEPGL---------------RGSPGLPGPLGTKAACGKVRGSENCALGGQCVKGD 1026 Query: 356 HATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRG 389 G PG R D +G A SG +G Sbjct: 1027 RGAPGIPGSPGSRGDPGIGVAGPPGPSGPPGDKG 1060 Score = 55.8 bits (133), Expect = 8e-08 Identities = 86/324 (26%), Positives = 110/324 (33%), Gaps = 78/324 (24%) Query: 91 PVAKGSVPSEGRATPPLPHPG-----DHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKG 145 P KGS S G P P P D P + RGP G L + L K Sbjct: 1056 PGDKGSPGSRG--LPGFPGPQGPAGRDGAPGNPGERGPP-GKPGLSSLLSPGDINLLAKD 1112 Query: 146 LCALLLELPPRPP--PNLQEGGQRAIFQRPPVYLGNKPTP--PRQEGSFGGRPKSQPP-L 200 +C + PP PP P L P + G+K P P +EG+ G + ++ PP L Sbjct: 1113 VCN---DCPPGPPGLPGL------------PGFKGDKGVPGKPGREGTEGKKGEAGPPGL 1157 Query: 201 PQETAAPAPQ-----------------------PGPTAPPARVREPGR--AEGASREPRL 235 P PQ PG PP PG GA+ P + Sbjct: 1158 PGPPGIAGPQGSQGERGADGEVGQKGDQGHPGVPGFMGPPGNPGPPGADGIAGAAGPPGI 1217 Query: 236 RSRAARP-PPAPG-----PGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNP-- 287 + + PP P PG + G+PGP G KA P PG G R P Sbjct: 1218 QGSPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPG-KAGEPGLPGPEGARGPPG 1276 Query: 288 --GALGRA-APPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRR 344 G G + AP R A GL G + + GD G P G Sbjct: 1277 FKGHTGDSGAPGPRGESGAMGLPGQEGLPGKDGDTGPTGPQGPQGPRG------------ 1324 Query: 345 RRGGGGEGEGTHATHGPASPPGRR 368 G G+ GP+ PG++ Sbjct: 1325 -PPGKNGSPGSPGEPGPSGTPGQK 1347 Score = 53.9 bits (128), Expect = 3e-07 Identities = 81/297 (27%), Positives = 99/297 (33%), Gaps = 61/297 (20%) Query: 181 PTPPRQEGSFGGRPK----SQPPLPQETAAPAPQ--PGPTAPPARVREPG----RAEGAS 230 P PP ++GS G R + +P LP E PQ PG PP RV PG R E + Sbjct: 538 PGPPGRDGSKGMRGEPGELGEPGLPGEVGMRGPQGPPGLPGPPGRVGAPGLQGERGEKGT 597 Query: 231 R-------------EPRLRSRAARPPPAPGPGALSRASRSRAAGRPG--------PGFHG 269 R +P + RP P+ G AG PG G G Sbjct: 598 RGEKGERGLDGFPGKPGDTGQQGRPGPSGVAGPQGEKGDVGPAGPPGVPGSVVQQEGLKG 657 Query: 270 GEKAAAPR----APGGGGGRNP-GALGRAAPPS----RARQDAWGLSGCATVGLRRGDCD 320 + A PR APG G R P G GR PP R ++ G G + +G Sbjct: 658 EQGAPGPRGHQGAPGPPGARGPIGPEGRDGPPGLQGLRGKKGDMGPPGIPGLLGLQGPPG 717 Query: 321 RAGSSQPPATSGNGERCRFCRRRRRRGGGGEGE----GTHATHGPASPPGRRHDEEVGAA 376 G PP G+ G GE G GP PPG+ D G Sbjct: 718 PPGVPGPPGPGGS--------------PGLPGEIGFPGKPGPPGPTGPPGK--DGPNGPP 761 Query: 377 VLRAGSGEGSRRGLQLTPPPRRVHGALQRFG-GGRNLKSNWMSTTRTPRRSGASGPK 432 GE RG P + G + G GR + P G G K Sbjct: 762 GPPGTKGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEAGLPGAPGFPGVRGEK 818 Score = 42.0 bits (97), Expect = 0.001 Identities = 89/360 (24%), Positives = 115/360 (31%), Gaps = 101/360 (28%) Query: 73 SGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNR----------G 122 +GD G G A P +G +P + T P G PR + G Sbjct: 1281 TGDSGAPGPRGESGAMGLPGQEG-LPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPG 1339 Query: 123 PSAGTSQLGKKTQCRSL----FLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRP--PVY 176 PS Q G K + S FL +G PP P G+ + +P P + Sbjct: 1340 PSGTPGQKGSKGENGSPGLPGFLGPRG--------PPGEPGEKGVPGKEGVPGKPGEPGF 1391 Query: 177 LGNKPTP--PRQEGSFGGRPK-SQPPLPQE---TAAPAPQP-----GPTAPPARVREPG- 224 G + P +G GG+ + P +P T PQ GP PP +PG Sbjct: 1392 KGERGDPGIKGDKGPPGGKGQPGDPGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQPGF 1451 Query: 225 ---RAEGASREPR---------------------------LRSRAARPPPAPGPGALSRA 254 R E S E ++S RP P PG Sbjct: 1452 PGLRGESPSMETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLP 1511 Query: 255 SRSRAAGRPG-PGFHGGEKAAAPRAPGG--GGGRNPGALGRAAPPSRARQDAWGLSGCAT 311 R+ G PG PG G E + P P G G +PGA G Sbjct: 1512 GRAGPMGEPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPG-------------------- 1551 Query: 312 VGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATH----GPASPPGR 367 VGLR G PP G + + G +GE A H GP PPG+ Sbjct: 1552 VGLR-------GEMGPPGIPGQPGEPGYAKDGLPGIPGPQGETGPAGHPGLPGPPGPPGQ 1604 Score = 38.1 bits (87), Expect = 0.018 Identities = 97/387 (25%), Positives = 114/387 (29%), Gaps = 72/387 (18%) Query: 70 PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPP-LPHPGD---HHPRHRKNRGPSA 125 P G+ G G L P +G G A PP LP HPR +GP Sbjct: 812 PGVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPRMPGEQGPKG 871 Query: 126 GTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEG-GQRAIFQRP--------PVY 176 G + GL EL P+ P GQ P P + Sbjct: 872 EKGDPGLPGE--------PGLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGH 923 Query: 177 LGNKPTPPRQEGSFG-----GRPKSQPPLPQETAAPAP-QPGPTAPPARVREPGR----A 226 +G P P GS G G P ++ AA PGP P PG Sbjct: 924 VG-APGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPRGDPGAPGLPGPPG 982 Query: 227 EGASREPRLRSRAARPPPAPGPGALSRASRSR--------------AAGRPG-PGFHG-- 269 +G EP LR P P A + S A G PG PG G Sbjct: 983 KGKDGEPGLRGSPGLPGPLGTKAACGKVRGSENCALGGQCVKGDRGAPGIPGSPGSRGDP 1042 Query: 270 GEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQ--- 326 G A P P G G R P Q G G RG + G S Sbjct: 1043 GIGVAGPPGPSGPPGDKGSPGSRGLPGFPGPQGPAGRDGAPGNPGERGPPGKPGLSSLLS 1102 Query: 327 ---------------PPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDE 371 PP G F + G G EGT G A PPG Sbjct: 1103 PGDINLLAKDVCNDCPPGPPGLPGLPGFKGDKGVPGKPGR-EGTEGKKGEAGPPGLPGPP 1161 Query: 372 EV----GAAVLRAGSGEGSRRGLQLTP 394 + G+ R GE ++G Q P Sbjct: 1162 GIAGPQGSQGERGADGEVGQKGDQGHP 1188 Score = 33.5 bits (75), Expect = 0.44 Identities = 66/260 (25%), Positives = 79/260 (30%), Gaps = 66/260 (25%) Query: 163 EGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARV-- 220 E G+R + P KP Q+G G + P + PA GP P V Sbjct: 600 EKGERGLDGFP-----GKPGDTGQQGRPGPSGVAGPQGEKGDVGPA---GPPGVPGSVVQ 651 Query: 221 REPGRAEGASREPRLRSRAARPPPAPG----------------------------PGALS 252 +E + E + PR A PP A G PG L Sbjct: 652 QEGLKGEQGAPGPRGHQGAPGPPGARGPIGPEGRDGPPGLQGLRGKKGDMGPPGIPGLLG 711 Query: 253 RASRSRAAGRPGP-------------GFHGGEKAAAPRAPGGGGGRN--PGALGRAAPPS 297 G PGP GF G P P G G N PG G P Sbjct: 712 LQGPPGPPGVPGPPGPGGSPGLPGEIGFPGKPGPPGPTGPPGKDGPNGPPGPPGTKGEPG 771 Query: 298 RARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGE-GE--- 353 +D GL G + G+ AG +G F R +G GE GE Sbjct: 772 ERGED--GLPGKPGLRGEIGEQGLAGRPGEKGEAGLPGAPGFPGVRGEKGDQGEKGELGL 829 Query: 354 -------GTHATHGPASPPG 366 G GPA PPG Sbjct: 830 PGLKGDRGEKGEAGPAGPPG 849 >gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] Length = 1466 Score = 60.5 bits (145), Expect = 3e-09 Identities = 92/331 (27%), Positives = 106/331 (32%), Gaps = 40/331 (12%) Query: 154 PPRPPPNLQEGGQRAIFQRP-PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAP--- 209 P PP GG + P P L P G G+P P A AP Sbjct: 616 PQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGE-NGKPGEPGPKGDAGAPGAPGGK 674 Query: 210 ----QPGPTAPPARVREPGRAEGASRE-PRLRSRAARPPPAPG----PGALSRASRSRAA 260 PG PP PG GA P AA PP PG PG Sbjct: 675 GDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGL 734 Query: 261 GRPGPGFHGGEKA--AAPRAPGGGGGRNPGALGRAAPPSRARQDA----WGLSGCATVGL 314 G PGP GE A PG G R P G PP A Q G G + Sbjct: 735 GSPGPKGDKGEPGGPGADGVPGKDGPRGP--TGPIGPPGPAGQPGDKGEGGAPGLPGIAG 792 Query: 315 RRGDCDRAGSSQPPATSG-----------NGERCRFCRRRRRRGGGGEGEGTHATHGPAS 363 RG G + PP +G G+ R + GG G GPA Sbjct: 793 PRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAG 852 Query: 364 PPGRRHDE-EVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGG-GRNLKSNWMSTTR 421 PPG + + E G+ +G RGL P G G G++ T Sbjct: 853 PPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTG 912 Query: 422 TPRRSGASGPKMVADQ-----TSGISRPPTA 447 P G SGPK A Q + G PP A Sbjct: 913 APGSPGVSGPKGDAGQPGEKGSPGAQGPPGA 943 Score = 57.0 bits (136), Expect = 4e-08 Identities = 88/324 (27%), Positives = 103/324 (31%), Gaps = 65/324 (20%) Query: 155 PRPPPNLQEGGQRAIFQRPPVYLGNKPTPPR--QEGSFGGRPKSQPPLPQETAAPAPQPG 212 P PP GQ + P GN P + + G GG PP P PG Sbjct: 563 PGPPGPSGPRGQPGVMGFPGPK-GNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPG 621 Query: 213 PTAPPARVREPG--------RAEGASREPRLRSRAARPPP-----APG-PGALSRASRSR 258 PT P + G G P + P P APG PG A Sbjct: 622 PTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPG 681 Query: 259 AAGRPG----PGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGL 314 G PG PG GG A P P GG GA G PP A T GL Sbjct: 682 ERGPPGLAGAPGLRGG---AGPPGPEGG----KGAAGPPGPPGAA----------GTPGL 724 Query: 315 RRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEG----EGTHATHGPASPP---GR 367 + +R G P GE G G +G +G GP PP G+ Sbjct: 725 QGMPGERGGLGSPGPKGDKGE---------PGGPGADGVPGKDGPRGPTGPIGPPGPAGQ 775 Query: 368 RHDEEVGAAV----LRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTP 423 D+ G A + G RG P P GA G+N + P Sbjct: 776 PGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGA-----PGQNGEPGGKGERGAP 830 Query: 424 RRSGASGPKMVADQT--SGISRPP 445 G GP VA SG + PP Sbjct: 831 GEKGEGGPPGVAGPPGGSGPAGPP 854 Score = 56.6 bits (135), Expect = 5e-08 Identities = 80/280 (28%), Positives = 94/280 (33%), Gaps = 29/280 (10%) Query: 173 PPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASRE 232 PP GN P PP GS G K PP P PG + P +PG Sbjct: 883 PPGSNGN-PGPPGPSGSPG---KDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKG----- 933 Query: 233 PRLRSRAARPPPAPGPGALSRASRSRAAGRPG-PGFHGGEKAAAPRAPGGGGGRNPGALG 291 S A+ PP PG L A + A G G PG G + P+ G G+ PGA G Sbjct: 934 ----SPGAQGPPG-APGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGK-PGANG 987 Query: 292 RAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGE 