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Search of human proteins with 239752259
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens]
(317 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens] 652 0.0
gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens] 644 0.0
gi|239746769 PREDICTED: similar to Serine/threonine-protein kina... 618 e-177
gi|239757749 PREDICTED: hypothetical protein [Homo sapiens] 526 e-149
gi|153251840 zinc finger protein 839 [Homo sapiens] 142 5e-34
gi|4826948 protein kinase, X-linked [Homo sapiens] 73 4e-13
gi|19111150 angiomotin isoform 2 [Homo sapiens] 52 5e-07
gi|166064029 angiomotin isoform 1 [Homo sapiens] 52 5e-07
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ... 48 1e-05
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 47 3e-05
gi|58218966 hypothetical protein LOC339201 [Homo sapiens] 46 5e-05
gi|239753883 PREDICTED: hypothetical protein [Homo sapiens] 45 6e-05
gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo ... 45 6e-05
gi|239742378 PREDICTED: hypothetical protein XP_002342507 [Homo ... 45 6e-05
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 45 8e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 45 8e-05
gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens] 45 8e-05
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 45 1e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 45 1e-04
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo sapi... 44 1e-04
gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo sapi... 44 1e-04
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 44 1e-04
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 44 1e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 2e-04
gi|6466466 RAN binding protein 3 isoform RANBP3-d [Homo sapiens] 44 2e-04
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 44 2e-04
gi|18079216 CASK interacting protein 1 [Homo sapiens] 44 2e-04
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 44 2e-04
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 44 2e-04
>gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens]
Length = 317
Score = 652 bits (1683), Expect = 0.0
Identities = 317/317 (100%), Positives = 317/317 (100%)
Query: 1 MGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG 60
MGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG
Sbjct: 1 MGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG 60
Query: 61 PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA 120
PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA
Sbjct: 61 PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA 120
Query: 121 PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC 180
PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC
Sbjct: 121 PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC 180
Query: 181 VPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLEAICVKV 240
VPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLEAICVKV
Sbjct: 181 VPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLEAICVKV 240
Query: 241 TSGETKGQEWPTSLLATVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQPLVRTEPQSCF 300
TSGETKGQEWPTSLLATVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQPLVRTEPQSCF
Sbjct: 241 TSGETKGQEWPTSLLATVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQPLVRTEPQSCF 300
Query: 301 LHQPPAQGFVQRPLPAL 317
LHQPPAQGFVQRPLPAL
Sbjct: 301 LHQPPAQGFVQRPLPAL 317
>gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens]
Length = 317
Score = 644 bits (1661), Expect = 0.0
Identities = 314/317 (99%), Positives = 315/317 (99%)
Query: 1 MGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG 60
MGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG
Sbjct: 1 MGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG 60
Query: 61 PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA 120
PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA
Sbjct: 61 PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA 120
Query: 121 PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC 180
PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC
Sbjct: 121 PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC 180
Query: 181 VPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLEAICVKV 240
VPMKAPGLAQAAVAEETPDWAPELCPS E+RSPEPPANRLQDFDTLVTVGKQLEAICVKV
Sbjct: 181 VPMKAPGLAQAAVAEETPDWAPELCPSPESRSPEPPANRLQDFDTLVTVGKQLEAICVKV 240
Query: 241 TSGETKGQEWPTSLLATVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQPLVRTEPQSCF 300
TSGETKGQE PTSLLATVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQPLVRTEPQSCF
Sbjct: 241 TSGETKGQERPTSLLATVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQPLVRTEPQSCF 300
Query: 301 LHQPPAQGFVQRPLPAL 317
LHQPPAQGFVQRPLPAL
Sbjct: 301 LHQPPAQGFVQRPLPAL 317
>gi|239746769 PREDICTED: similar to Serine/threonine-protein kinase
PRKX (Protein kinase PKX1) [Homo sapiens]
Length = 330
Score = 618 bits (1593), Expect = e-177
Identities = 301/301 (100%), Positives = 301/301 (100%)
Query: 17 GGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARAAAPAFPA 76
GGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARAAAPAFPA
Sbjct: 30 GGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARAAAPAFPA 89
Query: 77 ASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAG 136
ASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAG
Sbjct: 90 ASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAG 149
Query: 137 WPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEE 196
WPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEE
Sbjct: 150 WPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEE 209
Query: 197 TPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLEAICVKVTSGETKGQEWPTSLLA 256
TPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLEAICVKVTSGETKGQEWPTSLLA
Sbjct: 210 TPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLEAICVKVTSGETKGQEWPTSLLA 269
Query: 257 TVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQPLVRTEPQSCFLHQPPAQGFVQRPLPA 316
TVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQPLVRTEPQSCFLHQPPAQGFVQRPLPA
Sbjct: 270 TVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQPLVRTEPQSCFLHQPPAQGFVQRPLPA 329
Query: 317 L 317
L
Sbjct: 330 L 330
>gi|239757749 PREDICTED: hypothetical protein [Homo sapiens]
Length = 264
Score = 526 bits (1355), Expect = e-149
Identities = 256/258 (99%), Positives = 257/258 (99%)
Query: 1 MGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG 60
+GSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG
Sbjct: 7 VGSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQG 66
Query: 61 PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA 120
PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA
Sbjct: 67 PRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARA 126
Query: 121 PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC 180
PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC
Sbjct: 127 PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPEC 186
Query: 181 VPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLEAICVKV 240
VPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLEAICVKV
Sbjct: 187 VPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLEAICVKV 246
Query: 241 TSGETKGQEWPTSLLATV 258
TSGETKGQE PTSLLATV
Sbjct: 247 TSGETKGQERPTSLLATV 264
>gi|153251840 zinc finger protein 839 [Homo sapiens]
Length = 927
Score = 142 bits (357), Expect = 5e-34
Identities = 73/90 (81%), Positives = 78/90 (86%), Gaps = 3/90 (3%)
Query: 231 KQLEAICVKVTSGETKGQEWPTSLLATVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQP 290
+QLEAICVKVTSGETKGQE P L T+QPQ+AR+SQ PRGNS LVGLH+ SPQLLRVQP
Sbjct: 96 QQLEAICVKVTSGETKGQERPMLLPTTIQPQTARKSQLPRGNSCLVGLHIASPQLLRVQP 155
Query: 291 LVRTEPQSCFLH---QPPAQGFVQRPLPAL 317
LVRTEPQSCFL QPPAQGFVQRPLPAL
Sbjct: 156 LVRTEPQSCFLSDLCQPPAQGFVQRPLPAL 185
>gi|4826948 protein kinase, X-linked [Homo sapiens]
Length = 358
Score = 72.8 bits (177), Expect = 4e-13
Identities = 39/56 (69%), Positives = 40/56 (71%), Gaps = 8/56 (14%)
Query: 183 MKAPGLAQAA--------VAEETPDWAPELCPSSEARSPEPPANRLQDFDTLVTVG 230
M+APGLAQAA VAEETPD AP LCPS EA SPEPP LQDFDTL TVG
Sbjct: 1 MEAPGLAQAAAAESDSRKVAEETPDGAPALCPSPEALSPEPPVYSLQDFDTLATVG 56
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 52.4 bits (124), Expect = 5e-07
Identities = 60/204 (29%), Positives = 80/204 (39%), Gaps = 18/204 (8%)
Query: 17 GGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGP---RLALQARAAAPA 73
G RA+ P P P P P + G R T +G + A A + PA
Sbjct: 421 GDYRAEYVPSTPSPVP----PSTPLLSAHSKTGSRDCSTQTERGTESNKTAAVAPISVPA 476
Query: 74 FPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAG 133
AA+ + + VAA V+ +P AA AP A A+ A
Sbjct: 477 PVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPA------AAAAPSPATAAATAAAV 530
Query: 134 WAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAV 193
Q A AS A AP + AA+A P + PA P P VP+ AP AQA+
Sbjct: 531 SPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAP--AAPAPVPAPALVPVPAPAAAQASA 588
Query: 194 AEET--PDWAPELCPSSEARSPEP 215
+T P AP + P + A +P P
Sbjct: 589 PAQTQAPTSAPAVAP-TPAPTPTP 611
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 52.4 bits (124), Expect = 5e-07
Identities = 60/204 (29%), Positives = 80/204 (39%), Gaps = 18/204 (8%)
Query: 17 GGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGP---RLALQARAAAPA 73
G RA+ P P P P P + G R T +G + A A + PA
Sbjct: 830 GDYRAEYVPSTPSPVP----PSTPLLSAHSKTGSRDCSTQTERGTESNKTAAVAPISVPA 885
Query: 74 FPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAG 133
AA+ + + VAA V+ +P AA AP A A+ A
Sbjct: 886 PVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPA------AAAAPSPATAAATAAAV 939
Query: 134 WAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAV 193
Q A AS A AP + AA+A P + PA P P VP+ AP AQA+
Sbjct: 940 SPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAP--AAPAPVPAPALVPVPAPAAAQASA 997
Query: 194 AEET--PDWAPELCPSSEARSPEP 215
+T P AP + P + A +P P
Sbjct: 998 PAQTQAPTSAPAVAP-TPAPTPTP 1020
>gi|112821681 G protein-regulated inducer of neurite outgrowth 1
[Homo sapiens]
Length = 1008
Score = 47.8 bits (112), Expect = 1e-05
Identities = 76/280 (27%), Positives = 111/280 (39%), Gaps = 39/280 (13%)
Query: 2 GSYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGP 61
GS S+E + E G ++ P PR G P + A GG+G + +
Sbjct: 470 GSRKTSSEKVNPESSGKTNPVSSGPGD-PRSLGTAGPPSAVKAEPATGGKGDPLSSEKAG 528
Query: 62 RLA---LQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQ-PRPA 117
+A A+ A P A + P +G+ P +VS G+ +S P + P P+
Sbjct: 529 LVASGKAAPTASGKAEPLAVGKEDPVSKGKADAGPSGQGD-SVSIGKVVSTPGKTVPVPS 587
Query: 118 ARA-----------PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARL 166
+ PEG + S L G +A RA G A P AE +L
Sbjct: 588 GKVDPVSLGKAEAIPEGKVGSLPLEKGSPVTTTKADPRASGK-----AQPQSGGKAETKL 642
Query: 167 PERSGPARRPGPECVPMKAPGLAQA-AVAEETPDWAPELCPSSEARSPEPPANRLQDFDT 225
P + G A APG A A + +ETP + ++ P S R EP A+ +
Sbjct: 643 PGQEGAA-----------APGEAGAVCLKKETPQASEKVDPGS-CRKAEPLASGKGE--- 687
Query: 226 LVTVGKQLEAICVKVTSGETKGQEWPTSLLATVQPQSARQ 265
V++GK A K T + G+ P SL T S+RQ
Sbjct: 688 PVSLGKADSAPSRK-TESPSLGKVVPLSLEKTKPSSSSRQ 726
Score = 34.7 bits (78), Expect = 0.11
Identities = 54/236 (22%), Positives = 72/236 (30%), Gaps = 68/236 (28%)
Query: 9 EPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRA-----------------RCYRAAGGR 51
E AE+ A A PP PR R + P A C A
Sbjct: 769 EAAGAERSPCPEAAAPPPGPRTRDNFTKAPSWEASAPPPPREDAGTQAGAQACVSVAVSP 828
Query: 52 GRETGNAQGPRLALQARAAAPAFP------------AASRRSV-PAPRGRRLLLPGAVAA 98
A G + QA AP+ P AA RSV P + P A
Sbjct: 829 MSPQDGAGGSAFSFQAAPRAPSPPSRRDAGLQVSLGAAETRSVATGPMTPQAAAPPAFPE 888
Query: 99 CAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVD------- 151
V G L+ + P PA + + G+ W +GA+++
Sbjct: 889 VRVRPGSALAAAVAPPEPAEPVRDVSWDEKGM-----------TWEVYGAAMEVEVLGMA 937
Query: 152 ----------------AAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQA 191
A APP A + P RSG R P+ + PGL +A
Sbjct: 938 IQKHLERQIEEHGRQGAPAPPPAARAG----PGRSGSVRTAPPDGAAKRPPGLFRA 989