351 + R GL G A G GS P G+ + R G Sbjct: 988 LSG--ERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGS-PGGKGDRGENGSPGAPG 1044 Query: 352 GEGTHATHGPASPPGRRHDE-EVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFG--G 408 G GP P G+ D E G A G RG P P+ G G G Sbjct: 1045 APGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRG---APGPQGPRGDKGETGERG 1101 Query: 409 GRNLKSNWMSTTRTPRRSGASGPKMVADQTSGISRPPTAG 448 +K + P GA G A Q I P AG Sbjct: 1102 AAGIKGH----RGFPGNPGAPGSPGPAGQQGAIGSPGPAG 1137 Score = 50.1 bits (118), Expect = 5e-06 Identities = 57/217 (26%), Positives = 70/217 (32%), Gaps = 28/217 (12%) Query: 195 KSQPPLPQETAAPAPQPGPTAPPARVREPGR--AEGASREPRLRSRAARPPPAPGPGALS 252 K + LP E AP P GP P PG A GA R +P P PG Sbjct: 284 KGENGLPGENGAPGPM-GPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAG 342 Query: 253 RASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPP-------SRARQDAWG 305 A G GP G A + G + GA G PP + G Sbjct: 343 FPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAG 402 Query: 306 LSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPP 365 + G + RG AG++ P RGG GE G + G P Sbjct: 403 IPGAPGLMGARGPPGPAGANGAPGL---------------RGGAGE-PGKNGAKGEPGPR 446 Query: 366 GRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGA 402 G R E G + GE + G P + GA Sbjct: 447 GER--GEAGIPGVPGAKGEDGKDGSPGEPGANGLPGA 481 Score = 47.4 bits (111), Expect = 3e-05 Identities = 82/316 (25%), Positives = 100/316 (31%), Gaps = 62/316 (19%) Query: 157 PPPNLQEGGQRAIFQRPPVYLGNKPT-PPRQEGSFGGRPKSQPP-LPQETAAPAPQPGPT 214 P P + G A+ +PP PT PP +G G + PP +P P PG Sbjct: 75 PNPEIPFGECCAVCPQPPT----APTRPPNGQGPQGPKGDPGPPGIPGRNGDPGI-PGQP 129 Query: 215 APPARVREPGRAEGASREPRLRSR----------------AARPPPAPGPGALSRASRSR 258 P PG E P+ S A P PA PG S Sbjct: 130 GSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGPPGTSG 189 Query: 259 AAGRPG-PGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRRG 317 G PG PG+ G P G G PGA+G + P + G SG R G Sbjct: 190 HPGSPGSPGYQGPPGEPGQAGPSGPPGP-PGAIGPSGPAGKD-----GESG------RPG 237 Query: 318 DCDRAGSSQPPATSGNGERCRFCRRRRRRG----GGGEGE----------------GTHA 357 G PP G F + RG G +GE G Sbjct: 238 RPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPG 297 Query: 358 THGPASPPGRRHDEEV-GAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNW 416 GP PG R + GAA R G G P P G F G K Sbjct: 298 PMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAG----FPGSPGAKGE- 352 Query: 417 MSTTRTPRRSGASGPK 432 + +P +GA G + Sbjct: 353 VGPAGSPGSNGAPGQR 368 Score = 46.6 bits (109), Expect = 5e-05 Identities = 79/301 (26%), Positives = 99/301 (32%), Gaps = 47/301 (15%) Query: 91 PVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALL 150 P G S G+ PP P P GP Q G+K + Sbjct: 890 PGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGA------------ 937 Query: 151 LELPPRPPPNLQEGGQRAI--FQRPPVYLGNKPTP-PRQEGSFGGRPKSQ-------PPL 200 + PP P L G PP G + +P P+ G+P + PP Sbjct: 938 -QGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPG 996 Query: 201 PQET---AAPAPQPGPTAPPARVREPGR-AEGASREPRLRSRAARPPPAPG----PGALS 252 PQ A A +PG P PGR + R + + P APG PG + Sbjct: 997 PQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVG 1056 Query: 253 RASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGCATV 312 A +S G GP G APG G R GA G P R + G G A + Sbjct: 1057 PAGKSGDRGESGPAGPAG-------APGPAGSR--GAPGPQGP--RGDKGETGERGAAGI 1105 Query: 313 GLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEG-----EGTHATHGPASPPGR 367 RG G+ P +G RG G +GT GP PPG Sbjct: 1106 KGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGP 1165 Query: 368 R 368 R Sbjct: 1166 R 1166 Score = 46.2 bits (108), Expect = 7e-05 Identities = 72/254 (28%), Positives = 84/254 (33%), Gaps = 37/254 (14%) Query: 181 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAA 240 P PP GS GG+ + PA PG PG A GA+ P LR A Sbjct: 383 PGPPGINGSPGGKGEM---------GPAGIPGAPGLMGARGPPGPA-GANGAPGLRGGAG 432 Query: 241 RPPPAPGPGALSRASRSRAAGRPG-PGFHGGE-KAAAPRAPGGGGGRNPGALG-RAAPPS 297 P G AG PG PG G + K +P PG G PGA G R AP Sbjct: 433 EPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANG--LPGAAGERGAPGF 490 Query: 298 RARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHA 357 R G+ G +G G+ P G R G G G Sbjct: 491 RGPAGPNGIPG------EKGPAGERGAPGPAGPRG-------AAGEPGRDGVPGGPGMRG 537 Query: 358 THGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWM 417 P SP G D + G GE R G PR G + G K N Sbjct: 538 M--PGSPGGPGSDGKPGPP---GSQGESGRPGPPGPSGPRGQPGVM----GFPGPKGNDG 588 Query: 418 STTRTPRRSGASGP 431 + + R G GP Sbjct: 589 APGKNGERGGPGGP 602 Score = 43.5 bits (101), Expect = 4e-04 Identities = 60/211 (28%), Positives = 67/211 (31%), Gaps = 58/211 (27%) Query: 181 PTPPRQEGSFGGRPKSQPPLPQETAAPAPQ---PGPTAPPARVREPGRAEGASREPRLRS 237 P P G G R +S P P PA PGP P E G A ++ Sbjct: 1052 PGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAG----IKG 1107 Query: 238 RAARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPS 297 P PG+ A + A G PGP A PR P G G PP Sbjct: 1108 HRGFPGNPGAPGSPGPAGQQGAIGSPGP--------AGPRGPVGPSG----------PPG 1149 Query: 298 RARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGN-GERCRFCRRRRRRGGGGEGEGTH 356 + G SG G PP GN GER G EG H Sbjct: 1150 KD-----GTSG------------HPGPIGPPGPRGNRGER------------GSEGSPGH 1180 Query: 357 -ATHGPASPPGRRHD--EEVGAAVLRAGSGE 384 GP PPG VGAA + GE Sbjct: 1181 PGQPGPPGPPGAPGPCCGGVGAAAIAGIGGE 1211 >gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] Length = 2944 Score = 60.1 bits (144), Expect = 4e-09 Identities = 79/279 (28%), Positives = 92/279 (32%), Gaps = 56/279 (20%) Query: 146 LCALLLELPPRPPPNLQEGGQRAIFQRPPVYL--GNKPTPPRQ--EGSFGGRPKSQPPLP 201 LC PRP P PVY G K P G G P P LP Sbjct: 1233 LCQASFTTQPRPEPC-------------PVYCPKGQKGEPGEMGLRGQVG--PPGDPGLP 1277 Query: 202 QETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAPGPGALSRASRSRAAG 261 T A PGP PP A+G P R P A PG + G Sbjct: 1278 GRTGA----PGPQGPPG----SATAKGERGFPGADGRPGSPGRAGNPGTPGAPGLKGSPG 1329 Query: 262 RPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCDR 321 PGP GE+ PR P G G +G P R+ G SG GD Sbjct: 1330 LPGPRGDPGER--GPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGPLGDPGP 1387 Query: 322 AGSSQPPATSGNGERCRFCRRRRRRGGGGEGE--------------GTHATHGPASPPGR 367 G P T+ G++ R RG G GE G+ GP PPG+ Sbjct: 1388 RGPPGLPGTAMKGDK----GDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQGPVGPPGK 1443 Query: 368 ---RHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGAL 403 + D E GA L G +G PR GA+ Sbjct: 1444 KGEKGDSEDGAPGLPGQPGSPGEQG------PRGPPGAI 1476 Score = 53.9 bits (128), Expect = 3e-07 Identities = 89/372 (23%), Positives = 117/372 (31%), Gaps = 89/372 (23%) Query: 91 PVAKGSVPSEGRATPPLPHPGDHHPRHRKNR----------GPSAGTSQLGKKTQCRSLF 140 P +G + GRA PP GD P K GP ++G+K Sbjct: 1591 PGDRGPIGLTGRAGPP----GDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGD----- 1641 Query: 141 LRTKGLCALLLELPPRPPPNLQEGGQRAIFQRP----PVYLGNKPTPPRQEGSFGGRPKS 196 E PP P + G+R + P PV P ++G G S Sbjct: 1642 -----------EGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSS 1690 Query: 197 QPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAA---------------- 240 P +PGP PP R+ + G EP R + Sbjct: 1691 GPK------GDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPGE 1744 Query: 241 ------RPPPAP--GPGALSRASRSRAAGRPG----PGFHGGEKAAAPRAPGGGGGR--N 286 R PP P PG A G PG G G AA P P G G+ + Sbjct: 1745 RGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGD 1804 Query: 287 PGALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGN-GERCRFCRRRRR 345 PG G P R Q G SG + + G+ + G + G+ GE R + Sbjct: 1805 PGRDG--LPGLRGEQGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDS 1862 Query: 346 RGGGGEG----------------EGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRG 389 G EG +G GP PPG+ G + GE +G Sbjct: 1863 GASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGSKG 1922 Query: 390 LQLTPPPRRVHG 401 Q P R + G Sbjct: 1923 EQGLPGERGLRG 1934 Score = 49.7 bits (117), Expect = 6e-06 Identities = 83/316 (26%), Positives = 107/316 (33%), Gaps = 64/316 (20%) Query: 69 NPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHH----------PRHR 118 +P R+G+ G A G +P P +G P E P PG P + Sbjct: 1309 SPGRAGNPGTPGAPGLKGSPGLPGPRGD-PGERGPRGPKGEPGAPGQVIGGEGPGLPGRK 1367 Query: 119 KNRGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNL----QEGGQRAIFQRPP 174 + GPS G L + PR PP L +G + +R P Sbjct: 1368 GDPGPSGPPGPRGP-----------------LGDPGPRGPPGLPGTAMKGDKGDRGERGP 1410 Query: 175 VYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAE-GASREP 233 P P GG +P LP +P PQ GP PP + E G +E GA P Sbjct: 1411 ------PGPGE-----GGIAPGEPGLPGLPGSPGPQ-GPVGPPGKKGEKGDSEDGAPGLP 1458 Query: 234 RLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKA-AAPRAPGGGGGRNPGALGR 292 P PGA+ G PGP GEK P P G G PG GR Sbjct: 1459 GQPGSPGEQGPRGPPGAIGPKG---DRGFPGPLGEAGEKGERGPPGPAGSRGL-PGVAGR 1514 Query: 293 AAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEG 352 P ++ + G +G R+G+ G PA G + +G G Sbjct: 1515 --PGAKGPEGPPGPTG------RQGEKGEPGRPGDPAVVGPA----VAGPKGEKGDVGPA 1562 Query: 353 --EGTHATHGPASPPG 366 G G PPG Sbjct: 1563 GPRGATGVQGERGPPG 1578 Score = 48.1 bits (113), Expect = 2e-05 Identities = 86/329 (26%), Positives = 104/329 (31%), Gaps = 69/329 (20%) Query: 155 PRPPPNLQEGGQRAIFQRPPVYLGNK--PTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG 212 P P LQ G R PP +G P PP G G P PQ + +PG Sbjct: 2163 PEGKPGLQ--GPRG----PPGPVGGHGDPGPPGAPGLAG------PAGPQGPSGLKGEPG 2210 Query: 213 PTAPPAR-VREPGRAEGASREPRLRSRAARPPPAPG-PGALSRASRSRAAGRPG------ 264 T PP R + P A G P S P +PG PG + + A GR G Sbjct: 2211 ETGPPGRGLTGPTGAVGLPGPPG-PSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDG 2269 Query: 265 ----PGFHGGEKAAAPRAPGGGGGRN----------PGALGRAAPPSRARQDAWGLSGC- 309 PG G P P G G PGA G P D G G Sbjct: 2270 DRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAK 2329 Query: 310 ATVGL-----RRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASP 364 GL +G+ RAG P G + G G G + GP P Sbjct: 2330 GDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGA-----PGPKGFKGDPGVGVPGSPGPPGP 2384 Query: 365 PGRRHDEEV----GAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTT 420 PG + D + GA + G+ RG P P G R L Sbjct: 2385 PGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGP----------SGERGLAG------ 2428 Query: 421 RTPRRSGASGPKMVADQTSGISRPPTAGI 449 P R G GP + P +G+ Sbjct: 2429 -PPGREGIPGPLGPPGPPGSVGPPGASGL 2456 Score = 45.8 bits (107), Expect = 9e-05 Identities = 56/214 (26%), Positives = 66/214 (30%), Gaps = 34/214 (15%) Query: 183 PPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARV--------------------RE 222 PP ++G G P LP + +P Q GP PP + R Sbjct: 1440 PPGKKGEKGDSEDGAPGLPGQPGSPGEQ-GPRGPPGAIGPKGDRGFPGPLGEAGEKGERG 1498 Query: 223 PGRAEGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPR----- 277 P G+ P + R P PG R GRPG G A P+ Sbjct: 1499 PPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGD 1558 Query: 278 -APGGGGGRNPGALGRAAPPSRARQDAWGLSG----CATVGLRRGDCDRAGSSQPPATSG 332 P G G G G PP G G +GL G G S PP G Sbjct: 1559 VGPAGPRGAT-GVQGERGPPGLVLPGDPGPKGDPGDRGPIGL-TGRAGPPGDSGPPGEKG 1616 Query: 333 NGERCRFCRRRRRRGGGGEGEGTHATHGPASPPG 366 + R RG GE G GP PG Sbjct: 1617 DPGRPGPPGPVGPRGRDGE-VGEKGDEGPPGDPG 1649 Score = 45.8 bits (107), Expect = 9e-05 Identities = 64/213 (30%), Positives = 73/213 (34%), Gaps = 34/213 (15%) Query: 181 PTPPRQEGSFGGRPKSQPP-------LPQETAAPAPQ--PGPTAPPARVREPGRAEGASR 231 P P R+ G G + PP P E + PGP PP G A G R Sbjct: 1972 PVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPP------GLALG-ER 2024 Query: 232 EPRLRSRAARPPPAPG-PGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGAL 290 P S A P PG PG RA AGRPG GEK G PG Sbjct: 2025 GPPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTP 2084 Query: 291 GRAAPPS---RARQDAWGLSG-CATVGLR--RGDCDRAGSSQPPATSG----NGERCRFC 340 G PP + GLSG GL+ +G+ G P G G+R Sbjct: 2085 GPPGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPG 2144 Query: 341 RRRRRRGGGGEG-------EGTHATHGPASPPG 366 R + G G EG GP PPG Sbjct: 2145 PRGQDGNPGLPGERGMAGPEGKPGLQGPRGPPG 2177 Score = 39.7 bits (91), Expect = 0.006 Identities = 55/211 (26%), Positives = 64/211 (30%), Gaps = 33/211 (15%) Query: 186 QEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRA-EGASREPRLRSRAARPPP 244 ++G G + + PP T P PGP P V EPG G P L+ P Sbjct: 2065 EKGERGEQGRDGPPGLPGTPGP---PGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPG- 2120 Query: 245 APGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAW 304 S + R PG G PR G G PG G A P + Sbjct: 2121 -------SNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGL-PGERGMAGPEGKP----- 2167 Query: 305 GLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEG-EGTHATHGPAS 363 GL G G G PP G G +G G G Sbjct: 2168 GLQGPRG---PPGPVGGHGDPGPPGAPG-----------LAGPAGPQGPSGLKGEPGETG 2213 Query: 364 PPGRRHDEEVGAAVLRAGSGEGSRRGLQLTP 394 PPGR GA L G G Q +P Sbjct: 2214 PPGRGLTGPTGAVGLPGPPGPSGLVGPQGSP 2244 Score = 32.3 bits (72), Expect = 0.98 Identities = 42/148 (28%), Positives = 50/148 (33%), Gaps = 37/148 (25%) Query: 212 GPTAPPARVREPGRA--EGASREPRLRSRAARPPPAPGPGALSRASRSRAA-GRPGPGFH 268 G PP R PG A +G EP + ++ APG L R G+PGP Sbjct: 2644 GEAGPPGR---PGLAGHKGEMGEPGVPGQSG----APGKEGLIGPKGDRGFDGQPGPKGD 2696 Query: 269 GGEK--------------------AAAPRAPGGGGGRNP----GALGRAAPPSRARQDAW 304 GEK A P PG G R P G G PP A Sbjct: 2697 QGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAP 2756 Query: 305 GLSGCATVGLRRGDCDRAGSSQPPATSG 332 G+ G RG+ R G + P G Sbjct: 2757 GVPGAPG---ERGEQGRPGPAGPRGEKG 2781 >gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens] Length = 1073 Score = 59.3 bits (142), Expect = 7e-09 Identities = 64/220 (29%), Positives = 83/220 (37%), Gaps = 28/220 (12%) Query: 152 ELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQP 211 E P PP L G ++F P G + P+ E G P +P L PQ Sbjct: 323 EAGPAGPPGLP--GTTSLFTPHPRMPGEQG--PKGEKGDPGLP-GEPGLQGRPGELGPQ- 376 Query: 212 GPTAPPARVREPGR--AEGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHG 269 GPT PP + G A GA+ P P P+ PG++ G PG Sbjct: 377 GPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPSGPPGSVGAPG---LRGTPGKDGER 433 Query: 270 GEKAAAPR--APGGGGGR-NPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQ 326 GEK AA +PG G R +PGA G PP + + GL G + G G+ Sbjct: 434 GEKGAAGEEGSPGPVGPRGDPGAPGLPGPPGKGKDGEPGLRGSPGLPGPLGTKGDRGAPG 493 Query: 327 PPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPG 366 P + G+ G G G GP+ PPG Sbjct: 494 IPGSPGS--------------RGDPGIGVAGPPGPSGPPG 519 Score = 58.9 bits (141), Expect = 1e-08 Identities = 92/350 (26%), Positives = 120/350 (34%), Gaps = 81/350 (23%) Query: 69 NPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPH--PGDHH-------PRHRK 119 +P G +G G P P ++G P G A PP P PGD P Sbjct: 476 SPGLPGPLGTKGDRGAPGIPGSPGSRGD-PGIGVAGPPGPSGPPGDKGSPGSRGLPGFPG 534 Query: 120 NRGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPP--PNLQEGGQRAIFQRPPVYL 177 +GP AG L + L K +C + PP PP P L P + Sbjct: 535 PQGP-AGRDGLSSLLSPGDINLLAKDVCN---DCPPGPPGLPGL------------PGFK 578 Query: 178 GNKPTP--PRQEGSFGGRPKSQPP-LPQETAAPAPQ-----------------------P 211 G+K P P +EG+ G + ++ PP LP PQ P Sbjct: 579 GDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGEVGQKGDQGHPGVP 638 Query: 212 GPTAPPARVREPGR--AEGASREPRLRSRAARP-PPAPG-----PGALSRASRSRAAGRP 263 G PP PG GA+ P ++ + PP P PG + G+P Sbjct: 639 GFMGPPGNPGPPGADGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKP 698 Query: 264 GPGFHGGEKAAAPRAPGGGGGRNP----GALGRA-APPSRARQDAWGLSGCATVGLRRGD 318 GP G KA P PG G R P G G + AP R A GL G + + GD Sbjct: 699 GPPGEPG-KAGEPGLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEGLPGKDGD 757 Query: 319 CDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRR 368 G P G G G+ GP+ PG++ Sbjct: 758 TGPTGPQGPQGPRG-------------PPGKNGSPGSPGEPGPSGTPGQK 794 Score = 47.8 bits (112), Expect = 2e-05 Identities = 97/374 (25%), Positives = 124/374 (33%), Gaps = 67/374 (17%) Query: 72 RSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLG 131 R G+ G+ G AP FP +G +G L PG R K AG L Sbjct: 278 RPGEKGEAGLPG---APGFPGVRGEKGDQGEKGE-LGLPGLKGDRGEKGEAGPAGPPGLP 333 Query: 132 KKTQCRSLFLRTKGLCALLLELPPRPPPNLQEG-----GQRAIFQRPPVYLGNKPTPPR- 185 T SLF +P P ++G G+ + RP PT P Sbjct: 334 GTT---SLFTPHP-------RMPGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPG 383 Query: 186 ---QEGSFGGRPKS-QPPLPQETAAPAPQ--PGPTAPPARVREPGR-----AEGASRE-- 232 QEG+ G + P P AP P PG P PG+ +GA+ E Sbjct: 384 AKGQEGAHGAPGAAGNPGAPGHVGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEEG 443 Query: 233 ------PRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRN 286 PR A P PG G + G PGP G++ A P PG G R Sbjct: 444 SPGPVGPRGDPGAPGLPGPPGKGKDGEPGLRGSPGLPGPLGTKGDRGA-PGIPGSPGSRG 502 Query: 287 PGALGRAAPPSRA----RQDAWGLSGCATVGLRRGDCDRAGSSQ---------------- 326 +G A PP + + + G G +G R G S Sbjct: 503 DPGIGVAGPPGPSGPPGDKGSPGSRGLPGFPGPQGPAGRDGLSSLLSPGDINLLAKDVCN 562 Query: 327 --PPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEV----GAAVLRA 380 PP G F + G G EGT G A PPG + G+ R Sbjct: 563 DCPPGPPGLPGLPGFKGDKGVPGKPGR-EGTEGKKGEAGPPGLPGPPGIAGPQGSQGERG 621 Query: 381 GSGEGSRRGLQLTP 394 GE ++G Q P Sbjct: 622 ADGEVGQKGDQGHP 635 Score = 42.0 bits (97), Expect = 0.001 Identities = 89/360 (24%), Positives = 115/360 (31%), Gaps = 101/360 (28%) Query: 73 SGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNR----------G 122 +GD G G A P +G +P + T P G PR + G Sbjct: 728 TGDSGAPGPRGESGAMGLPGQEG-LPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPG 786 Query: 123 PSAGTSQLGKKTQCRSL----FLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRP--PVY 176 PS Q G K + S FL +G PP P G+ + +P P + Sbjct: 787 PSGTPGQKGSKGENGSPGLPGFLGPRG--------PPGEPGEKGVPGKEGVPGKPGEPGF 838 Query: 177 LGNKPTP--PRQEGSFGGRPK-SQPPLPQE---TAAPAPQP-----GPTAPPARVREPG- 224 G + P +G GG+ + P +P T PQ GP PP +PG Sbjct: 839 KGERGDPGIKGDKGPPGGKGQPGDPGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQPGF 898 Query: 225 ---RAEGASREPR---------------------------LRSRAARPPPAPGPGALSRA 254 R E S E ++S RP P PG Sbjct: 899 PGLRGESPSMETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLP 958 Query: 255 SRSRAAGRPG-PGFHGGEKAAAPRAPGG--GGGRNPGALGRAAPPSRARQDAWGLSGCAT 311 R+ G PG PG G E + P P G G +PGA G Sbjct: 959 GRAGPMGEPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPG-------------------- 998 Query: 312 VGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATH----GPASPPGR 367 VGLR G PP G + + G +GE A H GP PPG+ Sbjct: 999 VGLR-------GEMGPPGIPGQPGEPGYAKDGLPGIPGPQGETGPAGHPGLPGPPGPPGQ 1051 Score = 32.0 bits (71), Expect = 1.3 Identities = 79/313 (25%), Positives = 98/313 (31%), Gaps = 70/313 (22%) Query: 153 