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 46.6 bits (109), Expect = 3e-05
Identities = 64/202 (31%), Positives = 73/202 (36%), Gaps = 29/202 (14%)
Query: 26 PAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPA- 84
PAPRP PG P RA+ R R T A P A R P
Sbjct: 921 PAPRPAPG----PAPFVPRERASVDRWRRTKGAGPP-------GGAGLADGFHRYYGPIE 969
Query: 85 PRGRRLLLPGAVAACAVSDGQPLSPPLRQP--RP------AARAPEGALASCGLRAGWAG 136
P+G L L A AA + G+PLSPP QP +P R E A G G+
Sbjct: 970 PQGLGLGLGEARAAPRGAAGRPLSPPAAQPPQKPPPSYFAIVRDKEPAEPPAGAFPGFPS 1029
Query: 137 --WPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAVA 194
PP AA A G + A E+ A AR P R PE P+ PG A
Sbjct: 1030 PPAPPAAAATAVGPPLCRLAFEDESPPAPARWP-------RSDPESQPLLGPGAGGAGGT 1082
Query: 195 EETPDWAPELCPSSEARSPEPP 216
AP P A P P
Sbjct: 1083 GGAGGGAPAAPPPCRAAPPPCP 1104
>gi|58218966 hypothetical protein LOC339201 [Homo sapiens]
Length = 193
Score = 45.8 bits (107), Expect = 5e-05
Identities = 48/152 (31%), Positives = 58/152 (38%), Gaps = 15/152 (9%)
Query: 60 GPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAAR 119
GP A Q AAP PA R+ + AP P A + A G P P R PR AA
Sbjct: 3 GPPSAPQGALAAPRSPAVRRKGLQAPSWGSPGRPAAHSPWAC--GPPHWGPQRGPRNAAA 60
Query: 120 APEG-----------ALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAA--SAEARL 166
A G A +C G PP A G + P + SA++R
Sbjct: 61 ARPGPRSRWHKRCAAACGACARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRP 120
Query: 167 PERSGPARRPGPECVPMKAPGLAQAAVAEETP 198
+GP RR P P APG A A +P
Sbjct: 121 GWCAGPRRRHAPGTEPHVAPGRAPPPRAGASP 152
Score = 34.7 bits (78), Expect = 0.11
Identities = 44/156 (28%), Positives = 52/156 (33%), Gaps = 35/156 (22%)
Query: 5 PWSAEPTD-AEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGN------ 57
PW+ P +RG A A P PR R RC A G R G+
Sbjct: 41 PWACGPPHWGPQRGPRNAAAARPGPRSR--------WHKRCAAACGACARPPGHQLQPPG 92
Query: 58 --AQGPRLALQARAAAPAFPAASRRSVPA----PRGRRLLLPGAVAACAVSDGQPLSPPL 111
A P +A P S +S P PR R PG +P P
Sbjct: 93 AGAPQPGVACSYLGPRPQRTPCSAQSRPGWCAGPRRRHA--PGT---------EPHVAPG 141
Query: 112 RQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWG 147
R P P A A G+ G + P A WR WG
Sbjct: 142 RAPPPRAGASPGSRLLPGSPSLLL---PAATWRTWG 174
>gi|239753883 PREDICTED: hypothetical protein [Homo sapiens]
Length = 296
Score = 45.4 bits (106), Expect = 6e-05
Identities = 58/181 (32%), Positives = 69/181 (38%), Gaps = 18/181 (9%)
Query: 44 CYRAAG-GRGRETGNAQGPR---LALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAAC 99
CY G RGR+ G+ PR Q A + A AA+ R A R RR LL A
Sbjct: 64 CYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGR---AQRVRRGLLRWRTTAL 120
Query: 100 AVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEA 159
P P LR+PR L + G RA G + R AS+D A +
Sbjct: 121 G-----PARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGP 175
Query: 160 ASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANR 219
AR R RPG VP PG AA +ET A E SP A R
Sbjct: 176 EDLAARASTRRPRGFRPGLP-VPTAPPGGLAAAAKDETSCAARE-----RGASPRGDAGR 229
Query: 220 L 220
+
Sbjct: 230 V 230
>gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo
sapiens]
Length = 296
Score = 45.4 bits (106), Expect = 6e-05
Identities = 58/181 (32%), Positives = 69/181 (38%), Gaps = 18/181 (9%)
Query: 44 CYRAAG-GRGRETGNAQGPR---LALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAAC 99
CY G RGR+ G+ PR Q A + A AA+ R A R RR LL A
Sbjct: 64 CYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGR---AQRVRRGLLRWRTTAL 120
Query: 100 AVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEA 159
P P LR+PR L + G RA G + R AS+D A +
Sbjct: 121 G-----PARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGP 175
Query: 160 ASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANR 219
AR R RPG VP PG AA +ET A E SP A R
Sbjct: 176 EDLAARASTRRPRGFRPGLP-VPTAPPGGLAAAAKDETSCAARE-----RGASPRGDAGR 229
Query: 220 L 220
+
Sbjct: 230 V 230
>gi|239742378 PREDICTED: hypothetical protein XP_002342507 [Homo
sapiens]
Length = 296
Score = 45.4 bits (106), Expect = 6e-05
Identities = 58/181 (32%), Positives = 69/181 (38%), Gaps = 18/181 (9%)
Query: 44 CYRAAG-GRGRETGNAQGPR---LALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAAC 99
CY G RGR+ G+ PR Q A + A AA+ R A R RR LL A
Sbjct: 64 CYAVPGVRRGRQAGDLSPPRPGSARTQLVATSAAQAAAAGR---AQRVRRGLLRWRTTAL 120
Query: 100 AVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEA 159
P P LR+PR L + G RA G + R AS+D A +
Sbjct: 121 G-----PARPRLRRPRHRLPGGSRRLPAPGPRAPAPGKGRERELRTGAASIDRAPARTGP 175
Query: 160 ASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANR 219
AR R RPG VP PG AA +ET A E SP A R
Sbjct: 176 EDLAARASTRRPRGFRPGLP-VPTAPPGGLAAAAKDETSCAARE-----RGASPRGDAGR 229
Query: 220 L 220
+
Sbjct: 230 V 230
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 45.1 bits (105), Expect = 8e-05
Identities = 56/179 (31%), Positives = 68/179 (37%), Gaps = 36/179 (20%)
Query: 25 PPAPRPRPGGFR-----PPLQR-ARCYRAAGGRGRETGNAQGPRLALQARAAAPAFPAAS 78
PPA R G R PP + R AA R G A+G ++ A A +A
Sbjct: 86 PPARASRAAGRRAGPAGPPCRAPGRGRAAATRRSPAPGTARGSPAGVERAGGATAASSAG 145
Query: 79 RRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAA--RAPEGALASCGLRAGWAG 136
RSVPA R LP ++ G S LR+P AA R+P + WA
Sbjct: 146 TRSVPARR-----LPPPCGGTSLGAG---SRALRRPGSAALPRSPSSS-------RRWAA 190
Query: 137 WPPQAAWR-----AWGASVDAAAPPSEAASAEARLPERSG-PA-------RRPGPECVP 182
P A R W AAPP+ AAS P +G PA P P C P
Sbjct: 191 MPGPGAPRPGAPGTWPVGFAVAAPPAAAASVAPPPPAVAGAPAAAFRGWVAAPDPGCTP 249
Score = 31.2 bits (69), Expect = 1.3
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 23/91 (25%)
Query: 108 SPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLP 167
SPP P +A + E A G +P ++A AWG PP+ A+ A R
Sbjct: 53 SPPTVAPAASAGSQEHPGAG-----GPLCFPARSA--AWG-------PPARASRAAGR-- 96
Query: 168 ERSGPARRPGPECVPMKAPGLAQAAVAEETP 198
R+GPA GP P +APG +AA +P
Sbjct: 97 -RAGPA---GP---PCRAPGRGRAAATRRSP 120
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 45.1 bits (105), Expect = 8e-05
Identities = 77/257 (29%), Positives = 92/257 (35%), Gaps = 61/257 (23%)