LPPRPPP--NLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQ 210 L PR P N+ +G Q A + L + P Q +P+ T Sbjct: 171 LGPRTDPWENVDQGAQGACGRGNTSVLPSSVAP-------------QCSMPKGTGHEFSA 217 Query: 211 PGPTAPPARVREPGRAE---GASREPRLRSRAARPPPA-----PG-PGALSRASRSRAAG 261 T PA R RA A P L+ P PG PG AG Sbjct: 218 ALGTQGPADQRADARASCILAAKTAPGLKQLNGEPGERGEDGLPGKPGLRGEIGEQGLAG 277 Query: 262 RPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCDR 321 RPG GE A P APG G R + Q G G + RG+ Sbjct: 278 RPG---EKGE-AGLPGAPGFPGVRG----------EKGDQGEKGELGLPGLKGDRGEKGE 323 Query: 322 AGSSQPPATSGNGERCRFCRRRRRRGGGG-EGE----------------GTHATHGPASP 364 AG + PP G F R G G +GE G GP P Sbjct: 324 AGPAGPPGLPGTTSL--FTPHPRMPGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGP 381 Query: 365 PGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPR 424 PG + E GA +G G P P G++ G L+ TP Sbjct: 382 PGAKGQE--GAHGAPGAAGNPGAPGHVGAPGPSGPPGSV----GAPGLRG-------TPG 428 Query: 425 RSGASGPKMVADQ 437 + G G K A + Sbjct: 429 KDGERGEKGAAGE 441 >gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] Length = 416 Score = 58.9 bits (141), Expect = 1e-08 Identities = 65/243 (26%), Positives = 89/243 (36%), Gaps = 45/243 (18%) Query: 154 PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG- 212 P PPP +G + + PP KP P +G G +P+ PP P + P PQ G Sbjct: 98 PQGPPP---QGDKSRSPRSPP----GKPQGPPPQG--GNQPQGPPPPPGKPQGPPPQGGN 148 Query: 213 -PTAPPARVREPGRAEGASREPRLRSRAARPPPA-----PGPGALSRASRSRAAGRP-GP 265 P PP PG+ +G + +SR++R PP P G G+P GP Sbjct: 149 KPQGPPP----PGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 204 Query: 266 GFHGGEKAAAPRAPGGGGG------------RNPGALGRAAPPSRARQDAWGLSGCATVG 313 GG K P PG G R+P + PP Q G Sbjct: 205 PPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQ---GPPPPPG 261 Query: 314 LRRGDCDRAGSS-QPPATSG--------NGERCRFCRRRRRRGGGGEGEGTHATHGPASP 364 +G + G+ Q P G G + R R + G +G + GP P Sbjct: 262 KPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPP 321 Query: 365 PGR 367 PG+ Sbjct: 322 PGK 324 Score = 58.5 bits (140), Expect = 1e-08 Identities = 47/150 (31%), Positives = 64/150 (42%), Gaps = 18/150 (12%) Query: 154 PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG- 212 P PPP +GG ++ R P KP P +G G +P+ PP P + P PQ G Sbjct: 283 PQGPPP---QGGSKSRSSRSP---PGKPQGPPPQG--GNQPQGPPPPPGKPQGPPPQGGN 334 Query: 213 -PTAPPARVREPGRAEGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHGGE 271 P PP PG+ +G + +SR+AR PP P + + G P P G Sbjct: 335 KPQGPP----PPGKPQGPPPQGGSKSRSARSPPGK-PQGPPQQEGNNPQGPPPP---AGG 386 Query: 272 KAAAPRAPGGGGGRNPGALGRAAPPSRARQ 301 P+AP G + P + PSR Q Sbjct: 387 NPQQPQAPPAGQPQGPPRPPQGGRPSRPPQ 416 Score = 58.2 bits (139), Expect = 2e-08 Identities = 51/157 (32%), Positives = 66/157 (42%), Gaps = 24/157 (15%) Query: 154 PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG- 212 P PPP Q A + PP KP P +G G +P+ PP P + P PQ G Sbjct: 221 PQGPPPQGDNKSQSA--RSPP----GKPQGPPPQG--GNQPQGPPPPPGKPQGPPPQGGN 272 Query: 213 -PTAPPARVREPGRAEGASREPRLRSRAARPPPA-----PGPGALSRASRSRAAGRP-GP 265 P PP PG+ +G + +SR++R PP P G G+P GP Sbjct: 273 KPQGPPP----PGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 328 Query: 266 GFHGGEKAAAPRAPGGGGGRNP--GALGRAA--PPSR 298 GG K P PG G P G+ R+A PP + Sbjct: 329 PPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGK 365 Score = 57.4 bits (137), Expect = 3e-08 Identities = 52/166 (31%), Positives = 64/166 (38%), Gaps = 33/166 (19%) Query: 155 PRPPPNLQEGGQRAIFQRPPVYLGNKPT----------PPRQEGSFGGRPKSQPPLPQET 204 P PPP +G PP GNKP PP Q GS +S P PQ Sbjct: 256 PPPPPGKPQG--------PPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQ-- 305 Query: 205 AAPAPQPG--PTAPPARVREPGRAEGASREPRLRSRAARPP-----PAPGPGALSRASRS 257 P PQ G P PP PG+ +G + + + PP P P G+ SR++RS Sbjct: 306 -GPPPQGGNQPQGPPP---PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARS 361 Query: 258 RAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGA--LGRAAPPSRARQ 301 GP G P P GG + P A G+ P R Q Sbjct: 362 PPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQ 407 Score = 49.7 bits (117), Expect = 6e-06 Identities = 60/225 (26%), Positives = 79/225 (35%), Gaps = 59/225 (26%) Query: 148 ALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAP 207 +L+ P PP +GG + Q PP G PP Q G+ +P+ PP P + P Sbjct: 30 SLIAGNPQGAPP---QGGNKP--QGPPSPPGKPQGPPPQGGN---QPQGPPPPPGKPQGP 81 Query: 208 APQPG--PTAPPARVREPGRAEGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGP 265 PQ G P PP PG+ +G PPP G SR+ RS GP Sbjct: 82 PPQGGNKPQGPPP----PGKPQG-------------PPPQ---GDKSRSPRSPPGKPQGP 121 Query: 266 GFHGGEKAAAPRAPGG---GGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRA 322 GG + P P G G G + PP Sbjct: 122 PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPP-------------------------P 156 Query: 323 GSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGR 367 G Q P G+ + R R + G +G + GP PPG+ Sbjct: 157 GKPQGPPPQGD-NKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGK 200 >gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo sapiens] Length = 247 Score = 57.8 bits (138), Expect = 2e-08 Identities = 50/155 (32%), Positives = 66/155 (42%), Gaps = 19/155 (12%) Query: 154 PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGP 213 P RPPP +GG ++ PP G PP Q G+ RP PP P + P PQ G Sbjct: 99 PERPPP---QGGNQSQGTPPPP--GKPERPPPQGGNQSHRP---PPPPGKPERPPPQGGN 150 Query: 214 TA--PPARVREPGRAEGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHGGE 271 + PP PG+ EG + +SR+AR PP P + ++ G P PG G Sbjct: 151 QSQGPPPH---PGKPEGPPPQEGNKSRSARSPPGK-PQGPPQQEGNKPQGPPPPGKPQGP 206 Query: 272 KAAA-----PRAPGGGGGRNPGALGRAAPPSRARQ 301 A P+AP G + P + P R Q Sbjct: 207 PPAGGNPQQPQAPPAGKPQGPPPPPQGGRPPRPAQ 241 Score = 41.2 bits (95), Expect = 0.002 Identities = 47/173 (27%), Positives = 66/173 (38%), Gaps = 40/173 (23%) Query: 156 RPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLP------------QE 203 +P +GG + QRPP G PP Q GG PP P + Sbjct: 35 KPEGRRPQGGNQP--QRPPPPPGKPQGPPPQ----GGNQSQGPPPPPGKPEGRPPQGGNQ 88 Query: 204 TAAPAPQPG-PTAPPAR--------VREPGRAEGASREPRLRSRAARPPPAPG-PGALSR 253 + P P PG P PP + PG+ E P+ +++ RPPP PG P Sbjct: 89 SQGPPPHPGKPERPPPQGGNQSQGTPPPPGKPE--RPPPQGGNQSHRPPPPPGKPERPPP 146 Query: 254 ASRSRAAGRP-------GPGFHGGEKAAAPRAPGG---GGGRNPGALGRAAPP 296 +++ G P GP G K+ + R+P G G + G + PP Sbjct: 147 QGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPP 199 Score = 40.0 bits (92), Expect = 0.005 Identities = 48/163 (29%), Positives = 58/163 (35%), Gaps = 44/163 (26%) Query: 70 PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEG--RATPPLPHPGDHHPRHRKNRGPSAGT 127 P+R G +H R P P P +G ++ P PHPG K GP Sbjct: 120 PERPPPQGGNQSH---RPPPPPGKPERPPPQGGNQSQGPPPHPG-------KPEGPPP-- 167 Query: 128 SQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQE 187 Q G K++ R PP +G PP GNKP P Sbjct: 168 -QEGNKSRSA------------------RSPPGKPQG--------PPQQEGNKPQGPPPP 200 Query: 188 GSFGGRPKS--QPPLPQETAAPAPQPGPTAPPARVREPGRAEG 228 G G P + P PQ A PQ GP PP R P A+G Sbjct: 201 GKPQGPPPAGGNPQQPQAPPAGKPQ-GPPPPPQGGRPPRPAQG 242 Score = 35.0 bits (79), Expect = 0.15 Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 24/89 (26%) Query: 154 PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFG------GRPKSQPPL---PQET 204 P PPP QEG + + PP G PP+QEG+ G+P+ PP PQ+ Sbjct: 162 PEGPPP--QEGNKSRSARSPP---GKPQGPPQQEGNKPQGPPPPGKPQGPPPAGGNPQQP 216 Query: 205 AAPA----------PQPGPTAPPARVREP 223 AP PQ G PA+ ++P Sbjct: 217 QAPPAGKPQGPPPPPQGGRPPRPAQGQQP 245 >gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo sapiens] Length = 384 Score = 57.4 bits (137), Expect = 3e-08 Identities = 76/266 (28%), Positives = 97/266 (36%), Gaps = 42/266 (15%) Query: 193 RPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASR------EPRLRSRAARPPPAP 246 RP ++PP P+ + P T A P + + SR PR +AR PAP Sbjct: 80 RPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQSGSRLRPAAPGPRPGCSSARASPAP 139 Query: 247 G-PGALSRASRSRAA-GRPGPGFHGGEKAAAPRAPGGGGGRNPGAL---GRAAPPSRARQ 301 P A +R + RAA G GPG G P GG+ P RAAP AR Sbjct: 140 AAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQPPPLTCRRCRAAPRRSARP 199 Query: 302 -------------DAWGLSGCATVGLRRGDCDRAGSS----------QPPATSGNGERCR 338 G C T G G A SS QP G R R Sbjct: 200 FRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAASSPSADFSSDSPQPIIIFGGALRVR 259 Query: 339 FCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRR 398 C RRR G G G PA PP RR+ + + L G G S + P R Sbjct: 260 GCGGRRRSNGQGTQPGCRLL-SPA-PPRRRYRKPL---TLSFGGGVSSPTH-PVVAPRRH 313 Query: 399 VHGALQRFGGGRNLKSNWMSTTRTPR 424 ++ RF G +++ + T P+ Sbjct: 314 FPRSVPRFPAG--FRTHSLGTAPKPK 337 >gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo sapiens] Length = 384 Score = 57.4 bits (137), Expect = 3e-08 Identities = 76/266 (28%), Positives = 97/266 (36%), Gaps = 42/266 (15%) Query: 193 RPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASR------EPRLRSRAARPPPAP 246 RP ++PP P+ + P T A P + + SR PR +AR PAP Sbjct: 80 RPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQSGSRLRPAAPGPRPGCSSARASPAP 139 Query: 247 G-PGALSRASRSRAA-GRPGPGFHGGEKAAAPRAPGGGGGRNPGAL---GRAAPPSRARQ 301 P A +R + RAA G GPG G P GG+ P RAAP AR Sbjct: 140 AAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQPPPLTCRRCRAAPRRSARP 199 Query: 302 -------------DAWGLSGCATVGLRRGDCDRAGSS----------QPPATSGNGERCR 338 G C T G G A SS QP G R R Sbjct: 200 FRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAASSPSADFSSDSPQPIIIFGGALRVR 259 Query: 339 FCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRR 398 C RRR G G G PA PP RR+ + + L G G S + P R Sbjct: 260 GCGGRRRSNGQGTQPGCRLL-SPA-PPRRRYRKPL---TLSFGGGVSSPTH-PVVAPRRH 313 Query: 399 VHGALQRFGGGRNLKSNWMSTTRTPR 424 ++ RF G +++ + T P+ Sbjct: 314 FPRSVPRFPAG--FRTHSLGTAPKPK 337 >gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] Length = 384 Score = 57.4 bits (137), Expect = 3e-08 Identities = 76/266 (28%), Positives = 97/266 (36%), Gaps = 42/266 (15%) Query: 193 RPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASR------EPRLRSRAARPPPAP 246 RP ++PP P+ + P T A P + + SR PR +AR PAP Sbjct: 80 RPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQSGSRLRPAAPGPRPGCSSARASPAP 139 Query: 247 G-PGALSRASRSRAA-GRPGPGFHGGEKAAAPRAPGGGGGRNPGAL---GRAAPPSRARQ 301 P A +R + RAA G GPG G P GG+ P RAAP AR Sbjct: 140 AAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQPPPLTCRRCRAAPRRSARP 199 Query: 302 -------------DAWGLSGCATVGLRRGDCDRAGSS----------QPPATSGNGERCR 338 G C T G G A SS QP G R R Sbjct: 200 FRRPGLPLKSRPGSGTGARSCGTWGSGGGPGTAAASSPSADFSSDSPQPIIIFGGALRVR 259 Query: 339 FCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRR 398 C RRR G G G PA PP RR+ + + L G G S + P R Sbjct: 260 GCGGRRRSNGQGTQPGCRLL-SPA-PPRRRYRKPL---TLSFGGGVSSPTH-PVVAPRRH 313 Query: 399 VHGALQRFGGGRNLKSNWMSTTRTPR 424 ++ RF G +++ + T P+ Sbjct: 314 FPRSVPRFPAG--FRTHSLGTAPKPK 337 >gi|19924099 synapsin I isoform Ia [Homo sapiens] Length = 705 Score = 57.0 bits (136), Expect = 4e-08 Identities = 64/218 (29%), Positives = 83/218 (38%), Gaps = 33/218 (15%) Query: 123 PSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPT 182 PS G LG++T + G A P PP G QR Q PP L +P Sbjct: 437 PSPGALPLGRQTS-----QQPAGPPAQQRPPPQGGPPQPGPGPQR---QGPP--LQQRPP 486 Query: 183 PPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRL----RSR 238 P Q+ G P + PLPQ P+P P P ++ P + +G P Sbjct: 487 PQGQQHLSGLGPPAGSPLPQR--LPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPP 544 Query: 239 AARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSR 298 AARPP +P P R AG P + + + AP G PG R PP Sbjct: 545 AARPPASPSP--------QRQAGPPQA---TRQTSVSGPAPPKASGAPPGGQQRQGPP-- 591 Query: 299 ARQDAWGLSGCATVGLRRGDCDRAG--SSQPPATSGNG 334 Q G +G + G R G ++Q P SG G Sbjct: 592 --QKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPG 627 Score = 42.0 bits (97), Expect = 0.001 Identities = 57/208 (27%), Positives = 73/208 (35%), Gaps = 29/208 (13%) Query: 178 GNKPTPP-----RQEGSFGGRPKSQPPLPQETAAPAPQPGP--TAPPARVREPGRAE--- 227 G P+P RQ P +Q P + P P PGP PP + R P + + Sbjct: 434 GQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHL 493 Query: 228 ---GASREPRLRSRAARPPPAPGPGALSRASRSRAAG---RPGPGFHGGEKAAAPRAPGG 281 G L R P AP A A ++ G RP G G AA P A Sbjct: 494 SGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPA--- 550 Query: 282 GGGRNPGALGRAAPPSRARQDAWGLSGCA---TVGLRRGDCDRAGSSQ-PPATSGNGERC 337 +P +A PP RQ + +SG A G G R G Q PP +G + Sbjct: 551 ----SPSPQRQAGPPQATRQTS--VSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQA 604 Query: 338 RFCRRRRRRGGGGEGEGTHATHGPASPP 365 R G + + GPA P Sbjct: 605 SQAGPVPRTGPPTTQQPRPSGPGPAGRP 632 Score = 36.6 bits (83), Expect = 0.052 Identities = 46/189 (24%), Positives = 65/189 (34%), Gaps = 40/189 (21%) Query: 87 APVFPVAKGSVPSEGRATPPLPHPGDHH--PRHRKNRGPS----AGTSQLGKKTQCRSLF 140 AP P ++ + P++G+ P G P R PS AG Q ++T Sbjct: 514 APQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSG-- 571 Query: 141 LRTKGLCALLLELPPRPPP--NLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQP 198 P PP GGQ+ Q PP P RQ G P++ P Sbjct: 572 --------------PAPPKASGAPPGGQQR--QGPPQKPPGPAGPTRQASQAGPVPRTGP 615 Query: 199 PLPQETAAPAPQPGPTAPPARVREPGR--------AEGASREPRLRSRAA------RPPP 244 P Q+ P P P ++P + A G P+L + P P Sbjct: 616 PTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQLNKSQSLTNAFNLPEP 675 Query: 245 APGPGALSR 253 AP +LS+ Sbjct: 676 APPRPSLSQ 684 Score = 35.8 bits (81), Expect = 0.088 Identities = 54/223 (24%), Positives = 71/223 (31%), Gaps = 51/223 (22%) Query: 91 PVAKGSVPSEG----RATPPLPH-PGDHHPRHRKNRGPSAGT-----------------S 128 P +G P G R PPL P +H GP AG+ S Sbjct: 461 PPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPAS 520 Query: 129 QLGKKTQCRSLFLR--TKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQ 186 Q TQ + R G A PP P ++ G ++ V + P PP+ Sbjct: 521 QAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSV---SGPAPPKA 577 Query: 187 EGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAP 246 G+ G + Q P P PGP P + + G PR + P Sbjct: 578 SGAPPGGQQRQGP-------PQKPPGPAGPTRQASQAGPV------PRTGPPTTQQPRPS 624 Query: 247 GPGALSRASRSRAAGRPGPGF--HGGEKAAAPRAPGGGGGRNP 287 GPG AGRP P + P GG +P Sbjct: 625 GPG---------PAGRPKPQLAQKPSQDVPPPATAAAGGPPHP 658 Score = 30.8 bits (68), Expect = 2.8 Identities = 32/111 (28%), Positives = 36/111 (32%), Gaps = 25/111 (22%) Query: 200 LPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAARP---PPAPGPG------- 249 LP +P P PP PG G RS P P AP PG Sbjct: 17 LPNGYMTDLQRPQPPPPPPGAHSPGATPGPGTATAERSSGVAPAASPAAPSPGSSGGGGF 76 Query: 250 --ALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSR 298 +LS A + A AAA + GGG G GR SR Sbjct: 77 FSSLSNAVKQTTAA-----------AAATFSEQVGGG--SGGAGRGGAASR 114 >gi|19924097 synapsin I isoform Ib [Homo sapiens] Length = 669 Score = 57.0 bits (136), Expect = 4e-08 Identities = 64/218 (29%), Positives = 83/218 (38%), Gaps = 33/218 (15%) Query: 123 PSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPT 182 PS G LG++T + G A P PP G QR Q PP L +P Sbjct: 437 PSPGALPLGRQTS-----QQPAGPPAQQRPPPQGGPPQPGPGPQR---QGPP--LQQRPP 486 Query: 183 PPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRL----RSR 238 P Q+ G P + PLPQ P+P P P ++ P + +G P Sbjct: 487 PQGQQHLSGLGPPAGSPLPQR--LPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPP 544 Query: 239 AARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSR 298 AARPP +P P R AG P + + + AP G PG R PP Sbjct: 545 AARPPASPSP--------QRQAGPPQA---TRQTSVSGPAPPKASGAPPGGQQRQGPP-- 591 Query: 299 ARQDAWGLSGCATVGLRRGDCDRAG--SSQPPATSGNG 334 Q G +G + G R G ++Q P SG G Sbjct: 592 --QKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPG 627 Score = 42.0 bits (97), Expect = 0.001 Identities = 57/208 (27%), Positives = 73/208 (35%), Gaps = 29/208 (13%) Query: 178 GNKPTPP-----RQEGSFGGRPKSQPPLPQETAAPAPQPGP--TAPPARVREPGRAE--- 227 G P+P RQ P +Q P + P P PGP PP + R P + + Sbjct: 434 GQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHL 493 Query: 228 ---GASREPRLRSRAARPPPAPGPGALSRASRSRAAG---RPGPGFHGGEKAAAPRAPGG 281 G L R P AP A A ++ G RP G G AA P A Sbjct: 494 SGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPA--- 550 Query: 282 GGGRNPGALGRAAPPSRARQDAWGLSGCA---TVGLRRGDCDRAGSSQ-PPATSGNGERC 337 +P +A PP RQ + +SG A G G R G Q PP +G + Sbjct: 551 ----SPSPQRQAGPPQATRQTS--VSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQA 604 Query: 338 RFCRRRRRRGGGGEGEGTHATHGPASPP 365 R G + + GPA P Sbjct: 605 SQAGPVPRTGPPTTQQPRPSGPGPAGRP 632 Score = 37.7 bits (86), Expect = 0.023 Identities = 42/174 (24%), Positives = 61/174 (35%), Gaps = 34/174 (19%) Query: 87 APVFPVAKGSVPSEGRATPPLPHPGDHH--PRHRKNRGPS----AGTSQLGKKTQCRSLF 140 AP P ++ + P++G+ P G P R PS AG Q ++T Sbjct: 514 APQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSG-- 571 Query: 141 LRTKGLCALLLELPPRPPP--NLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQP 198 P PP GGQ+ Q PP P RQ G P++ P Sbjct: 572 --------------PAPPKASGAPPGGQQR--QGPPQKPPGPAGPTRQASQAGPVPRTGP 615 Query: 199 PLPQETAAPAPQPGPTAPPARVREPGR--------AEGASREPRLRSRAARPPP 244 P Q+ P P P ++P + A G P+L++ A+ P Sbjct: 616 PTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQLKASPAQAQP 669 Score = 36.2 bits (82), Expect = 0.068 Identities = 55/229 (24%), Positives = 72/229 (31%), Gaps = 49/229 (21%) Query: 91 PVAKGSVPSEG----RATPPLPH-PGDHHPRHRKNRGPSAGT-----------------S 128 P +G P G R PPL P +H GP AG+ S Sbjct: 461 PPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPAS 520 Query: 129 QLGKKTQCRSLFLR--TKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQ 186 Q TQ + R G A PP P ++ G ++ V + P PP+ Sbjct: 521 QAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSV---SGPAPPKA 577 Query: 187 EGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAP 246 G+ G + Q P P PGP P + + G PR + P Sbjct: 578 SGAPPGGQQRQGP-------PQKPPGPAGPTRQASQAGPV------PRTGPPTTQQPRPS 624 Query: 247 GPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAP 295 GPG AGRP P P G P +A+P Sbjct: 625 GPG---------PAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQLKASP 664 Score = 30.8 bits (68), Expect = 2.8 Identities = 32/111 (28%), Positives = 36/111 (32%), Gaps = 25/111 (22%) Query: 200 LPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAARP---PPAPGPG------- 249 LP +P P PP PG G RS P P AP PG Sbjct: 17 LPNGYMTDLQRPQPPPPPPGAHSPGATPGPGTATAERSSGVAPAASPAAPSPGSSGGGGF 76 Query: 250 --ALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSR 298 +LS A + A AAA + GGG G GR SR Sbjct: 77 FSSLSNAVKQTTAA-----------AAATFSEQVGGG--SGGAGRGGAASR 114 >gi|4885407 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 [Homo sapiens] Length = 1203 Score = 56.6 bits (135), Expect = 5e-08 Identities = 98/350 (28%), Positives = 118/350 (33%), Gaps = 73/350 (20%) Query: 44 PAATTQQVREAADIIARWSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRA 103 P+A T AA IA + H S + L P+ P A+ ++ Sbjct: 890 PSAPTPSAGVAATTIAGFGHFHKALGGSLSS------SDSPLLTPLQPGARSPQAAQPSP 943 Query: 104 TPPLPHPGDHHPRH-----RKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPR-- 156 PP G P H +R PS+ QLG+ SL L T L E PPR Sbjct: 944 APPGARGGLGLPEHFLPPPPSSRSPSSSPGQLGQPPGELSLGLATGPLST--PETPPRQP 1001 Query: 157 PPPNLQEGGQRAIFQ---------RPPVYLGNKP-----TPPRQEGSFGG---RPKSQPP 199 PP+L G PP + P PPR GS G P S PP Sbjct: 1002 EPPSLVAGASGGASPVGFTPRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPP 1061 Query: 200 LPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAPGPGALSRASRSRA 259 PQ PQ T P PGR +++ +L S + P G L RAS Sbjct: 1062 PPQ-----VPQRRGTPP----LTPGR---LTQDLKLISASQPALPQDGAQTLRRAS---- 1105 Query: 260 AGRPGPGFHGGEKAAAPRAP-GGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRRGD 318 P G AA P P GGG G+ G PP R +G V L R Sbjct: 1106 -----PHSSGESMAAFPLFPRAGGGSGGSGSSGGLGPPGR----PYGAIPGQHVTLPR-- 1154 Query: 319 CDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRR 368 + S PP S G R G T GP PG R Sbjct: 1155 -KTSSGSLPPPLSLFGARAT------------SSGGPPLTAGPQREPGAR 1191 Score = 53.1 bits (126), Expect = 5e-07 Identities = 73/281 (25%), Positives = 92/281 (32%), Gaps = 37/281 (13%) Query: 172 RPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASR 231 R P P PP G G P+ P P + +P+ PG P G A G Sbjct: 934 RSPQAAQPSPAPPGARGGLG-LPEHFLPPPPSSRSPSSSPGQLGQPPGELSLGLATGPLS 992 Query: 232 EPRLRSRAARPPP--APGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGA 289 P R PP A G S + G PG G P AP G + Sbjct: 993 TPETPPRQPEPPSLVAGASGGASPVGFTPRGGLSPPGHSPGPPRTFPSAPPRASGSHGSL 1052 Query: 290 L---GRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQP------------PATSGNG 334 L + PP + Q + T G D +SQP + +G Sbjct: 1053 LLPPASSPPPPQVPQRRG--TPPLTPGRLTQDLKLISASQPALPQDGAQTLRRASPHSSG 1110 Query: 335 ERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAV-LRAGSGEGSRRGLQLT 393 E R GGG G G + G PPGR + G V L + GS Sbjct: 1111 ESMAAFPLFPRAGGGSGGSG---SSGGLGPPGRPYGAIPGQHVTLPRKTSSGS------L 1161 Query: 394 PPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGPKMV 434 PPP + GA GG L T P+R + P+ V Sbjct: 1162 PPPLSLFGARATSSGGPPL-------TAGPQREPGARPEPV 1195 Score = 33.5 bits (75), Expect = 0.44 Identities = 48/161 (29%), Positives = 60/161 (37%), Gaps = 28/161 (17%) Query: 198 PPLPQETAAPAPQP-GPTAPPARVREPGRAEGAS--REPRLRSRAARPPPAPGP-----G 249 PP ++ PQ G A E EGA ++P RS RP P+P P G Sbjct: 5 PPSMRKRLYSLPQQVGAKAWIMDEEEDAEEEGAGGRQDPSRRSIRLRPLPSPSPSAAAGG 64 Query: 250 ALSRASRSRAAGRPGPG--------------FHGGEKAAAPRAPGGGG---GRNPGALGR 292 SR+S AA GP F G + R G GG G + G L Sbjct: 65 TESRSSALGAADSEGPARGAGKSSTNGDCRRFRGSLASLGSRGGGSGGTGSGSSHGHLHD 124 Query: 293 AAPPSR--ARQDAWGLSGCATVGLRRGDCDRAGSSQPPATS 331 +A R A DA GL + +R G+S PA S Sbjct: 125 SAEERRLIAEGDASPGEDRTPPGL-AAEPERPGASAQPAAS 164 >gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 preproprotein [Homo sapiens] Length = 331 Score = 56.6 bits (135), Expect = 5e-08 Identities = 46/150 (30%), Positives = 63/150 (42%), Gaps = 19/150 (12%) Query: 154 PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG- 212 P PPP +G + Q PP KP P +G G +P+ PP P + P PQ G Sbjct: 199 PQGPPP---QGDKSRSSQSPP----GKPQGPPPQG--GNQPQGPPPPPGKPQGPPPQGGN 249 Query: 213 -PTAPPARVREPGRAEGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHGGE 271 P PP PG+ +G + +S++AR PP P + + G P P G Sbjct: 250 KPQGPPP----PGKPQGPPAQGGSKSQSARSPPGK-PQGPPQQEGNNPQGPPPP---AGG 301 Query: 272 KAAAPRAPGGGGGRNPGALGRAAPPSRARQ 301 P+AP G + P + PSR Q Sbjct: 302 NPQQPQAPPAGQPQGPPRPPQGGRPSRPPQ 331 Score = 55.8 bits (133), Expect = 8e-08 Identities = 82/312 (26%), Positives = 109/312 (34%), Gaps = 61/312 (19%) Query: 154 PPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG- 212 P PPP +GG + PP KP P +G P+S P PQ P PQ G Sbjct: 57 PQGPPP---QGGNKPQGPPPP----GKPQGPPPQGDKSRSPRSPPGKPQ---GPPPQGGN 106 Query: 213 -PTAPPARVREPGRAEGASREPRLRSRAARPPPAP-GP---GALSRASRSRAAGRPGPGF 267 P PP PG+ +G + R + PP P GP G SR+ RS GP Sbjct: 107 QPQGPPP---PPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPP 163 Query: 268 HGGEKAAAPRAPGG-------GGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCD 320 GG + P P G GG+ P + PP Q +GD Sbjct: 164 QGGNQPQGPPPPPGKPQGPPPQGGKKP----QGPPPPGKPQGP----------PPQGDKS 209 Query: 321 RAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHG-PASPPGRRHDEEVGAAVLR 379 R+ S P G + GG + +G G P PP + ++ G Sbjct: 210 RSSQSPPGKPQGPPPQ-----------GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG 258 Query: 380 AGSG---EGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGPKMVAD 436 G +G + PP + G Q+ G N + P++ A A Sbjct: 259 KPQGPPAQGGSKSQSARSPPGKPQGPPQQ--EGNNPQGPPPPAGGNPQQPQAP----PAG 312 Query: 437 QTSGISRPPTAG 448 Q G RPP G Sbjct: 313 QPQGPPRPPQGG 324 Score = 47.4 bits (111), Expect = 3e-05 Identities = 72/317 (22%), Positives = 101/317 (31%), Gaps = 81/317 (25%) Query: 171 QRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG--PTAPPARVREPGRAEG 228 + P + P P +G G +P+ PP P + P PQ G P PP PG+ +G Sbjct: 26 EESPSLIAGNPQGPSPQG--GNKPQGPPPPPGKPQGPPPQGGNKPQGPPP----PGKPQG 79 Query: 229 ASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGG------- 281 PPP G SR+ RS GP GG + P P G Sbjct: 80 -------------PPPQ---GDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 123 Query: 282 -GGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQ------------PP 328 GG R G P Q S + G +G + G+ PP Sbjct: 124 QGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 183 Query: 329 ATSG-----------------NGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDE 371 G G++ R + + G +G + GP PPG+ Sbjct: 184 PQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQ-- 241 Query: 372 EVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASGP 431 G Q PPP + G + GG ++ + R+P P Sbjct: 242 ---------GPPPQGGNKPQGPPPPGKPQGPPAQ-GGSKS------QSARSPPGKPQGPP 285 Query: 432 KMVADQTSGISRPPTAG 448 + + G PP AG Sbjct: 286 QQEGNNPQG--PPPPAG 300 >gi|4826998 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Homo sapiens] Length = 707 Score = 56.2 bits (134), Expect = 6e-08 Identities = 47/152 (30%), Positives = 58/152 (38%), Gaps = 22/152 (14%) Query: 156 RPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTA 215 +PPP Q+ + + Q P G PP + P + PP P P PT Sbjct: 98 QPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSA----PPATPPTSGAPPGSGPGPTPTP 153 Query: 216 PPARVREPGRAEG----ASREPRLRSRAARPPP----APGPGALSRASRSRAAGRPGPGF 267 PPA P A +S P +A PPP PGPG + PGPG Sbjct: 154 PPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQG-------PGPGG 206 Query: 268 -HGGEKAAAPRAPGGGGGRNPGALGRAAPPSR 298 GG+ P+ GG G PG G PP R Sbjct: 207 PKGGKMPGGPKPGGGPGLSTPG--GHPKPPHR 236 Score = 50.1 bits (118), Expect = 5e-06 Identities = 60/254 (23%), Positives = 77/254 (30%), Gaps = 30/254 (11%) Query: 159 PNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQ--ETAAPAPQPGPTAP 216 P + G + PP + + PP+Q P PP PQ + P P P ++ Sbjct: 49 PGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSK 108 Query: 217 PARVREPGRAEGASREPRLRSRA--ARP-----PPAPGPGALSRASRSRAAGRPGPGFHG 269 P + PG A G P S A A P PP GPG + + PG Sbjct: 109 PVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPT 168 Query: 270 GEKAAAPRAPGGGGGRNPGALGRAAP-------PSRARQDAWGLSGCATVGLRRGDCDRA 322 + P P GG P P P + G G G Sbjct: 169 PPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPG 228 Query: 323 GSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGS 382 G +PP G RGG H H PPG G + + Sbjct: 229 GHPKPPHRGGG----------EPRGGRQHHPPYHQQHHQGPPPG----GPGGRSEEKISD 274 Query: 383 GEGSRRGLQLTPPP 396 EG + L L P Sbjct: 275 SEGFKANLSLLRRP 288 >gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] Length = 2752 Score = 56.2 bits (134), Expect = 6e-08 Identities = 83/335 (24%), Positives = 113/335 (33%), Gaps = 62/335 (18%) Query: 180 KPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAP-------PARVREPGRAEGASRE 232 +P+P + S G P + PL E +PQP T P P P R + Sbjct: 349 RPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKS 408 Query: 233 PR---LRSRAARPPPAPGPGALSRASRSRAAG---RPGPGFHGGEKAAAPRAPGGGGGR- 285 P S + PP+P P +SR + S P PG H E +++P + GR Sbjct: 409 PEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSH-REISSSPTSKNRSHGRA 467 Query: 286 --------NPG-ALGRAAPP------------------SRARQDAWGLSGCATVGLRRGD 318 P +GR+ P SR+R W S A R Sbjct: 468 KRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRS 527 Query: 319 CDRAGSSQPPATSG--------NGERCRFCRRRRRRGGGGEGEGTHATHGPA-------S 363 R G S+ P G R R RR R G + PA Sbjct: 528 PQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSR 587 Query: 364 PPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPP----RRVHGALQRFGGGRN-LKSNWMS 418 P RR R+ S +RRG + P R ++R R+ + + S Sbjct: 588 TPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRS 647 Query: 419 TTRTPRRSGASGPKMVADQTSGISRPPTAGIGTSR 453 +RTP R G S + A + SR P G SR Sbjct: 648 RSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSR 682 Score = 50.1 bits (118), Expect = 5e-06 Identities = 82/317 (25%), Positives = 107/317 (33%), Gaps = 55/317 (17%) Query: 155 PRPPPNLQEGGQ----------RAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQET 204 PR P Q G RA+ +R +K P EGS + P T Sbjct: 1608 PRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRT 1667 Query: 205 