Query: 56 GNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPR 115
G A P A + AAPA PAA + P P P A A A G P PP P
Sbjct: 245 GAAAPPAPAAPSPPAAPA-PAAPAAAPPPP-------PPAPATLARPPGHPAGPPTAAPA 296
Query: 116 ---PAARAPEGALASCGLRAGWAGWP--------PQAAWRAWGASVDAAAPPS--EAASA 162
PAA G+ + A AG P P AA A V A +P +AA
Sbjct: 297 VPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPP 356
Query: 163 EARLPERSGPARR--------------PGPECVPMKAPGL-------AQAAVAEE----- 196
A+ SGPA P P VP APG A AV +
Sbjct: 357 AAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTP 416
Query: 197 ---TPDWAPELCPSSEA-RSPEPPAN--RLQDFDTLVTVGKQLEAICVKVTSGETKGQEW 250
T L P+ A R P+PP N +Q+F QL V V S +
Sbjct: 417 TATTSGIRATLTPTVLAPRLPQPPQNPTNIQNF--------QLPPGMVLVRSENGQLLMI 468
Query: 251 PTSLLATVQPQSARQSQ 267
P LA +Q Q+ Q Q
Sbjct: 469 PQQALAQMQAQAHAQPQ 485
Score = 44.7 bits (104), Expect = 1e-04
Identities = 53/172 (30%), Positives = 63/172 (36%), Gaps = 17/172 (9%)
Query: 47 AAGGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQP 106
AAG G + P A A AAPA A P P GR PG P
Sbjct: 54 AAGALGNHVVSGS-PAGAAGAGPAAPAEGAPGAAPEPPPAGRAR--PGGGGPQRPGPPSP 110
Query: 107 LSP--PLRQPRPAARA---PEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAAS 161
P P PAA+ PEG+ SC P AA A A P++ A
Sbjct: 111 RRPLVPAGPAPPAAKLRPPPEGSAGSCA--------PVPAAAAVAAGPEPAPAGPAKPAG 162
Query: 162 AEARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEARSP 213
A L R+GP PGP P PG A +T + + L S A +P
Sbjct: 163 PAA-LAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAP 213
Score = 42.4 bits (98), Expect = 5e-04
Identities = 66/236 (27%), Positives = 82/236 (34%), Gaps = 40/236 (16%)
Query: 1 MGSYPWSAEPTDAEKRGGAR--------AKATPPAPRPRPGGFRPPLQRARCYRAAGGRG 52
+G++ S P A G A A PPA R RP GG G
Sbjct: 58 LGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARP----------------GGGG 101
Query: 53 RETGNAQGPRLALQARAAAPAFPAASRRSVP-APRGRRLLLPGAVAACAVSDGQPLSP-- 109
+ PR L A PA PAA R P G +P A A A + P P
Sbjct: 102 PQRPGPPSPRRPLV--PAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAK 159
Query: 110 PLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPER 169
P AARA G G G P A + AA S A+A A
Sbjct: 160 PAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVN 219
Query: 170 SGPAR-----RPGPECVPMKAPGLAQAAV----AEETPDWAPELCPSSEARSPEPP 216
+GPA +P ++ P AA A +P AP P++ A +P PP
Sbjct: 220 NGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAP--APAAPAAAPPPP 273
Score = 35.4 bits (80), Expect = 0.067
Identities = 67/256 (26%), Positives = 79/256 (30%), Gaps = 56/256 (21%)
Query: 2 GSYPWSAEPTDAEKRGGARAKATP-----PAPRPRPGGFRPPLQRARCYRAAGGRGRETG 56
G P A P A+A P P P P PG +P AG +T
Sbjct: 149 GPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKP----------AGPGAAQTL 198
Query: 57 NAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRP 116
N L AAAPA + L LP A V P P P
Sbjct: 199 NGSAALLNSH-HAAAPAVSLVNNGPAAL-----LPLPKPAAPGTVIQTPPFVGAAAPPAP 252
Query: 117 AARAPEGALASCGLRA----------------GWAGWPPQA-------AWRAWGASVDAA 153
AA +P A A A G PP A A G S AA
Sbjct: 253 AAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAA 312
Query: 154 APPSEAASAEARLPERSGP-----ARRPG-----PECVPMKAPGLAQAAVAEETPDWAPE 203
P+ AA A + + GP A PG P+ V AP AQ A A
Sbjct: 313 PAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAAS 372
Query: 204 LC--PSSEARSPEPPA 217
+ P+ + P P A
Sbjct: 373 MVIGPTMQGALPSPAA 388
>gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens]
Length = 562
Score = 45.1 bits (105), Expect = 8e-05
Identities = 63/208 (30%), Positives = 81/208 (38%), Gaps = 23/208 (11%)
Query: 4 YPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRG--------RET 55
+P SA E A A A+ P P P P PP R R+AGG RE
Sbjct: 54 HPESAGEHALEPPAPAGASASTPPP-PAPEAQLPPFPRELAGRSAGGSSPEGGEDSDRED 112
Query: 56 GNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPR 115
GN P + + ++ FP + +S G RL P + A S G P P Q R
Sbjct: 113 GN-YCPPVKRERTSSLTQFPPS--QSEERSSGFRLKPPTLIHGQAPSAGLPSQKPKEQQR 169
Query: 116 PAAR-----APE-GALASCGLRAGWAG--WPPQAAWRAWGASVDAAA--PPSEAASAEAR 165
R AP+ AL+ +G G P AS D AA PSEAA E +
Sbjct: 170 SVLRPAVLQAPQPKALSQTVPSSGTNGVSLPADCTGAVPAASPDTAAWRSPSEAAD-EEK 228
Query: 166 LPERSGPARRPGPECVPMKAPGLAQAAV 193
P+++ + E K P QA V
Sbjct: 229 EPQKNESSNASEEEACEKKDPATQQAFV 256
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 44.7 bits (104), Expect = 1e-04
Identities = 65/236 (27%), Positives = 81/236 (34%), Gaps = 37/236 (15%)
Query: 5 PWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLA 64
P S P AK T P P PG RA+G +G R++
Sbjct: 90 PASRPPASGRGERAPPAKNTSPGPVSSPG------------RASGTTRPGPLGQKGLRIS 137
Query: 65 LQ---ARAAAPAFPAASRRSVPAPRGRRLLLPGAVA--------ACAVSDGQPLSPPLRQ 113
+ AR A P S S A R PG + A G P P +
Sbjct: 138 AEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSAR 197
Query: 114 PRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEA---RLPERS 170
PRP P +++S + P AA R A P S + S+ A P RS
Sbjct: 198 PRPPTEGPRKSVSSASEHS--TTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARS 255
Query: 171 GPARRPGPEC----VPMKAPGLAQAAVAEETP---DWAPELCP--SSEARSPEPPA 217
GP+ R P K GL + TP D AP L P SS +P P A
Sbjct: 256 GPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSA 311
Score = 42.0 bits (97), Expect = 7e-04
Identities = 65/251 (25%), Positives = 86/251 (34%), Gaps = 62/251 (24%)
Query: 7 SAEPTDAEKRGGARAKATPPAP----RPRPGG---FRPPL---QRARCYRAAGGRGRETG 56
SA P + R G A+ TP AP +P+P G RPP R A G
Sbjct: 245 SATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPL 304
Query: 57 NAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQ--- 113
P ALQ++ A P PA S C ++ PL+PP
Sbjct: 305 ATPSPSAALQSQ-APPTLPATPHSS--------------SLTCQLATPLPLAPPSPSAPP 349
Query: 114 -----PRPAARAPEGALASCG---LRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEAR 165
P P A P A S G L+A + P A PP +A A A
Sbjct: 350 SLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPL-------SPLATPPPQAPPALAL 402
Query: 166 LPERSGPARRPGPECVPMKAPG----------LAQA---------AVAEETPDWAPELCP 206
P ++ P+ P P+ P L QA A +P +P + P