AAPAPQPGPTAPPARVREPGRAEGASREPRL--------RSRAARPPPAPGPGALSRASR 256 A + P P + R P R + P L RSR+A P R R Sbjct: 1668 ARRGSRSSPE-PKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRR 1726 Query: 257 SRAAGRPGPGFHGGEK-----AAAPRAPGGGG-GRNPGALGRAAPPSRARQDAWGLSGCA 310 S + P P A++PR GR+P R SR+R Sbjct: 1727 SPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRRE-----K 1781 Query: 311 TVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHD 370 T RR D R+GSSQ + R R RRRRGG G + A + RR Sbjct: 1782 TRTTRRRD--RSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRR-- 1837 Query: 371 EEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASG 430 RRG TPP R + R +S ++ T RRS + Sbjct: 1838 ----------------RRGRSRTPPTSRKR-SRSRTSPAPWKRSRSRASPATHRRSRSRT 1880 Query: 431 P----KMVADQTSGISR 443 P + +TS +SR Sbjct: 1881 PLISRRRSRSRTSPVSR 1897 Score = 42.0 bits (97), Expect = 0.001 Identities = 59/246 (23%), Positives = 83/246 (33%), Gaps = 16/246 (6%) Query: 192 GRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAPGPGAL 251 GR +S+ P + + P +R R P R SR P R R+ PA Sbjct: 571 GRSRSRTPARRGRSRSRT---PARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRT 627 Query: 252 SRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGC-A 310 R R+ R G ++ P G R P GR+ + AR+ S A Sbjct: 628 RSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPA 687 Query: 311 TVGLRRGDCDRAGSSQPPATSGNG-ERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRH 369 G R R G S+ + G R +RR R G E + T +R Sbjct: 688 RRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRT-------SQRR 740 Query: 370 DEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGAL---QRFGGGRNLKSNWMSTTRTPRRS 426 + ++ S SRR L+ P + L + G T RS Sbjct: 741 SRSNSSPEMKK-SRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRS 799 Query: 427 GASGPK 432 G+S PK Sbjct: 800 GSSQPK 805 Score = 35.4 bits (80), Expect = 0.12 Identities = 67/291 (23%), Positives = 101/291 (34%), Gaps = 33/291 (11%) Query: 178 GNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRS 237 G P+P G P S+P P++P ++P + + Sbjct: 293 GRSPSPASGRRGEGDAPFSEP-------GTTSTQRPSSPETATKQPSSPYEDKDKDKKEK 345 Query: 238 RAARPPPAPGPGALSRASRSRAAGRPGPGF---HGGEKAAAPRAPGGGGGRNPGA----- 289 A RP P+P R+S P P HGG P NP + Sbjct: 346 SATRPSPSP-----ERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPT 400 Query: 290 LGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQP------PATSGNGERCRFCRRR 343 R+ P S + S + + R SS P PA + E + Sbjct: 401 RDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSK 460 Query: 344 RRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPR-RVHGA 402 R G + + +H +H P+ GR A R+ S ++RG + P+ R + Sbjct: 461 NRSHGRAKRDKSH-SHTPSRRMGRSRSPAT-AKRGRSRSRTPTKRGHSRSRSPQWRRSRS 518 Query: 403 LQRFGGGRNLKSNWMSTTRTPRRSGASGPKMVADQTSGISRPPTAGIGTSR 453 QR+G R+ + S R+P+R G S + Q G SR G SR Sbjct: 519 AQRWGRSRSPQRRGRS--RSPQRPGWSRSRNT--QRRGRSRSARRGRSHSR 565 Score = 35.0 bits (79), Expect = 0.15 Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 18/164 (10%) Query: 93 AKGSVPSEGRA-TPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALLL 151 ++ P GR+ + L G H R + RG S +S+ +K + R+ R++ + + Sbjct: 692 SRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSE--RKNKSRTSQRRSRSNSSPEM 749 Query: 152 ELP------------PRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPP 199 + PR + +R++ P TPPR+ S +PK++ Sbjct: 750 KKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSR 809 Query: 200 LPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAARPP 243 P + + P P + + P R +S P + ++ PP Sbjct: 810 TPPRRSRSSSSP---PPKQKSKTPSRQSHSSSSPHPKVKSGTPP 850 Score = 35.0 bits (79), Expect = 0.15 Identities = 44/177 (24%), Positives = 62/177 (35%), Gaps = 19/177 (10%) Query: 91 PVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCALL 150 P K +V EGR PP P P R + S+ +S + S + + Sbjct: 2584 PAPKEAV-REGR--PPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2640 Query: 151 LELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRP-------KSQPPLPQE 203 P+ + G +A+ P KP P + +P +S P E Sbjct: 2641 SSSSSSSSPSPAKPGPQAL---PKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVE 2697 Query: 204 TAAPAPQPGPTAPPARVREPGRAEGA---SREPRLRSRAARPPPAPGPGALSRASRS 257 P+PQP P + E G G SR P + R P P P R+SRS Sbjct: 2698 RRRPSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHKRRRETPSPRP---MRHRSSRS 2751 Score = 34.3 bits (77), Expect = 0.26 Identities = 76/355 (21%), Positives = 117/355 (32%), Gaps = 57/355 (16%) Query: 60 RWSAQHSMTNPKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHR- 118 R S S PK+ +H +P V G+ P +G T P + P+ R Sbjct: 813 RRSRSSSSPPPKQKSKTPSRQSHSS-SSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRS 871 Query: 119 ----------KNRGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRA 168 K+R PS + + +S PPR P+ Q Sbjct: 872 CFESSPDPELKSRTPSRHSCSGSSPPRVKS-------------STPPRQSPSRSSSPQPK 918 Query: 169 IFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVRE----PG 224 + PRQ G S P + T+ P+ + P E P Sbjct: 919 V---------KAIISPRQRSHSGS---SSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPR 966 Query: 225 RAEGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGG- 283 + S P + + PP G++S + +A PGP G K+ P+ Sbjct: 967 YSHSGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQTPPGPSL-SGSKSPCPQEKSKDSL 1025 Query: 284 -GRNPGALGRAA------PPSRARQDAWGLSGCATVGLRRGDCD-RAGSSQPPATSGNGE 335 PG+L A PP + +G+S G + D R+ +S P + E Sbjct: 1026 VQSCPGSLSLCAGVKSSTPPG---ESYFGVSSLQLKGQSQTSPDHRSDTSSPEVRQSHSE 1082 Query: 336 RCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHD--EEVGAAVLRAG-SGEGSR 387 + + GG + AS R D E + +L++G S E SR Sbjct: 1083 SPSLQSKSQTSPKGGRSRSSSPVTELASRSPIRQDRGEFSASPMLKSGMSPEQSR 1137 Score = 32.7 bits (73), Expect = 0.75 Identities = 54/245 (22%), Positives = 79/245 (32%), Gaps = 25/245 (10%) Query: 205 AAPAPQPGPTAPPARVRE-PGRAEGASREPRLRSR-AARPPPAPGPGALSRASRSRAAGR 262 ++P P+ PP R R + + SR P RSR ++ PPP SR S S ++ Sbjct: 782 SSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPH 841 Query: 263 PGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRA 322 P K + P G +P A ++ P R+ + S + R Sbjct: 842 P--------KVKSGTPPRQGSITSPQANEQSVTPQ--RRSCFESSPDPELKSRTPSRHSC 891 Query: 323 GSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVLRAGS 382 S PP + R+ SP R H + R S Sbjct: 892 SGSSPPRVKSS--------TPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTS 943 Query: 383 GEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRRSGASG-----PKMVADQ 437 RR ++P L R+ + + TP R SG PK+ A Sbjct: 944 RTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQT 1003 Query: 438 TSGIS 442 G S Sbjct: 1004 PPGPS 1008 >gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 preproprotein [Homo sapiens] Length = 198 Score = 55.8 bits (133), Expect = 8e-08 Identities = 47/153 (30%), Positives = 64/153 (41%), Gaps = 19/153 (12%) Query: 155 PRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG-P 213 P PPP +G PP GNKP P G +P+ PP ++ +P PG P Sbjct: 50 PPPPPGKPQG--------PPPQGGNKPQGPPPPG----KPQGPPPQGDKSRSPRSPPGKP 97 Query: 214 TAPPARVREP-GRAEGASREPRLRSRAARP--PPAPGPGALSRASRSRAAGRPGPGFHGG 270 PP + +P G +P+ +P PPA G G+ S+++RS GP G Sbjct: 98 QGPPPQGGKPQGPPPQGGNKPQGPPPPGKPQGPPAQG-GSKSQSARSPPGKPQGPPQQEG 156 Query: 271 EKAAAPRAPGGGGGRNPGA--LGRAAPPSRARQ 301 P P GG + P A G+ P R Q Sbjct: 157 NNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQ 189 Score = 48.1 bits (113), Expect = 2e-05 Identities = 41/145 (28%), Positives = 58/145 (40%), Gaps = 25/145 (17%) Query: 171 QRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPG--PTAPPARVREPGRAEG 228 + P + P P +G G +P+ PP P + P PQ G P PP PG+ +G Sbjct: 26 EESPSLIAGNPQGPSPQG--GNKPQGPPPPPGKPQGPPPQGGNKPQGPP----PPGKPQG 79 Query: 229 ------ASREPRLRSRAARPPP-------APGPGALSRASRSRAAGRP-GPGFHGGEKAA 274 SR PR + PP P P ++ G+P GP GG K+ Sbjct: 80 PPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQ 139 Query: 275 APRAPGG---GGGRNPGALGRAAPP 296 + R+P G G + G + PP Sbjct: 140 SARSPPGKPQGPPQQEGNNPQGPPP 164 >gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] Length = 703 Score = 54.7 bits (130), Expect = 2e-07 Identities = 75/269 (27%), Positives = 91/269 (33%), Gaps = 62/269 (23%) Query: 155 PRPPPNLQEGGQRAIFQRP--PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAP--- 209 P PP + GQ P P+ L +P PP + G G P P P + P Sbjct: 51 PVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRG--PPGPPGFPGKPGMGKPGLH 108 Query: 210 -QPGPTAPPA--------------RVREPGRAEGASREPRLRSRAAR-----PPPAPGPG 249 QPGP PP +V PG+ G EP +R PP PGP Sbjct: 109 GQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQP-GLRGEPGIRGDQGLRGPPGPPGLPGPS 167 Query: 250 ALSRASRSRAAGRPG-PGFHG-----GE----------------KAAAPRAPGGGGGRNP 287 ++ + A G PG PGF G GE + P APG GG P Sbjct: 168 GITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGA--P 225 Query: 288 GALGRAAPPSRARQDAWGL---------SGCATVGLRRGDCDRAGSSQPPATSGNGERCR 338 G G P + GL SG V RG+ G PP G G Sbjct: 226 GPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGA 285 Query: 339 FCRRRRRRGGGGEGE-GTHATHGPASPPG 366 + G +GE GT G P G Sbjct: 286 AGLPGPQGPSGAKGEPGTRGPPGLIGPTG 314 Score = 40.8 bits (94), Expect = 0.003 Identities = 76/278 (27%), Positives = 88/278 (31%), Gaps = 57/278 (20%) Query: 130 LGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGS 189 LG T SL L L L+L PR GG Y K P Q+G Sbjct: 2 LGTLTPLSSLLLL---LLVLVLGCGPRASSGGGAGGAAG-------YAPVKYIQPMQKGP 