Sbjct: 403 PPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP 462
Query: 207 SSEARSPEPPA 217
S+ S PP+
Sbjct: 463 SATPPSQAPPS 473
Score = 37.0 bits (84), Expect = 0.023
Identities = 43/162 (26%), Positives = 59/162 (36%), Gaps = 37/162 (22%)
Query: 65 LQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGA 124
LQA + PA P S + P+P+ P A+A + P SPP P P +AP
Sbjct: 405 LQAPPSPPASPPLSPLATPSPQA-----PNALAVHLLQ--APFSPP---PSPPVQAPFSP 454
Query: 125 LASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMK 184
AS PP + +A PPS+A + A P + P+ P P
Sbjct: 455 PAS----------PPVSP---------SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSA 495
Query: 185 AP--------GLAQAAVAEETPDWAPELCPSSEARSPEPPAN 218
P +A+ P P L P PPA+
Sbjct: 496 TPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPAS 537
Score = 34.3 bits (77), Expect = 0.15
Identities = 65/229 (28%), Positives = 81/229 (35%), Gaps = 47/229 (20%)
Query: 23 ATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARAA-----APAFPAA 77
ATPP P P PPLQ A+ A A P AL + A AP P+A
Sbjct: 495 ATPPPQAPPPLA-APPLQLAKPPPQA-----PPALATPPLQALPSPPASFPGQAPFSPSA 548
Query: 78 SRR----SVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPR-PAARAPEGALASCGLRA 132
S + P P+ +L A V P SP L+ PR P P+ +++ L
Sbjct: 549 SLPMSPLATPPPQAPPVL---AAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTL 605
Query: 133 GWAGWPPQAAWRAWGASV---DAAAPPSEAASAEARL------PERSGPARRPGPE---- 179
A PP R+ +++ D A S A S L PE G A P P+
Sbjct: 606 ALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPE-GGAAASPPPDAELA 664
Query: 180 -CVPMK-----APGLAQAAVAEETPDWAPE--------LCPSSEARSPE 214
C P AP LA W P LC E PE
Sbjct: 665 ACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPE 713
Score = 31.6 bits (70), Expect = 0.97
Identities = 60/225 (26%), Positives = 75/225 (33%), Gaps = 37/225 (16%)
Query: 110 PLRQPRPAARAPEGALASCGLRAGWAGWPPQA--AWRAWGASVDAAAP---PSEAASAEA 164
P PRP AL G AG G P A A GA++ +AP P+ +A +
Sbjct: 29 PPGSPRPPPPVTPAALRVLGA-AGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSS 87
Query: 165 RLPERSGPARRPGPECVPMK--APGLAQAAVAEETPDWAPELCPSSEARSPEPPANRLQD 222
R P PA G P K +PG P +P + P
Sbjct: 88 RNPASRPPASGRGERAPPAKNTSPG----------PVSSPGRASGTTRPGPLGQKGLRIS 137
Query: 223 FDTLVTVGKQLEAICVKVTS-GETKGQEWPTSLLATVQPQSARQSQPPRGNSRLVGLHVT 281
+ V GK EA S G + PT T P AR+S R VGL
Sbjct: 138 AEETVARGKATEAPKRSALSAGARRDTSGPTP--GTPSPAMARRS---RAAGTEVGLPRP 192
Query: 282 SPQLLRVQPLV-------------RTEPQSCFLHQPPAQGFVQRP 313
+P P TEP +P A G +QRP
Sbjct: 193 APSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRP 237
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 44.7 bits (104), Expect = 1e-04
Identities = 64/238 (26%), Positives = 83/238 (34%), Gaps = 31/238 (13%)
Query: 3 SYPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPR 62
S P + + R + PPA PG P RA+G +G R
Sbjct: 73 SAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSP------GRASGTTRPGPLGQKGLR 126
Query: 63 LALQ---ARAAAPAFPAASRRSVPAPRGRRLLLPGAVA--------ACAVSDGQPLSPPL 111
++ + AR A P S S A R PG + A G P P
Sbjct: 127 ISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPS 186
Query: 112 RQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEA---RLPE 168
+PRP P +++S + P AA R A P S + S+ A P
Sbjct: 187 ARPRPPTEGPRKSVSSASEHS--TTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPA 244
Query: 169 RSGPARRPGPEC----VPMKAPGLAQAAVAEETP---DWAPELCP--SSEARSPEPPA 217
RSGP+ R P K GL + TP D AP L P SS +P P A
Sbjct: 245 RSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSA 302
Score = 38.1 bits (87), Expect = 0.010
Identities = 59/228 (25%), Positives = 80/228 (35%), Gaps = 46/228 (20%)
Query: 7 SAEPTDAEKRGGARAKATPPAP----RPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPR 62
SA P + R G A+ TP AP +P+P G LQ R P+
Sbjct: 236 SATPLSSPARSGPSARGTPRAPAHPSQPKPKG----LQALR----------------PPQ 275
Query: 63 LALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQP----RPAA 118
+ + AAPA S + P P A + P +PP + P
Sbjct: 276 VTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTL 335
Query: 119 RAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGP 178
+A L S L + A PPQ A A PP +A + P S P P P
Sbjct: 336 QATHSFLPSPPL-SPLATPPPQ-------APPALALPPLQAPPSPPASPPLS-PLATPSP 386
Query: 179 ECVPMKAPGLAQA---------AVAEETPDWAPELCPSSEARSPEPPA 217
+ A L QA A +P +P + PS+ S PP+
Sbjct: 387 QAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPS 434
Score = 37.0 bits (84), Expect = 0.023
Identities = 43/162 (26%), Positives = 59/162 (36%), Gaps = 37/162 (22%)
Query: 65 LQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGA 124
LQA + PA P S + P+P+ P A+A + P SPP P P +AP
Sbjct: 366 LQAPPSPPASPPLSPLATPSPQA-----PNALAVHLLQ--APFSPP---PSPPVQAPFSP 415
Query: 125 LASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMK 184
AS PP + +A PPS+A + A P + P+ P P
Sbjct: 416 PAS----------PPVSP---------SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSA 456
Query: 185 AP--------GLAQAAVAEETPDWAPELCPSSEARSPEPPAN 218
P +A+ P P L P PPA+
Sbjct: 457 TPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPAS 498
Score = 34.3 bits (77), Expect = 0.15
Identities = 65/229 (28%), Positives = 81/229 (35%), Gaps = 47/229 (20%)
Query: 23 ATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARAA-----APAFPAA 77
ATPP P P PPLQ A+ A A P AL + A AP P+A
Sbjct: 456 ATPPPQAPPPLA-APPLQLAKPPPQA-----PPALATPPLQALPSPPASFPGQAPFSPSA 509
Query: 78 SRR----SVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPR-PAARAPEGALASCGLRA 132
S + P P+ +L A V P SP L+ PR P P+ +++ L
Sbjct: 510 SLPMSPLATPPPQAPPVL---AAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTL 566
Query: 133 GWAGWPPQAAWRAWGASV---DAAAPPSEAASAEARL------PERSGPARRPGPE---- 179
A PP R+ +++ D A S A S L PE G A P P+
Sbjct: 567 ALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPE-GGAAASPPPDAELA 625
Query: 180 -CVPMK-----APGLAQAAVAEETPDWAPE--------LCPSSEARSPE 214
C P AP LA W P LC E PE
Sbjct: 626 ACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPE 674
>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 44.7 bits (104), Expect = 1e-04
Identities = 54/181 (29%), Positives = 65/181 (35%), Gaps = 52/181 (28%)
Query: 6 WSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLAL 65
W E R G AT RP PG R +AR R G R R A+GPR A
Sbjct: 25 WGGEEVQGLARAGL---ATGKGQRP-PGPGRVRAAQARARRGGGARERPAEGARGPRAAR 80
Query: 66 QARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQP----RPAARAP 121
AAP P++ APRG P P LR+P RP A+AP
Sbjct: 81 GGARAAP-MPSS------APRG------------------PTEPALRRPSSAERPLAQAP 115
Query: 122 EGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECV 181
+ AS G G A A PS ++ A + R G RR +
Sbjct: 116 SSS-ASVGRAPG------------------AMASPSRSSEATGKPRGRDGRPRREEDDVP 156
Query: 182 P 182
P
Sbjct: 157 P 157
Score = 31.2 bits (69), Expect = 1.3
Identities = 30/94 (31%), Positives = 36/94 (38%), Gaps = 14/94 (14%)
Query: 129 GLRAGWAGWPPQAAWRAWGASVDAAAP--PSEAASAEARLPERSGPARRPGPEC-VPMKA 185
G++ GW G Q RA A+ P P +A+AR G RP P A
Sbjct: 20 GVQPGWGGEEVQGLARAGLATGKGQRPPGPGRVRAAQARARRGGGARERPAEGARGPRAA 79
Query: 186 PGLAQAAVAEETPDWAPELCPSSEARSPEPPANR 219
G A+AA PSS R P PA R
Sbjct: 80 RGGARAAP-----------MPSSAPRGPTEPALR 102
>gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 44.3 bits (103), Expect = 1e-04
Identities = 67/258 (25%), Positives = 87/258 (33%), Gaps = 49/258 (18%)
Query: 5 PWSAEPTDAEKRGGARAKATP---------PAPRPRPGGFRPPLQRARCYRA-------- 47
P A P +R G+R + TP P PRP PP R+R Y
Sbjct: 302 PRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASS 361
Query: 48 -----AGGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPAPR--GRRLLLPGAVAACA 100
G R +TG GPR +R PA+ RR PA R R L G
Sbjct: 362 AQSGPLGTRSDDTGT--GPRRERPSRRLTTGTPASPRRP-PALRSQSRDRLDRGRPRGAP 418
Query: 101 VSDGQPLS--PPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSE 158
G LS P R+ R +R + L R G W P+ + G+ P
Sbjct: 419 GGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGR-GSGGSGRSTPQTPRA 477
Query: 159 AASAEARLPERSGPARRPG--PECV-----------------PMKAPGLAQAAVAEETPD 199
+ A RL S P+ G P + ++ LA A E
Sbjct: 478 RSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALEAVAS 537
Query: 200 WAPELCPSSEARSPEPPA 217
P AR+P+PPA
Sbjct: 538 VTPTGPAPDPARAPDPPA 555
Score = 33.9 bits (76), Expect = 0.20
Identities = 53/207 (25%), Positives = 69/207 (33%), Gaps = 43/207 (20%)
Query: 46 RAAGGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPAPR------------------- 86
R +GG GR T Q PR A +PA P SR S P+P
Sbjct: 462 RGSGGSGRST--PQTPR------ARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQ 513
Query: 87 ----GRRL---LLPGAVAACAVSDGQPLSP---PLRQPRPAAR-----APEGALASCGLR 131
RRL L A A AV+ P P P R P P A + + +S +
Sbjct: 514 EQQLFRRLEEEFLANARALEAVASVTPTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVL 573
Query: 132 AGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQA 191
G G P + A G + S ++ + P GP PG +
Sbjct: 574 GGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWAR 633
Query: 192 AVAEETPDWAPELCPSSEA-RSPEPPA 217
+ PD P P+ R P PA
Sbjct: 634 GRMDTQPDRKPSRIPTPRGPRRPSGPA 660
>gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 44.3 bits (103), Expect = 1e-04
Identities = 67/258 (25%), Positives = 87/258 (33%), Gaps = 49/258 (18%)
Query: 5 PWSAEPTDAEKRGGARAKATP---------PAPRPRPGGFRPPLQRARCYRA-------- 47
P A P +R G+R + TP P PRP PP R+R Y
Sbjct: 302 PRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASS 361
Query: 48 -----AGGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPAPR--GRRLLLPGAVAACA 100
G R +TG GPR +R PA+ RR PA R R L G
Sbjct: 362 AQSGPLGTRSDDTGT--GPRRERPSRRLTTGTPASPRRP-PALRSQSRDRLDRGRPRGAP 418
Query: 101 VSDGQPLS--PPLRQPRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSE 158
G LS P R+ R +R + L R G W P+ + G+ P
Sbjct: 419 GGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGR-GSGGSGRSTPQTPRA 477
Query: 159 AASAEARLPERSGPARRPG--PECV-----------------PMKAPGLAQAAVAEETPD 199
+ A RL S P+ G P + ++ LA A E
Sbjct: 478 RSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALEAVAS 537
Query: 200 WAPELCPSSEARSPEPPA 217
P AR+P+PPA
Sbjct: 538 VTPTGPAPDPARAPDPPA 555
Score = 33.9 bits (76), Expect = 0.20
Identities = 53/207 (25%), Positives = 69/207 (33%), Gaps = 43/207 (20%)
Query: 46 RAAGGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPAPR------------------- 86
R +GG GR T Q PR A +PA P SR S P+P
Sbjct: 462 RGSGGSGRST--PQTPR------ARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQ 513
Query: 87 ----GRRL---LLPGAVAACAVSDGQPLSP---PLRQPRPAAR-----APEGALASCGLR 131
RRL L A A AV+ P P P R P P A + + +S +
Sbjct: 514 EQQLFRRLEEEFLANARALEAVASVTPTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVL 573
Query: 132 AGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQA 191
G G P + A G + S ++ + P GP PG +
Sbjct: 574 GGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWAR 633
Query: 192 AVAEETPDWAPELCPSSEA-RSPEPPA 217
+ PD P P+ R P PA
Sbjct: 634 GRMDTQPDRKPSRIPTPRGPRRPSGPA 660
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 44.3 bits (103), Expect = 1e-04
Identities = 58/219 (26%), Positives = 85/219 (38%), Gaps = 26/219 (11%)
Query: 8 AEPTDAEKRGGARAKATPPAP-RPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQ 66
+ P+ + A A TPPA + P P + R RAAGG GR + R + +
Sbjct: 339 SSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRS-R 397
Query: 67 ARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALA 126
+ A+AP R PRG L A ++ G+ P P P + G
Sbjct: 398 SSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGP--GPEPGSERGHG--- 452
Query: 127 SCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGP---ECVPM 183
G RA PP+A A+ PS A PE +R PGP
Sbjct: 453 GHGKRA--KERPPRAR--------PASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSS 502
Query: 184 KAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANRLQD 222
++P +++ AE+ P S + SP+ P +R +D
Sbjct: 503 RSPSKSRSRSAEKRPH------SPSRSPSPKKPLSRDKD 535
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 44.3 bits (103), Expect = 1e-04
Identities = 45/118 (38%), Positives = 52/118 (44%), Gaps = 20/118 (16%)