51 Query: 190 FGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAPGPG 249 G PP + P P P EPG PP PGP Sbjct: 52 VG------PPFREGKGQYLEMPLPLLPMDLKGEPG-----------------PPGKPGPR 88 Query: 250 ALSRASRSRAAGRPG---PGFHGGEKAAAPRAPGG---GGGRNPGALGRAAPPSRARQDA 303 G+PG PG HG A P PG G PG G+ PP + Sbjct: 89 G--PPGPPGFPGKPGMGKPGLHGQPGPAGP--PGFSRMGKAGPPGLPGKVGPPGQP---- 140 Query: 304 WGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGG----EGE-GTHAT 358 GL G + RGD G PP G + +G G +GE G Sbjct: 141 -GLRGEPGI---RGDQGLRGPPGPPGLPGPSG-ITIPGKPGAQGVPGPPGFQGEPGPQGE 195 Query: 359 HGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPP 396 GP G + D VG L G+G G P P Sbjct: 196 PGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGP 233 Score = 39.7 bits (91), Expect = 0.006 Identities = 58/217 (26%), Positives = 72/217 (33%), Gaps = 28/217 (12%) Query: 183 PPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAARP 242 PP GS G + PP P+ A P PG +R G + +P + P Sbjct: 359 PPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPG----IRGDQGPSGLAGKPGVPGERGLP 414 Query: 243 PPAPGPGALSRASRSRAAGRP-GPGFHG--GEKA--AAPRAPG-GGGGRNPGALGRAAPP 296 PG GRP GPG G G+K P PG G PG G A P Sbjct: 415 GAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPI 474 Query: 297 S----RARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEG 352 + GL G G R G+ AG + PP G+ G Sbjct: 475 GPQGLPGLKGEPGLPGPPGEG-RAGEPGTAGPTGPPGVPGS-------------PGITGP 520 Query: 353 EGTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRG 389 G GP PG + + L G EG+ G Sbjct: 521 PGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLG 557 >gi|110735435 collagen, type V, alpha 3 preproprotein [Homo sapiens] Length = 1745 Score = 54.7 bits (130), Expect = 2e-07 Identities = 78/282 (27%), Positives = 100/282 (35%), Gaps = 39/282 (13%) Query: 157 PPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFG--GRPKSQPPLPQETAAPAPQ---- 210 PP + Q+ +A+ Q+ + + P P G G G P P L E A PQ Sbjct: 457 PPVSFQQAQAQAVLQQTQLSMKGPPGPVGLTGRPGPVGLP-GHPGLKGEEGAEGPQGPRG 515 Query: 211 -PGPTAPPARVREPGR--AEGASREPRLRSRAARP--PPAPG-PGALSRASRSRAAGRPG 264 GP PP RV + GR A+GA P PG PG + G+PG Sbjct: 516 LQGPHGPPGRVGKMGRPGADGARGLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPG 575 Query: 265 PGFHGGEKAA-APRAPGGGGGRNPGALG----RAAPPSRARQDAWGLSGCATVGLRRGDC 319 P GE+ A P P G G PG G R +P R G+ G +G+ Sbjct: 576 PPGEDGERGAEGPPGPTGQAG-EPGPRGLLGPRGSPGPTGRPGVTGIDGAPGA---KGNV 631 Query: 320 DRAGSSQPPATSGN-------GERCRFCRRRRRRGGGGEG-EGTHATHGPASPPGRRHDE 371 G PP GN G + + G G G + GP PG H+ Sbjct: 632 GPPGEPGPPGQQGNHGSQGLPGPQGLIGTPGEKGPPGNPGIPGLPGSDGPLGHPG--HEG 689 Query: 372 EVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLK 413 G + G G P PR V G G R L+ Sbjct: 690 PTGEKGAQGPPGSAGPPGY---PGPRGVKGT----SGNRGLQ 724 Score = 48.1 bits (113), Expect = 2e-05 Identities = 101/405 (24%), Positives = 130/405 (32%), Gaps = 58/405 (14%) Query: 70 PKRSGDMGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQ 129 P GD+G+ A G P +G G PP D P H RG Q Sbjct: 850 PGPKGDVGQDGAPGIPGEKGLPGLQGPPGFPGPKGPPGHQGKDGRPGHPGQRGELGFQGQ 909 Query: 130 LGKKTQCRSLFLRTK-GLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEG 188 G L + K G L E P PP PP G P EG Sbjct: 910 TGPPGPAGVLGPQGKTGEVGPLGERGPPGPPG------------PPGEQG----LPGLEG 953 Query: 189 SFGGRPKSQPPLPQETAAPA------------PQPGPTAPPARVREPGRAEGASREPRLR 236 G + + PP P PA PGPT PG GA+ P Sbjct: 954 REGAKGELGPPGPLGKEGPAGLRGFPGPKGGPGDPGPTGLKGDKGPPGPV-GANGSP--- 1009 Query: 237 SRAARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRN--PGALGRAA 294 R P P G + +S + G GP G + + R P G G++ PG LG Sbjct: 1010 --GERGPLGPA-GGIGLPGQSGSEGPVGPA--GKKGSRGERGPPGPTGKDGIPGPLGPLG 1064 Query: 295 PPSRARQDA-WGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGE 353 PP A G G +G G + PP G R G + Sbjct: 1065 PPGAAGPSGEEGDKGDVGAPGHKGSKGDKGDAGPPGQPG-------IRGPAGHPGPPGAD 1117 Query: 354 GTHATHGPASPPGRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLK 413 G GP G++ D+ V R G GLQ P P G + G ++ Sbjct: 1118 GAQGRRGPPGLFGQKGDDGV-----RGFVGVIGPPGLQGLPGPPGEKGEVGDVG---SMG 1169 Query: 414 SNWMSTTRTPRRSGASGPKMVADQTSGISRPPTAGIGTSRLCLGD 458 + R P+ G +G + G+ +P G R GD Sbjct: 1170 PHGAPGPRGPQ--GPTGSEGTPGLPGGVGQPGAVGEKGERGDAGD 1212 Score = 43.9 bits (102), Expect = 3e-04 Identities = 89/357 (24%), Positives = 113/357 (31%), Gaps = 70/357 (19%) Query: 73 SGDMGKYHAHGHLRAPVFPVAKGSVPSEG-RATPPLPHP-GDHHPRHRKNRGPSAGTSQL 130 SG+ G G FP KG V +G + P P P G+ P GP Q Sbjct: 718 SGNRGLQGEKGEKGEDGFPGFKGDVGLKGDQGKPGAPGPRGEDGPE-----GPKGQAGQA 772 Query: 131 GKKTQCRSLFLRTKGLCALLLELPPRPPPN-----------LQEGGQRAIFQRPPVYLGN 179 G++ S + K L P RP P + E G+ +P L Sbjct: 773 GEEGPPGSAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPIGEKGKSGKTGQPG--LEG 830 Query: 180 KPTPPRQEGSFG-----GRPKSQ--------PPLPQETAAPAPQ-----PGPTAPPARVR 221 + PP G G G+P + P +P E P Q PGP PP Sbjct: 831 ERGPPGSRGERGQPGATGQPGPKGDVGQDGAPGIPGEKGLPGLQGPPGFPGPKGPPGHQG 890 Query: 222 EPGRAEGASREPRLRSRAARPPPAP----GP-------GALSRASRSRAAGRPG----PG 266 + GR + L + PP P GP G L G PG PG Sbjct: 891 KDGRPGHPGQRGELGFQGQTGPPGPAGVLGPQGKTGEVGPLGERGPPGPPGPPGEQGLPG 950 Query: 267 FHGGEKAAAPRAPGGGGGRN--------PGALGRAAPPS----RARQDAWGLSGCATVGL 314 G E A P G G+ PG G P + + G G Sbjct: 951 LEGREGAKGELGPPGPLGKEGPAGLRGFPGPKGGPGDPGPTGLKGDKGPPGPVGANGSPG 1010 Query: 315 RRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGE-----GEGTHATHGPASPPG 366 RG AG P SG+ ++ RG G +G GP PPG Sbjct: 1011 ERGPLGPAGGIGLPGQSGSEGPVGPAGKKGSRGERGPPGPTGKDGIPGPLGPLGPPG 1067 Score = 40.0 bits (92), Expect = 0.005 Identities = 51/196 (26%), Positives = 65/196 (33%), Gaps = 27/196 (13%) Query: 184 PRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARV--REPGRAEGASREPRLRS--RA 239 P +GS G + + PP PA PGP R P G + +R Sbjct: 1084 PGHKGSKGDKGDAGPPGQPGIRGPAGHPGPPGADGAQGRRGPPGLFGQKGDDGVRGFVGV 1143 Query: 240 ARPPPAPG-PGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGG--------GGGRNPGAL 290 PP G PG G GP HG P+ P G GG PGA+ Sbjct: 1144 IGPPGLQGLPGPPGEKGEVGDVGSMGP--HGAPGPRGPQGPTGSEGTPGLPGGVGQPGAV 1201 Query: 291 GRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGG 350 G A G G + +GD G S P +G ++G G Sbjct: 1202 GEKGERGDAGDP--GPPGAPGIPGPKGDIGEKGDSGPSGAAG---------PPGKKGPPG 1250 Query: 351 EGEGTHATHGPASPPG 366 E +G + GP PG Sbjct: 1251 E-DGAKGSVGPTGLPG 1265 Score = 37.0 bits (84), Expect = 0.040 Identities = 59/243 (24%), Positives = 78/243 (32%), Gaps = 59/243 (24%) Query: 165 GQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPA-----R 219 G+ A+ ++ + G PP G G S PP P PGP P Sbjct: 379 GEPAVIEKGQQFEG----PPGAPGPQGVVGPSGPPGPPGFPGDPGPPGPAGLPGIPGIDG 434 Query: 220 VREPGR---------AEGASREPRLRSRAARPPPA---------PGPGALSRASRSRAAG 261 +R P A G+ + P + + A+ PG + R G Sbjct: 435 IRGPPGTVIMMPFQFAGGSFKGPPVSFQQAQAQAVLQQTQLSMKGPPGPVGLTGRPGPVG 494 Query: 262 RPG-PGFHGGEKAAAPRAPGGGGGRN--PGALGRAAPPS-------------RARQDAWG 305 PG PG G E A P+ P G G + PG +G+ P + + G Sbjct: 495 LPGHPGLKGEEGAEGPQGPRGLQGPHGPPGRVGKMGRPGADGARGLPGDTGPKGDRGFDG 554 Query: 306 LSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPP 365 L G +RGD G PP G RG EG G A P Sbjct: 555 LPGLPGEKGQRGDFGHVGQPGPPGEDG------------ERG----AEGPPGPTGQAGEP 598 Query: 366 GRR 368 G R Sbjct: 599 GPR 601 Score = 35.0 bits (79), Expect = 0.15 Identities = 44/159 (27%), Positives = 52/159 (32%), Gaps = 24/159 (15%) Query: 180 KPTPPRQEGSFG-----GRPKSQ-PPLPQETAAPAPQPGPTAPPARVREPGRAEGASREP 233 K PP ++G+ G G P PP + PG P V PG GAS EP Sbjct: 1245 KKGPPGEDGAKGSVGPTGLPGDLGPPGDPGVSGIDGSPGEKGDPGDVGGPG-PPGASGEP 1303 Query: 234 RLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRA 293 + P+ G R A G PGP G GR G +G Sbjct: 1304 GAPGPPGKRGPSGHMGREGREGEKGAKGEPGPD--------------GPPGRT-GPMGAR 1348 Query: 294 APPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSG 332 PP R + GL G G G PP G Sbjct: 1349 GPPGRVGPE--GLRGIPGPVGEPGLLGAPGQMGPPGPLG 1385 Score = 34.3 bits (77), Expect = 0.26 Identities = 49/182 (26%), Positives = 64/182 (35%), Gaps = 37/182 (20%) Query: 70 PKRSGDMGKYHAHGH-----LRAPVFPVAK-GSVPSEGRATPPLPHPGDHHPRHRKNRGP 123 P R+G MG G LR PV + G + + G+ PP P P + + GP Sbjct: 1339 PGRTGPMGARGPPGRVGPEGLRGIPGPVGEPGLLGAPGQMGPPGPLGPSGLPGLKGDTGP 1398 Query: 124 SAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAI--FQRPPVYLGNKP 181 +G L L+ PP E G + + Q PP G+ P Sbjct: 1399 KGEKGHIG--------------LIGLI-----GPPGEAGEKGDQGLPGVQGPPGPKGD-P 1438 Query: 182 TPPRQEGSFG--GRPKSQPPLPQETAAPAP-------QPGPTAPPARVREPGRAEGASRE 232 PP GS G G P PL Q+ + +P GP PP P G R Sbjct: 1439 GPPGPIGSLGHPGPPGVAGPLGQKGSKGSPGSMGPRGDTGPAGPPGPPGAPAELHGLRRR 1498 Query: 233 PR 234 R Sbjct: 1499 RR 1500 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.316 0.135 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,847,847 Number of Sequences: 37866 Number of extensions: 1994839 Number of successful extensions: 27871 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 398 Number of HSP's successfully gapped in prelim test: 2246 Number of HSP's that attempted gapping in prelim test: 13925 Number of HSP's gapped (non-prelim): 9923 length of query: 480 length of database: 18,247,518 effective HSP length: 106 effective length of query: 374 effective length of database: 14,233,722 effective search space: 5323412028 effective search space used: 5323412028 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.