Query: 107 LSPPLRQPRPAA--RAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPS--EAASA 162
+ PP R P A RAP GA A+ A A PP A A V AAAP AA+A
Sbjct: 99 VQPPRRGATPPAPPRAPRGAPAA----AAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAA 154
Query: 163 EARLPERSGPARRPGPEC---VPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPA 217
A P GPA+ PGP P+ AP A AA P + P + R PPA
Sbjct: 155 AATAPPSPGPAQ-PGPRAQRAAPLAAPPPAPAA--------PPAVAPPAGPRRAPPPA 203
Score = 43.9 bits (102), Expect = 2e-04
Identities = 51/167 (30%), Positives = 60/167 (35%), Gaps = 36/167 (21%)
Query: 53 RETGNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLR 112
R Q PR R A P P + R PA AA A P PP
Sbjct: 94 RNAARVQPPR-----RGATPPAPPRAPRGAPA-----------AAAAAAPPPTPAPPPPP 137
Query: 113 QPRPAA---RAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPER 169
P AA RAP A A+ A + P Q RA A+ AA PP+ AA P
Sbjct: 138 APVAAAAPARAPRAAAAAA--TAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPP-- 193
Query: 170 SGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPP 216
+GP R P P AVA P P P + + +PP
Sbjct: 194 AGPRRAPPP-------------AVAAREPPLPPPPQPPAPPQQQQPP 227
Score = 42.7 bits (99), Expect = 4e-04
Identities = 44/138 (31%), Positives = 52/138 (37%), Gaps = 9/138 (6%)
Query: 10 PTDAEKRGGARAKATPPAPRPRPG------GFRPPLQRARCYRAAGGRGRETGNAQ-GPR 62
P A + A A A P P P P P + R AA G AQ GPR
Sbjct: 111 PPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPR 170
Query: 63 LALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPL--RQPRPAARA 120
A AAP A+ +V P G R P AVAA P PP +Q +P
Sbjct: 171 AQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQ 230
Query: 121 PEGALASCGLRAGWAGWP 138
P+ +RAG A P
Sbjct: 231 PQPPPEGGAVRAGGAARP 248
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 43.9 bits (102), Expect = 2e-04
Identities = 64/238 (26%), Positives = 81/238 (34%), Gaps = 37/238 (15%)
Query: 5 PWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLA 64
P S P AK T P P PG RA+G +G R++
Sbjct: 90 PASRPPASGRGERAPPAKNTSPGPVSSPG------------RASGTTRPGPLGQKGLRIS 137
Query: 65 LQ---ARAAAPAFPAASRRSVPAPRGRRLLLPGAVA--------ACAVSDGQPLSPPLRQ 113
+ AR A P S S A R PG + A G P P +
Sbjct: 138 AEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSAR 197
Query: 114 PRPAARAPEGALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEA---RLPERS 170
PRP P +++S + P AA R A P S + S+ A P RS
Sbjct: 198 PRPPTEGPRKSVSSASEHS--TTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARS 255
Query: 171 GPARRPGPEC----VPMKAPGLAQAAVAEETP---DWAPELCP--SSEARSPEPPANR 219
GP+ R P K GL + TP D AP L P SS +P P +
Sbjct: 256 GPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTK 313
Score = 40.0 bits (92), Expect = 0.003
Identities = 53/202 (26%), Positives = 71/202 (35%), Gaps = 27/202 (13%)
Query: 7 SAEPTDAEKRGGARAKATPPAP----RPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPR 62
SA P + R G A+ TP AP +P+P G LQ R + R ++ A GP
Sbjct: 245 SATPLSSPARSGPSARGTPRAPAHPSQPKPKG----LQALRPPQVTPPR-KDAAPALGP- 298
Query: 63 LALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPE 122
+ A P+ R VP P LP + P SPPL P P A
Sbjct: 299 -LSSSPLATPSPSGTKARPVPPPDNAATPLPATL---------PPSPPLATPLPLAPPSP 348
Query: 123 GALASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVP 182
A S PP A PP +A + +P P P
Sbjct: 349 SAPPSLQTLPSPPATPPSQ------APPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQA 402
Query: 183 MKAPGLAQAAVAEETPDWAPEL 204
+P LA +++ T +P L
Sbjct: 403 PPSP-LALSSLQATTSLGSPTL 423
Score = 37.4 bits (85), Expect = 0.018
Identities = 58/201 (28%), Positives = 75/201 (37%), Gaps = 41/201 (20%)
Query: 23 ATPPAPRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLA----LQARAAAPAFPAAS 78
ATPP P+ P PPLQ + T Q P LQA + PA P S
Sbjct: 588 ATPP-PQAPPALASPPLQGLPSPPLSP---LATPPPQAPPXLALPPLQAPPSPPASPPLS 643
Query: 79 RRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWP 138
+ P+P+ P A+A + P SPP P P +AP AS P
Sbjct: 644 PLATPSPQA-----PNALAVHLLQ--APFSPP---PSPPVQAPFSPPAS----------P 683
Query: 139 PQAAWRAWGASVDAAAPPSEAASAEARLPER---SGPARRP-GPECVPMKAPGLAQAAVA 194
P + +A PPS+A + A P + S PA P P P AA
Sbjct: 684 PVSP---------SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPP 734
Query: 195 EETPDWAPELCPSSEARSPEP 215
+ P P P S + +P P
Sbjct: 735 LQVPPSPPASPPMSPSATPPP 755
Score = 33.5 bits (75), Expect = 0.25
Identities = 40/150 (26%), Positives = 49/150 (32%), Gaps = 7/150 (4%)
Query: 65 LQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGA 124
LQ + PA P P G + G A++ G P PP R P P+ A
Sbjct: 840 LQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPP-PPPSRSPSSTLSGPDLA 898
Query: 125 LASCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMK 184
G + P + G AAA P A A P + +R P P
Sbjct: 899 ----GHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHP--AAWSRGPAPPLAFRG 952
Query: 185 APGLAQAAVAEETPDWAPELCPSSEARSPE 214
APG P A LC E PE
Sbjct: 953 APGAPLPWPPATGPGSADGLCTIYETEGPE 982
Score = 31.6 bits (70), Expect = 0.97
Identities = 60/225 (26%), Positives = 75/225 (33%), Gaps = 37/225 (16%)
Query: 110 PLRQPRPAARAPEGALASCGLRAGWAGWPPQA--AWRAWGASVDAAAP---PSEAASAEA 164
P PRP AL G AG G P A A GA++ +AP P+ +A +
Sbjct: 29 PPGSPRPPPPVTPAALRVLGA-AGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSS 87
Query: 165 RLPERSGPARRPGPECVPMK--APGLAQAAVAEETPDWAPELCPSSEARSPEPPANRLQD 222
R P PA G P K +PG P +P + P
Sbjct: 88 RNPASRPPASGRGERAPPAKNTSPG----------PVSSPGRASGTTRPGPLGQKGLRIS 137
Query: 223 FDTLVTVGKQLEAICVKVTS-GETKGQEWPTSLLATVQPQSARQSQPPRGNSRLVGLHVT 281
+ V GK EA S G + PT T P AR+S R VGL
Sbjct: 138 AEETVARGKATEAPKRSALSAGARRDTSGPTP--GTPSPAMARRS---RAAGTEVGLPRP 192
Query: 282 SPQLLRVQPLV-------------RTEPQSCFLHQPPAQGFVQRP 313
+P P TEP +P A G +QRP
Sbjct: 193 APSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRP 237
>gi|6466466 RAN binding protein 3 isoform RANBP3-d [Homo sapiens]
Length = 567
Score = 43.9 bits (102), Expect = 2e-04
Identities = 63/212 (29%), Positives = 82/212 (38%), Gaps = 26/212 (12%)
Query: 4 YPWSAEPTDAEKRGGARAKATPPAPRPRPGGFRPPLQRARCYRAAGGRG--------RET 55
+P SA E A A A+ P P P P PP R R+AGG RE
Sbjct: 54 HPESAGEHALEPPAPAGASASTPPP-PAPEAQLPPFPRELAGRSAGGSSPEGGEDSDRED 112
Query: 56 GNAQGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPR 115
GN P + + ++ FP + +S G RL P + A S G P P Q R
Sbjct: 113 GN-YCPPVKRERTSSLTQFPPS--QSEERSSGFRLKPPTLIHGQAPSAGLPSQKPKEQQR 169
Query: 116 PAAR-----APE-GALASCGLRAGWAG--WPPQAAWRAWGASVDAAA--PPSEAA----S 161
R AP+ AL+ +G G P AS D AA PSEAA +
Sbjct: 170 SVLRPAVLQAPQPKALSQTVPSSGTNGVSLPADCTGAVPAASPDTAAWRSPSEAADEVCA 229
Query: 162 AEARLPERSGPARRPGPECVPMKAPGLAQAAV 193
E + P+++ + E K P QA V
Sbjct: 230 LEEKEPQKNESSNASEEEACEKKDPATQQAFV 261
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 43.9 bits (102), Expect = 2e-04
Identities = 82/305 (26%), Positives = 112/305 (36%), Gaps = 63/305 (20%)
Query: 47 AAGGRGRETGNAQGPRLALQAR-----AAAPAFPAASRRSVPAPRGRRLLL--PGAVAAC 99
AA A P LA A AAAPA AA+ + PAP + P A A+
Sbjct: 506 AAAAAAAAAAAAPAPALAAAAAPALAAAAAPALAAAAAPA-PAPAAAPAVAAAPAAAASA 564
Query: 100 AVSDGQPLSPPLRQ---PRPAARAPEGAL----------ASCGLRAGWAGWPPQAAWRAW 146
A S Q S PL Q P PAA+ P + S GL+A P Q A +A
Sbjct: 565 APSHSQKPSVPLIQASRPCPAAQPPTKFIKIAPAIQLRTGSTGLKAINVEGPVQGA-QAL 623
Query: 147 GASVDAAAPPSEAASAEA-----RLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWA 201
G+S P A A A L GP P V +P Q + TP+
Sbjct: 624 GSSFKPVQAPGSGAPAPAGISGSDLQSSGGPLPDARPGAVQASSPAPLQFFL--NTPEGL 681
Query: 202 PELC------PSSEARSPEPPANRLQDFDTL--------VTVGKQLEAICVKVTSGETKG 247
L S+ P+ +++L L G Q A+ + T+G
Sbjct: 682 RPLTLLQVPQGSAVLTGPQQQSHQLVSLQQLQQPTAAHPPQPGPQGSALGL-----STQG 736
Query: 248 QEWPTSLLATVQPQSARQSQPPR---------GNSRLVGLHVTSPQLLRVQ------PLV 292
Q +P L V P AR P+ G++++ V P +LR Q P +
Sbjct: 737 QAFPAQQLLKVNPTRARSGLQPQPQPAVLSLLGSAQVPQQGVQLPSVLRQQQPQPQPPKL 796
Query: 293 RTEPQ 297
+ +PQ
Sbjct: 797 QLQPQ 801
Score = 40.0 bits (92), Expect = 0.003
Identities = 41/135 (30%), Positives = 56/135 (41%), Gaps = 9/135 (6%)
Query: 83 PAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALASCGLRAGWAGWPPQAA 142
P PR + G +++ Q PL++P AA A A A+ A AA
Sbjct: 461 PPPRTQLPSSSGKISSGNSFPPQQAGSPLKRPFSAAAAIAAAAAAAAAAAA------AAA 514
Query: 143 WRAWGASVDAAAPPSEAASAEARLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAP 202
A ++ AAA P+ AA+A L + PA P P P A A AA A + P
Sbjct: 515 AAAPAPALAAAAAPALAAAAAPALAAAAAPA--PAPAAAPAVAAAPAAAASAAPSHSQKP 572
Query: 203 ELCPSSEARSPEPPA 217
+ P +A P P A
Sbjct: 573 SV-PLIQASRPCPAA 586
Score = 34.3 bits (77), Expect = 0.15
Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 11/114 (9%)
Query: 112 RQPRPAARAPEGALASCGLRAGWAGWPPQAA-------WRAWGASVDAAAPPSEAASAEA 164
+ P P + P +S G + +PPQ A + A A AAA + AA+A A
Sbjct: 459 KHPPPRTQLP----SSSGKISSGNSFPPQQAGSPLKRPFSAAAAIAAAAAAAAAAAAAAA 514
Query: 165 RLPERSGPARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPAN 218
A P AP LA AA P AP + + A + P++
Sbjct: 515 AAAPAPALAAAAAPALAAAAAPALAAAAAPAPAPAAAPAVAAAPAAAASAAPSH 568
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 43.5 bits (101), Expect = 2e-04
Identities = 65/246 (26%), Positives = 89/246 (36%), Gaps = 30/246 (12%)
Query: 11 TDAEKRGGARAKATPPA-PRPRPGGFRPPLQRARCYRAAGGRGRETGNAQGPRLALQARA 69
T +R A +A PP P P P PP A G A+ P +
Sbjct: 1174 TGTVRRRPASEQAGPPELPPPPPPAEPPPTDLAHLPPLPPPEGEARKPAKPP----VSPK 1229
Query: 70 AAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQ---PRPAARAPEGALA 126
P + P P +++ LPG + V PP+ P P A P A+A
Sbjct: 1230 PVLTQPVPKLQGSPTPTSKKVPLPGP-GSPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVA 1288
Query: 127 SCGLRAGWAGWPPQAAWRAWGASVDAAAPPSEAASAEARLPE-RSGPARRPGPEC----V 181
GL +G AG P A A PP+ A P + PA+ P P V
Sbjct: 1289 --GLPSGSAGPSP--------APSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHV 1338
Query: 182 PMKAPGLAQAAVAEETPDWAPELCPSSEARSPEPPANRLQDFDTLVTVGKQLEAICVKVT 241
P K P A AA A AP E SP A + + +T + L+A+ K+
Sbjct: 1339 PAKPPRAAAAAAAAAAAPPAP-----PEGASPGDSARQKLE-ETSACLAAALQAVEEKIR 1392
Query: 242 SGETKG 247
+ +G
Sbjct: 1393 QEDAQG 1398
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 43.5 bits (101), Expect = 2e-04
Identities = 54/176 (30%), Positives = 65/176 (36%), Gaps = 19/176 (10%)
Query: 59 QGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAA 118
+GP + + PA R +V R R LL P VA AV+ PL P
Sbjct: 61 RGPGRLQWTEVDSDSVPAFYRETVQVGRCRLLLAPRPVAV-AVAVSPPLEPAAESLDGLE 119
Query: 119 RAPEGALASCGLRAGWAGWPPQAAWRAWGASVDA------AAPPSEAASAEARLPERSGP 172
APE L S + A + PP A A AAP + A A A P P
Sbjct: 120 EAPE-QLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAP---AP 175
Query: 173 ARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEA--------RSPEPPANRL 220
A P P V AP A A P AP+ P A R EP A++L
Sbjct: 176 APAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQL 231
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 43.5 bits (101), Expect = 2e-04
Identities = 54/176 (30%), Positives = 65/176 (36%), Gaps = 19/176 (10%)
Query: 59 QGPRLALQARAAAPAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAA 118
+GP + + PA R +V R R LL P VA AV+ PL P
Sbjct: 61 RGPGRLQWTEVDSDSVPAFYRETVQVGRCRLLLAPRPVAV-AVAVSPPLEPAAESLDGLE 119
Query: 119 RAPEGALASCGLRAGWAGWPPQAAWRAWGASVDA------AAPPSEAASAEARLPERSGP 172
APE L S + A + PP A A AAP + A A A P P
Sbjct: 120 EAPE-QLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAP---AP 175
Query: 173 ARRPGPECVPMKAPGLAQAAVAEETPDWAPELCPSSEA--------RSPEPPANRL 220
A P P V AP A A P AP+ P A R EP A++L
Sbjct: 176 APAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQL 231
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,860,772
Number of Sequences: 37866
Number of extensions: 1045639
Number of successful extensions: 8595
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 963
Number of HSP's that attempted gapping in prelim test: 6851
Number of HSP's gapped (non-prelim): 2356
length of query: 317
length of database: 18,247,518
effective HSP length: 102
effective length of query: 215
effective length of database: 14,385,186
effective search space: 3092814990
effective search space used: 3092814990
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.